Array 1 400-1286 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CMZG01000029.1 Neisseria meningitidis strain NM2382, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
       400	    36	  94.4	    30	........G...A.......................	TTTTTGTATCCATTCCCAGCCGGAAATTAA	
       466	    35	  97.2	    29	.............................-......	TCGGCCGCTTTATTTCTGCCATATCGACG 	
       530	    35	  97.2	    30	.............................-......	TTTGGTAAAGGTTTCTGTTGCGACCCGAAT	
       595	    36	 100.0	    30	....................................	AGTATTCGTCGATGATGGAAACTCGAGCAT	
       661	    36	 100.0	    30	....................................	AACGGCAACCCACTAAATTTTGCAAATGCG	
       727	    36	 100.0	    30	....................................	CCTATGCCTGTTATTGTTTTCAGCCTTTTG	
       793	    35	  97.2	    30	.............................-......	AAAACCAACCGGGTATTCATACACAGCCAA	
       858	    35	  97.2	    30	.............................-......	ATGATGCAGGCTGCTCCGTCATCGTCTGCA	
       923	    36	 100.0	    30	....................................	TACCCACGGCGGAAACCATTGCCACAAAAC	
       989	    35	  97.2	    30	.............................-......	TTTTGCCGTTTTCATCCGGCTTGAACATTT	
      1054	    36	 100.0	    30	....................................	TCCTGCCAATTATCATACATAAGATTTTGC	
      1120	    35	  97.2	    30	.............................-......	TCCCGACATTGACGGAAAAACCCGAAAGCA	
      1185	    36	 100.0	    30	....................................	TTATGCCGTTTTCATCCGGCTTGAACATTT	
      1251	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        14	    36	  98.4	    30	GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	                              	       

# Left flank :   TTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTGG
# Right flank :  TACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGT

# Questionable array : NO	 Score: 6.03
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:51.72%AT]
# 	Reference repeat match prediction:         F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.68   Confidence: HIGH] 

# Array family : NA
//