Array 1 189039-188282 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AXDY01000006.1 Staphylococcus simulans UMC-CNS-990 SSIM990Contig06, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    189038	    36	 100.0	    29	....................................	TGGACCAGCTTAAAGACGGTATTCTCTAA 	
    188973	    36	 100.0	    30	....................................	AAGGCTCGACTTTGGAATTAATCATGTGTA	
    188907	    36	 100.0	    30	....................................	GTAGAATTTGAAGCGGAAATTTCAGAAGCA	
    188841	    36	 100.0	    30	....................................	TGCTTCAAAGTCCATTCCCAAAACATGAAA	
    188775	    36	 100.0	    30	....................................	TTTATGTATTGATTGTCATAACATAGAACA	
    188709	    36	 100.0	    29	....................................	TCGTATTTATCATACAAATAGTATTCTTT 	
    188644	    36	 100.0	    29	....................................	AATCGAAAAGAAATATAAATTGTATGTTT 	
    188579	    36	  97.2	    30	................T...................	TATCTCGTTCGTTTCGGTTTTGCTTGTTTC	
    188513	    36	 100.0	    29	....................................	ATAAGTGACTTCAACGCTAATGCTGTTAT 	
    188448	    36	 100.0	    30	....................................	TTCATCTGACCAATATTTAAACGTGCGTTT	
    188382	    36	  97.2	    29	.............A......................	TTTTGCAATGCGTGCTGCTATATATGCTT 	
    188317	    36	  88.9	     0	............................TT....CA	|                             	
==========	======	======	======	====================================	==============================	==================
        12	    36	  98.6	    30	GTTTTAGAATTGTGATCTTTTAGAATGAAGTAAAAC	                              	       

# Left flank :   AATATTGTTTTGAAAAAGTTGCTTGGCATGTTTAAACCAGACTTTCATAATGATTTAGATGATTTAAATGTGATAGAGCAACGCAAATTATTTATAGACACATTAACATCAACAGAAAAAGAAAATGTGTTGGTTTTGTTATTTCCTGAAGCTCATTTAGGGCTTTCGGATATGAAGGCATTTAAAAAATATCTGCAGACTCTAAATATGTTTAGTATTATTGTTACGAGCCATCCTTATTTTATTATCGAGTCAGATACATTAGCGCTTATTAAAATGAATGGAGAACCGATGAATACTCAACAAATAAGAGAAGAGTTATTGTTGTTTAAAGAAAAAGAATCAATAACTGATTTGGATAAGACAAGCAAAATGATAGCTTATCATGAATTTTGTCAACATCCATATCTAGATGATGAGTTCTTCATTCAATTTATGAACAAATATTAGTTTACTGTCATTATAAAGGTCTCTAAAGTCTTGATTTCTCGTTGTTTGAG
# Right flank :  AGCGGGTATAACTTAACTATTTATCATGCTTGTTTGAATTGAAAAATCTTTATATTTGTTTAGGAAATACCTTTGACTTTTCATCTATCTGTGTTAAACTTAGTACAGTTTAATAAAGAAATCGTAAGTCTTTAATTGAGAGTACAGAGATGCTCCGAAGGCAGATAATTTACATGTTGAAACTAGAGAAAGTAACTAAGTAAACACTTTATTAAGAGGTAATTTTGTATGAACACGCAATTCACCAACCCTGATTGCCATACAAATTTAGTAAAGTAACCGACAAAACAGTTACTGATTTAAATAGTTGAGATAGTAAATCTCGCATGTTCTTCGTGTCCCGTGTCTCTCAATTGAGATACGGGATTTTTTTATGGAAAGGTGAGTGCGGGAATGACAGAACGTATTGTATTAGATGATGCAGGCATGCAGCGGACTTTAACACGTATCGCACATGAAATTCTAGAGTATAACAAAGGTACTGAAAATCTTGTGTTGCT

# Questionable array : NO	 Score: 3.19
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAATTGTGATCTTTTAGAATGAAGTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [0.00,-1.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.78   Confidence: HIGH] 

# Array family : NA
//