Array 1 78596-78364 **** Predicted by CRISPRDetect 2.4 *** >NZ_JWDR01000029.1 Streptococcus anginosus strain 1080_SANG 104_354388_14174975_63+,...,59_, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 78595 36 100.0 29 .................................... TGAAAGCAGCTTGGAAAATGTTCCGCAAC 78530 36 100.0 29 .................................... TTGTCAATAACTAGTGACCCCACGCTGTA 78465 36 100.0 30 .................................... ACAAAATTGTTGATACTAAATTTGTAGAAG 78399 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 100.0 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC # Left flank : CGATTACTTGAATTATTGCTCATTTGTAAAATGTTGCGAGCAACTAGAGGAGATGGCCGACAATTACAGTAATTTTAGTGTCATTATTTTCCCGTCAAATGAAGGCTATCTTTATTTGAATCGCGAGAATATGGAATACGTCAATATTGTTTCTGATTTGGTTGAACATTTTTATGAATTTTCTTTTATGTATGAAAGGTTTATTGGTCAATATCCTACTAACGACGTACCTACAGAAGATGATTTCATCGTCTCTTTGCAAAAGATTTCACCATATTTATTTAGTAAAGACGTGACACATATGAGTTTATCTATCCAAGATATGGTAACCTTGAAAATTATGAACAGTTTATACCATTACAACAAGAAAATTCATTTTGCTTATAATCCACCTACTCAATTATTAATTAATTTTTTAAAAAATTAAGATTGACAAGCTCATCAAAGGACTTTATAATCAATGTAAGGGTACAAAAATCAAAAAATTTTTTAATTTGAGG # Right flank : GTAGTATTAAAGTCATAGAACTCACGTGAGCATGTTTGATGTAAAAGAAATTTAATGAAATAGTTATCTGAGTAATACATTAGCGGAATTGTAATTTAGGCTGAAATGGTTTATAATGAAAAGTAACAAGTATATTAGGAGGCCGTCTAATGGAGAGAAAAATTAAAAAATCGGTAGTTGCGACCGGTTTAGCTGCAACCACTATTATTTCAGGCAGTTTATCACATCAAGTAAATGCCGAAGAAGTAAAAACACAATCTACTGAGCCAAAGACATCTGAAAAAATCACCAAACCAGTTACAGAAACAGATGTTCAATCAGCAAAGCTGCAAGCCGATGCTGCAAAGGTTCAAACAGATGCTCAGCAAAAAGTTGTAGAGCAAGTCAAAGGAGATGTAAATACTTCAAAGGACGCGGTGGCAGATAGCGAAAAAGCTGTTGCAAATGCTGAGGCAGAAAAGAAAGAAGCAACTCCAGAAGTTATTGAAACCGCAAAAGAA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 21180-19890 **** Predicted by CRISPRDetect 2.4 *** >NZ_JWDR01000001.1 Streptococcus anginosus strain 1080_SANG 0_109331_4401222, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 21179 36 100.0 30 .................................... TCAGCTCTTAGATTAGCCATGCACACCTCT 21113 36 100.0 30 .................................... AAACGTTATGATAATGATTTTCAAAATATA 21047 36 100.0 30 .................................... GATAGGTGACGGACTACATGCCTATGCTAT 20981 36 100.0 30 .................................... TTTGTAGTTTTTTAGGATCCTTAATTGATG 20915 36 100.0 30 .................................... ATCAATTTTTTCATTTGGAACATACTTTAG 20849 36 100.0 30 .................................... TCAATACATCTTATCAATTGATACGCTTTC 20783 36 100.0 30 .................................... TTCCATTCTCTCAAGTAGTCTTCTATTTCA 20717 36 100.0 30 .................................... AAAAAAAATCAAAATGATGAATGTCGATAC 20651 36 100.0 30 .................................... TGATTTAATTTCATAACCTCGTAGCTTTCA 20585 36 100.0 30 .................................... AAAAGCCAGATGAAACAATGCACTGTTTGA 20519 36 100.0 30 .................................... TGAATAGTTCCTGGAACATCTTCCACAGCT 20453 36 100.0 30 .................................... GCGTTTTCCTGTTTTAATATAGTGTAAAGC 20387 36 100.0 30 .................................... TATTAGTATTTTACGCTCAGCACGTGTCAA 20321 36 100.0 30 .................................... TTTGACGCAAAGGATTTAAACTCTGACTAC 20255 36 100.0 30 .................................... GATTGAATTGCGTTTGTAACTGATTTACTT 20189 36 100.0 30 .................................... ACCCTCAATAACAATGACAATCGTCTTAAT 20123 36 100.0 30 .................................... CAATGTTTCATTTTAAAATCCCAACTTATT 20057 36 100.0 30 .................................... TGTATTTTCTGAAATAGCCAATTGAAAATT 19991 36 100.0 30 .................................... TTGCGAGACGTAACGGGGAATCGTCGCTTT 19925 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ACAGTTGAATGAAAAGCCTGAAGTGAAATCTATGTTAGAAAAACTAGTTGCAACTATTACAGAACTAATTGCTTTTGAATGTTTAGAAAACGAGCTGGATTTAGAGTATGATGAAATAACAATTTTGGAATTGATTGATGCTTTAGGTGTAAAAATTGAAACACTAAGTGACACTGTTTTTGAGAAAAGTTTAGAGATTGTTCAGGTGTTTAAATATCTTTCTAAAAAGAAACTGCTTGTCTTTGTGAATGTATCATGTTATCTGTCTGAACATGAACTAGCTAAATTGGTAGAATATATTCAACTTCATAATATAAATGTACTGTTTGTTGAACCAAGAAAAGTATACGACTTCCCTCAATATGTAGTGGATGAGGACTATTTCTTATCTTGTGAGAATATGGTATAATATTAGTAAATATAAGGAATCATTTGAGCTGAAGTCTAGCTGGGACGAATGGCGCGATTACGAAATTTCGAGACAAAAATTGGTCCACGAG # Right flank : TAACCTATTCTTTTCTTCCAAATTCCCAAAATTCCCAAAAATTCAGACACAAACCCATCTGATTGTAAAGCTTGCAATTTTTTTTAATCGTGCTATAATATTTCTTAGAGACATACCGCTGGTTGGAATTTTTTAGAGAGCGCGTGGGGCTGGAAAGCGTGTAGAGGAAGGCAGTTGGGACTACTCTAAAGTAACTTTTATGCAAACATAAAACGGTGGCTACGTTAAAGCCAGTCTGAGGTGTAGGTCTTTTTGATATGCACGAATGAAGGTGGAACCACGTTGCGACGTCCTTTTATGGATGCCGCTTTTTATTTTGTCAGAAGGAGGAAGAATTATGCTTTATATGATTGGCGGATCGCCTTGCAGCGGGAAGTCAACAATTGCTTCACTTCTCGCTAGACAGTATCAGCTGCTTCATATCAAGCTGGATGATTTGGTAGACGAGATGATGAGTCAAGCAAGTGTAGACTCACGGCCGATTTGCCTTCTTAGACAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //