Array 1 18372-15108 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAACCA010000008.1 Corynebacterium macginleyi strain 06T638 HBRU110_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 18371 29 100.0 32 ............................. CTTGGTAAGAATTTCTTCCCGGTATTGTTTCG 18310 29 96.6 32 ............................G ATGCGAGATTGCACTCCTCATAGAAGCGTACA 18249 29 100.0 32 ............................. GCCCGTGGTGGTATCGAGATACATGTCACCGG 18188 29 100.0 32 ............................. GTGAAAGTAGCGACCGCAGCGCCCTTCGGCGT 18127 29 100.0 32 ............................. CGGGCCCTGAGGGTAAGCCGGGCAAGCAGGGG 18066 29 100.0 32 ............................. CCCTGGATTGCCTCGTTAAAATCGTCTTGTTG 18005 29 100.0 32 ............................. TCCCACTTGGAGCGCTCCCACAGGTGCTTCCA 17944 29 100.0 32 ............................. AGTGGGTGATAACCAATGACTTTGCCAATGAA 17883 29 100.0 32 ............................. CACGACGAGCCGGTTACCGGAACGTTGTCGCC 17822 29 100.0 32 ............................. CGTTCCAGACTGACACCCATGCAACGTTGCAG 17761 29 100.0 32 ............................. GGTTGGACTTAGAGCCTAAAAGCGTGAAACCA 17700 29 100.0 32 ............................. GCGCACGATGCCGAGGAATGTGGTGTGACTAC 17639 29 96.6 33 ............................A CCACGGGATTGTATCGAAGTAGTCATATGAATA 17577 29 100.0 32 ............................. AACCACCGAGTCGTACCGCTCGGTCAAGCATA 17516 29 100.0 32 ............................. CACCGCCGCGACGGTGAGGATGGTGTTGGCGG 17455 29 96.6 32 ............................G CGCTGGCTCGAAGAAGGCTTCTGCACAGGCCG 17394 29 96.6 32 ............................G CGTTTATGCGCTCGGTCGAGGGGGTCGACGGC 17333 29 100.0 32 ............................. AGGATGTGATGGAACATTTCATCTAGTGCTTC 17272 29 100.0 32 ............................. CGTGTGTACTTTGACAGGCAGTTCGGGCACTG 17211 29 100.0 32 ............................. GGGATTAGGGAATGCGCGGAGTGTAGAGCCAA 17150 29 100.0 32 ............................. GCGCTTCCCGTCCACACGTACAGGTCGCCATC 17089 29 96.6 32 ............................T GTTTGCCATGGTGTGAGTCCTTACTTGAGGTG 17028 29 96.6 32 ............................G ACCGAGACCGAGCTATCAGGGATGCTCTAGCG 16967 29 100.0 32 ............................. TTATCGGAGCTCGCGAAGCGGCGGGCATTCTT 16906 29 93.1 32 .....................G......G TAGTCATACGTCTCATTATTGCCCTAACCTGG 16845 29 96.6 32 ............................G TTTTCCAATCAGGTTGGCTACTGCTCCAATGA 16784 29 100.0 32 ............................. GCTCTGGTGGGCATGAGTCCGCAGGACCGTGG 16723 29 96.6 32 ............................G CACGGTCCAAGTCCTGCAGCTTCGACGACGAC 16662 29 96.6 32 ............................G CTACCGCAAGGCCCAGTAGGCCCCGCAGGACC 16601 29 96.6 32 ............................G GTGCACCGTCACCGGTCAAGTAAACGGGGTTA 16540 29 100.0 32 ............................. GAGCCAAGCAACCGGGCTCGAAGATCGCTTTG 16479 29 100.0 32 ............................. CGGACCCCGAGGCCCACGAGGAGAAAAAGGCG 16418 29 96.6 32 ............................T ACATCATCCAGGCTTAATGTCTCCCCCATCCA 16357 29 100.0 32 ............................. AACCCTATCCCATTCCCAGCAATGGGAGCAGC 16296 29 96.6 33 ............................G GATCGCTACGGGGATGAGGGGCCGAGCCTGTCC 16234 29 100.0 32 ............................. CGCAGCTATGGATTGGCTGAGGTTCATCTTGA 16173 29 100.0 32 ............................. AGCGTGAGGACATGCGCGCCTACCTCGAATCC 16112 29 96.6 32 ............................G TCGTGACAAACGAAGAAAATCTGAGACGCGGC 16051 29 96.6 32 ............................G ATGGGGTTGTCTAGCGCGGCGTTGCCGATGTA 15990 29 100.0 32 ............................. ACGTAGCCCGGCCCGCGCCGCTGTATCCTCGC 15929 29 96.6 32 ............................G TGATACGAGCGGTCGAGACTACCCATGCGGTA 15868 29 100.0 32 ............................. TCAGTCGACGTCAGCCGGGCCAGGCGGAACTG 15807 29 100.0 32 ............................. CCAGCTGTTCTAGTGATTGATGTGGATTAATC 15746 29 100.0 32 ............................. CGTTGGCGAAGTACTGGCTGCATAAGCACCCC 15685 29 100.0 32 ............................. ACCACATCGCCTTAAGCCGCTGTCATTCTTTG 15624 29 96.6 32 ............................G TGGCGAATGCGCTGCCAATTCGCAGCAGTCCT 15563 29 100.0 32 ............................. CTCACTATCACTACGGATTTCCTGCATGAAAC 15502 29 100.0 32 ............................. TAAATTCAGGCCCCTCGAGGGTCGAACCCCGG 15441 29 96.6 32 ............................G CTCGAGTTGTGCACGTCAGCCCAGAGTGCGAC 15380 29 96.6 32 ............................G CTCGGCAAGGCGGCAAGCGCATGGACAACCAA 15319 29 100.0 32 ............................. GTTGCCACGGAGTCTATCGGCGTGGGCTCTGA 15258 29 100.0 32 ............................. CAGCTTGATGACTTGAACGCAACTTTGGGCAA 15197 29 96.6 32 ............................G TCCGCGATGACGTATACGGGAACGCCGACATC 15136 29 86.2 0 .......................A.AT.A | ========== ====== ====== ====== ============================= ================================= ================== 54 29 98.4 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : GCGAACTTGAAGTCATCGCTTCCGGTCTTAACTGGGCAGAAGAGGACACGCTGTCATGATGGTGCTGGTTGTTACTGCTTGTCCCGCTGGGCTACGGGGCGATCTGTCGAAGTGGCTCATTGAGCTGACCCCCGGTGTATTCGTCGGACGTCCTTCTGCTCGTATTCGTGATTTGCTCTGGGAGCGTACAACCGAGCTTTGTAAAGATGGGCGTGCACTTATGGTGCATTCAGCTGCGAATGAGCAGAGAATGGAGTTCAAAACTCACCGACATCATTGGGAACCCACGGATTTCGACGGGATTACCTTGATGAGGCGGCCGGCTAAGTCTAAGCAAGCACCGCGAAAGACTGGGTGGTCTCAAGCCCGACGTAACCGTAATTCTTATAAGAAACAGAAGGGCAGGTAGTAGGCCGCGCGGAGCTTCGGCAGTAGCTTCCTTAAATTACAAGTTGTACGTAGAATTGACCTAAGGCTCGAATTTCTGCTGTTCAGCAAGA # Right flank : CCTTGTTTTGGTAGCCCGAATCTACTGCTGGGCTTAGTAATCAAGATATCGTAAGGCCATCCAGCAAACAGGTTCGTCGCTTGACTGATGAGAACGGTATTCATTCCTGCTGATGCTCCACCGTCGGCTGCAGCCGCAGCATTGAACGCCATGTTCGACTGATACTGTCCTATGCCTGTGACACTTGGCTCAAGTAGAAAACCGTGCGACGCAACTTCATCGATGTGAATTTTGGTTCGCGTTTGAGCTAAGCCGAATTGTTCCGGCGGCTCCGTTCGAAGTGAAAAGGCGTGACTAACCAGCAAGAGTTGTTTCTCGTAGGACCGAGAATTGGTCTTTCGCGAGCAATTGACTAGTCTTTTGAGAGCGGGATGTCGTAGTCTACGACATGAATCCCGCGTGGGGCTATAGCTCAGTCGGTTAGAGCTCCGGACTCATAATCCGTCGGTCCCGGGTTCGAGCCCCGGTGGCCCCACGGTAGAAGGAGGCGTCGGCAAGCA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.99, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //