Array 1 12473-12684 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIST010000071.1 Enterocloster clostridioformis strain MSK.2.78 NODE_71_length_15493_cov_120.534, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================================================ ================== 12473 32 100.0 28 ................................ GGTCTAAGTAATACCACTGTCCTCCCAG 12533 32 87.5 28 CCT............................C CGTCCAGATAATACCATCTTCCATTAAT 12593 32 81.2 28 ...............CT....TT.A......C CGTTCATATAATACCATTTGCCGTTGAT 12653 32 78.1 0 ...............C.T...GATA...T... | ========== ====== ====== ====== ================================ ================================================================ ================== 4 32 86.7 49 GGCCTGCCAGCCGGTGAGCATAGCGCCGCTGG # Left flank : TGACCGTAATACCTTCAGACAAGCGCTTTCCCAGGGCCAGACGTGTCCCGCGCACCTTGATGATAACGCTTCCGCTGCCTTTCTTATTCAATATATTCACCGGCGTCCCCTCATTGACCCCCAGGGCCTCAAGACGTCTGGTAATACTCTCATCCACTTGCACGCCCGATACTACATACCGGCCGCCGATTTCACACTCGTTCAGCTTTTTCTGCATTGCTGCCTGTCTCCTTTTGTAGTTGCATTTTAACCATATTCATTGTATGCTTATTGCGAAAAAATGTCAATAAAAAGAGTTTGTTATGACAAACTCAATTTCAAAAAAGAGGATGCAGCGAATCTCTCCGCTGCATCCTTTCTATACGTTTCGGTTCTATTAATATTGATTTTAGGCTTTACTGCACCCAAGCTCCGGAACCATCCACATATTTTCCATCCGGCGTCCATGTATTATAATACATGGCTCCGTTGGTGCCCAGATAGTAGTACTTGCCATTGAT # Right flank : GACGGATTCAGATAATACCAGGTTCCGTCCAGCTTCTGCCAGCCGGTGAGAATATAGCCCTTGTTATTAAAATAATACCATGCGCCGTTAATCTGCTTCCAGCAGGATGCCGGATATCCGCCTGTATCATAAGCATACCACACGCCTGTACCGTCCTGCTCCCAATGCCCGCTTCCGCCATAGCGGCCAAGCTCATCCTCATCAATATACAGGGAGCTGGAATCCTCGGACCATTCACCTGTCTTATTGTTGTAACGGGAAATGGCCCTTACACGGAAGGTATAGTCTCCTTCCCGGTTAAAATAGCCTGCAAAGTTATAGGAGGTTCCTGTGGTGCTGACCGTAGTGACTGTCTTGTCGTCACGGAGGAGTTTCACATCGTAGCTCTTAGCGCCCTCAATCTCCTCCCACTCAGCCGTGGTGTCACTCCACTCCAGATCCGACGCGCCCTGAAGCTTACCGCCGATACGTTTTAGCTCAGCATACACCTCAATGTACTG # Questionable array : NO Score: 3.39 # Score Detail : 1:0, 2:3, 3:0, 4:0.34, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCCTGCCAGCCGGTGAGCATAGCGCCGCTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTGCCAGCCGGTGAGCATGGCGCCGGAGG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 18226-19607 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIST010000019.1 Enterocloster clostridioformis strain MSK.2.78 NODE_19_length_79609_cov_153.749, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 18226 33 100.0 35 ................................. GGACCAGCGCATCCATCTCAGGGTATCCTCTCCTC 18294 33 100.0 33 ................................. CCCCTCCATGGTCAGGGCTTCCAGGCGGATGTC 18360 33 100.0 34 ................................. TGGAGAAACAGTCGGAGTATATCTCCTGCGAGGG 18427 33 100.0 34 ................................. CTACAGGAACGCAGGAGCCGGCCATCCAGGAGGG 18494 33 100.0 34 ................................. ACTGCAACACTATCACAATGCCAAACTCCGACCA 18561 33 100.0 34 ................................. CGTATACTCAGACGGTCAGTGTACCGGGAGCAAA 18628 33 100.0 35 ................................. TGCAAAGGATGGAAAAATGCAAGAGGTTGCCGGAT 18696 33 100.0 33 ................................. CTAAAAATAGGTATAAAAAATACAGCTCCGCAA 18762 33 100.0 34 ................................. ACACTCATGTCGAAAATCAACATCCTGATAGTCT 18829 33 100.0 35 ................................. TGTGTTAGAAGATGCGAAAGTCTATGTTGGTTGGG 18897 33 100.0 35 ................................. TGTCCGGTAGACTTATATATATACTGCATGGGACT 18965 33 100.0 37 ................................. AAAGTTGGCCTGTATCTCAATCATAAATCGCTCCTGG 19035 33 100.0 34 ................................. TCCGTGATATTCGCAACCTCACTGGAATCCGGGG 19102 33 100.0 34 ................................. CTCGCTCCCAGGCTTAGCCTCGTAGCTGTACACC 19169 33 100.0 34 ................................. ATAGCCTGTGCCACCTTCCACCAGGGAAGGCCGT 19236 33 100.0 35 ................................. ACAATATGCAAACAAGGTAACGTTTTTTGATACCC 19304 33 100.0 35 ................................. CTGTTCTCATGGTTCTTTCCTTTCCGATTCTTGTT 19372 33 100.0 36 ................................. TGCCAAACTGACCAATTACCGGATTGAGCAGCTAGA 19441 33 100.0 34 ................................. TTTTTTAGTCCCTGGTGAGGAGCCCGGCTGGAAA 19508 33 100.0 34 ................................. ATCCCTCATTGCCTGGAACGCGTCTCTCGCCGTA 19575 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 21 33 100.0 34 GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Left flank : CTGGAATTTCCGGAGAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAAGCGGGAAATCTGGCAGCTGTAATGGAACGCCAGGGCAGGGTATTGCGCATTTACGATGTCAATGATAAGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCTATATATCCGGAACAAAAGAGGCTTGTTTTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCACTGCAGCATGCGGGATATATGCGTGAAATGAAGGATTATGTAGTGTATAAGTAGAGTGTGATTTCTGTGAGGCGGAATCCCATCAAACCAGGTGCGAATGCCAAGCTAACATGAAATGTCCGGGAGATTCGCACCTGAAAAACAGAGGAAAAGCCGTGAAAATAGGCTGGGTGAATGGATGGAGGAGGTTGAAATAAGGAGGGGGGGGGGGGACATAATGCATAAAAAGTTAGGGGGATGTGGAGGGATTGTTGGATAGTTTTGCT # Right flank : TATAACATGCTTTATATACATATGCTTTTCCTTTCCACCACTGCTGGATATGTGGTTTATTTTAGCTGGCCGATTTCGTGATAGGCCTCCAGAATACCATTTTTGGCTGCTTTTTATACAGTATCAATATCAACCCAATACCAACACTAACCCAATACCACCCCAATACTAACACCAATTCTTAATCATGCAGAACCATTAGGCAATTGCGAAACTCACTGACCAGAATTTATGCACATCGTATAGGAATGAATCTAAATTGAATATATTAAGCAAGATATTTTGTGCAAGGTGAATATAAAAATTCAGAGTTTCGCAATTACCTAATGCAGAACCATTTCTGAAAGGAGAGGGAAAAGCCATGAAACAGATGTCATTATTCGATGACAGAGAAGTATACAATCCCCTGGCCAGCAGGCTGCGTCCGGATGACCTGGATGGATTTGTGGGACAGGAGCATCTTTTGGGAAAGGGGAAGCTGCTGCGCCAGCTCATAGAGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.00,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 123777-125802 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIST010000002.1 Enterocloster clostridioformis strain MSK.2.78 NODE_2_length_339712_cov_187.194, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 123777 32 100.0 34 ................................ TCTGACGCTCTGAGTTTTCCAAATATTGGCTCTT 123843 32 100.0 35 ................................ TACCTTACAGGCGGAGAATCAAACCCTTAGATTCC 123910 32 100.0 33 ................................ GGATATGTTAAGCAAAGCCAAGGACTTAAACCC 123975 32 100.0 34 ................................ ATCTTCAGCGGTTCGTACCCATTGGGCTGGTAGC 124041 32 100.0 34 ................................ TTCTGTTTTGACATAATCTTGTCCTCCTTGTTTT 124107 32 100.0 33 ................................ ATCACTCAGTGCCTGGAATGCGTCCCTCGCCGT 124172 32 100.0 34 ................................ ATACGGTATCTCTCCGCTCTCGCACATCTCATGG 124238 32 100.0 36 ................................ CACCTGGGCCGGGGCCATGGATGCAAGGTCCAGGAG 124306 32 100.0 34 ................................ CGTCAAGTATGTCGGATGTGGGAAAACAGGCTAT 124372 32 100.0 35 ................................ CCCCAGGCGGGTACCGCAATGGTATCCAGTCATGA 124439 32 100.0 34 ................................ ACCCGAGATGTCCAGAAGGTTACTTTCCAGCCTT 124505 32 100.0 35 ................................ ACAAACCTTAAGGTCACTGCTTACAACGCTTATGC 124572 32 100.0 36 ................................ ATATCTTTCCCTTTCCGCCCTTCCGGGCAATAAAAT 124640 32 100.0 35 ................................ AAGCGAGTGAATTAAGAACAGTAAAAGTGCGCAGA 124707 32 100.0 34 ................................ ACAAAGATGACCACGCGCCTGCGGGATGGTGGAT 124773 32 100.0 36 ................................ TACCTCTAACATCATAAAGGTAAGGGTGCCCAAACA 124841 32 100.0 34 ................................ AAAGTAGTAGTAGACTTAGCATGTCCCAGGATAC 124907 32 100.0 33 ................................ CCTACAAGGAGCGCATTATATACTCTTGCTTGA 124972 32 100.0 34 ................................ TGTACTGAATAAGAGTAATACCCCCGCTTGCCAC 125038 32 100.0 34 ................................ CTCGAACCGAAACGCCTTTAATGTCGCCGTCCCC 125104 32 100.0 35 ................................ TCCACAATCTTGACAATAGTCTTGCCCCATCTCAA 125171 32 100.0 33 ................................ TTGTGCAGTATTTCAATGCGGTGTTTCTGGTAA 125236 32 100.0 35 ................................ GCTATTATCTTTTTTACCTCACTTTCGCTGATTTC 125303 32 100.0 37 ................................ CCTTCCTGGCCGTCCTGCCCTTCCTTGCCTGCCTGCT 125372 32 100.0 35 ................................ ATCATGCCGTTCGTGATTCCCACGCCCGCCGCCGT 125439 32 100.0 34 ................................ CCTCACGTGCCCGTCCCCGGCCGTCTGGTACTGC 125505 32 100.0 34 ................................ ATCCATTAACTGAGCCGCAAGCTCACCCGTCTGC 125571 32 100.0 34 ................................ AGACCAGCAGACGGCCGATTTTATCAATTGTGTC 125637 32 100.0 36 ................................ ATGGACATGTACCGGCTGGCCGTTGACTGGCTTATG 125705 32 100.0 34 ................................ CGCAATCCGCAGTGCACCTCTGGCATCCGTAATC 125771 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 31 32 100.0 34 GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT # Left flank : TGCTGGTACTGATTACATATGATGTGAATACGGAAACCGCCGCAGGCAGGGCCAGGTTGAGAAAGGTTGCAAAGCAATGTGTCAATTATGGCACCCGCGTCCAGAACTCCGTATTTGAATGTATTTTGGATAATGCCCAGCTGATAAAGCTAAAGGCGATACTGACAGATATAATTGATGAACAGACGGACAGCCTTAGGTTTTACAACCTTGGGAATAAACACACTACAAAAGTGAACCATGTTGGGATGAATAAGGGGATTAATGTGGAAGAACCGCTGATATTCTGACCTGGCCGCGGGCGGTAAAGCGGTATAAAGTATTTTGGTGCGAACCTGAAGCAAACATGGATTTACGGGGAGATTCGCACCGGAAAATTTGCACAATGAGAACGGATTTGCGAGTGTGCAGGGATGGTTGGCCGTGATTTGAGGGGGTGGGATATGATTTGTTTGTGGAAATGTGTTGAAGAATAGTAGTGGTTATTGTGTAGTATTGCT # Right flank : TTCCGGGGTAGTCTCATAGCCGTTCACATAATAGCGTCTCCGCTCTCGCGTCGGAGCAAGTTAAAAATCCGCCAATTACAGAATTACATCCAGTTGCCCACTCCTCTGCCCTTTTCGCAAACGCCGCAATCCCTTTTGAACTGCAAAAAAGGTTAGGTAAAACTAATTCCGTACAACAAAAAAGATGGGGCAAGCCCCATCCCTTCCATAATCTTGTTAGAATGTACAAAGAATGCATACTTCCATTATCCCTTCCATGCCCGAATCTCTTTAAGCCCCGGCACCAGCACCTTAGCGCTGGTTTCCAGAATGATCCGTCCCTTTTCAGCTGTGGCGCCTGAGGGGTCTCCGCCGATTCCGATGGGTTTGCCGTCTGCTGTTTTCCAATCCTCGGATACCCAGCCAATGGATACATTTCCGTAAGGTTTCAGCGCCTGATTGTCTTTAAATGCAGTGGGAATTCCTGCCTCTGAGGTCTCTGACTTTACCAGGGACGGGTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.40,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //