Array 1 3077632-3078123 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP024154.1 Echinicola sp. 20G chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 3077632 30 96.7 36 ........C..................... AAAAGAATCACTTAAACAGCTATGGAAAGATAAAGG 3077698 30 96.7 36 ........C..................... GAGGACAGGGCGCGAGGGTTCGCAAACAACAAACAC 3077764 30 96.7 36 ........C..................... ATGCCTGATCAGTTGGCCTCACCTTCTCAATTCCCG 3077830 30 100.0 36 .............................. CACCTAAGAGGCAATGTTGATGGCCTTTCATGGAAT 3077896 30 100.0 36 .............................. ACAATTCGGAATTATCATCTTGTTTTATCTCAGATT 3077962 30 100.0 37 .............................. TTTTGACTTCCTGAGTGTCCCAGACAAAAGCCTCCAA 3078029 30 100.0 35 .............................. ATACCTGTGTAGATCCGTCCTGATCAAGGCCAAGC 3078094 30 96.7 0 ........C..................... | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 98.4 36 CCTTTAATTGCACCAGAGTGGAATTGAAAT # Left flank : AAAAGTTTAACTGGACACATTTTTATAAGAATAATTGTGAACAGATTTTAGAGATGCGTGAACATAATGATTTGATTAAAAAATGGAAATTCATTGGGGAGAAGTAGAGAAAATCTTACCCGCCAGGGTTAGTATGTCACTTCACCTTGATATTCTGGAGATTTGTAATTCTTACGGATTAATTTGGTGAAATGACAAGTATAGAGTGGGCTCATTTGGTTAGCCCTTTTACTATTCTTTATATTGAAAACATTTTCAATTGGCACTTTTGGTCATTCTTTTGCATCGGCTTCCTGTTTTGGTAGTACCCAAACAGCGAACGGAAGTAGCCCTCGGTTGGGTGTTTGATCAGGTTTTAGTTTTGTAACAGGACAGTTAAAGTATCGTCGGTCATAAGGGAAAATTCGGCTATTGTAGGTCGACGATTTTTATTTTAAATGGTTATCAATAAATATGGGATAATAGCTTTTTTGAGTATGTTTTCCAAGACAAAAAAATGG # Right flank : TACTAGAAGGCCCTTGGGTAGTCTTAGCCACCTCTTGATTGGGTCAATTTTGAAGGTCGGTTATAAAAAATACCATGATTTGGGTATTTTTTTAAGTTTTGATATCCTCTATTTTGGAGATATTAAATTACTAAGCTTTTAGGACAGTTAGCGTCAATGCAATATCAGTTTTAAATTATATTTTCTAGCTTAGTAAGCATTAGGAATAAACTCAAAATAGATATGATGCAGTTTTTGGTCCATTTGCATAGAATGGGTAACAGTAACTTTCTTCCCTTAAACTATCAATACGAACTTTCCTCGGCCATCTATAGGATACTTGAAGAGGCTGATCCAGCCTATAGCCATTTTTTACATCAAGAAGGTTTTGCCTTTGGAAACAAAAAATACAAGCCCTTTACCTTTTCTTTTTTGGAGTTTGACCGATTCAAAATAGTGAAAGGGCATAACCGTCTTGAACATATGGGATCACAGGCTGTTTTGGATATTCGCTTTGCTAT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTTAATTGCACCAGAGTGGAATTGAAAT # Alternate repeat : CCTTTAATCGCACCAGAGTGGAATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 2 3087952-3091143 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP024154.1 Echinicola sp. 20G chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 3087952 30 100.0 36 .............................. TAATTTTCAACAGGTTCAGCGGCCAAAAATTGGGCA 3088018 30 100.0 36 .............................. TAAAATCATGAAGTTGGTTTGTAGGTGTAAAAATTG 3088084 30 100.0 35 .............................. GCTTCAATGCCGCCAGTTTCATTTCCTGCTCTGGT 3088149 30 100.0 36 .............................. CAAATCGTTAGAAATGTCCCCTGAGCGTCTGGAAAA 3088215 30 100.0 37 .............................. TGGTATTTCATTAGGAATTCAGGTTTAACTAAACCAA 3088282 30 100.0 36 .............................. GTACCATTATGTACTTCCCTTTTGTGAGAAATTGGG 3088348 30 100.0 34 .............................. AATGAAAAAGGAAGCATCCAAGTACCTCTACAGT 3088412 30 100.0 36 .............................. TTTGATCTTCATGTATTTCACACGAGATATTAACAG 3088478 30 100.0 35 .............................. TTTGGCGTGCTACAGTCATAAGTTTGAAGTTCGCC 3088543 30 100.0 36 .............................. CAGGCTTTTGCCGCCGATCACGCTAATGAAACTATT 3088609 30 100.0 36 .............................. AAGGGATGAGGTGTTTGAACTGTCCTGGAATGACTT 3088675 30 100.0 36 .............................. AATGAAAAAGGAAGCATCCAAGTACCTGTATAGCGA 3088741 30 100.0 36 .............................. GGAGAAAACCGCTACTGATGGACTATCAGAAGCTAA 3088807 30 100.0 35 .............................. CTGGCAGAGAATACCGATCTGGAGGGTGATGTGAT 3088872 30 100.0 37 .............................. AAACTTACCTGTTGGCATTGTCCATCCATCTGGCTTT 3088939 30 100.0 36 .............................. TTATATTTAGGAATGATGTTAAATAATAAAGCATGG 3089005 30 100.0 37 .............................. CAGGCAATATTGAAAAAAAGGGCAAAAGAGAAGGCCG 3089072 30 100.0 37 .............................. ACCACTTGTAGTCTTCTGATACTTTCCGTCTGCTCTA 3089139 30 100.0 36 .............................. TGATTTTGTAGCCTTCATGAACGGAAGAAAAGGATT 3089205 30 100.0 35 .............................. CTTACAGGAGGATGGGGAACTGATGATCTCCGTTC 3089270 30 100.0 36 .............................. GAGATCCCTGACTTCAATACCTGAAGGATTCAACCC 3089336 30 100.0 38 .............................. CTCATATAAAAAGTGTTTACTCAAATAAGGGTAAACAC 3089404 30 100.0 36 .............................. AGGCAACAGAAATGGCAGATGGGCTACTGGATGACA 3089470 30 100.0 37 .............................. AGACTCCCTGACTTCAATACCTGAAGGATTCAACCCT 3089537 30 100.0 36 .............................. TCGGATAACTCATATTGATATTTGGCAGTGTCGTAG 3089603 30 100.0 36 .............................. CTGCGGATGGTAACTATAAGCATATCTACAGCATGA 3089669 30 100.0 35 .............................. CGGTATGTTCGCGGCCATAGTCGTGTCGGATTTTT 3089734 30 100.0 35 .............................. ACTGAAGTTCTATATGGAAGTTTGTCTGTATCTAC 3089799 30 100.0 36 .............................. TCAGATCAAATACCCCGTCTTTGTATTTAGGAAGTG 3089865 30 96.7 35 .................G............ GAAGCTGCTGAGCCATCACCAAAAACCAGTGTCCA 3089930 30 96.7 36 .................G............ AAGGTTTAAGGCCTTGGAATTCAGGAAAGGACTTTG 3089996 30 96.7 36 .................G............ TATGATGTTATAATCCTTTACTTCGAACAGCTTAAA 3090062 30 96.7 36 .................G............ TAGTCTCCAGGAGCAAATCAGACTACAGAGCATTTT 3090128 30 96.7 36 .................G............ ATACTAAAGCACTCATTTAGCCCCAAACAAGCAAAA 3090194 30 96.7 35 .................G............ AGGGTTTATACCTGATTCCGTGAATATGCTTTCAC 3090259 30 96.7 36 .................G............ AAGTCAGGCACTTTAGCCTCCAAGAAGGCATTGAGC 3090325 30 100.0 34 .............................. GGGACTGGGAAAAAGAAGTTCCTAAAACATTTGG 3090389 30 100.0 36 .............................. ACCATATATTGAGACCTGTTCTTGAACTTCCTCTCT 3090455 30 96.7 36 .................G............ AGAAGGAAAAGAAGGGGATCGAGGAGGAAGCAGACC 3090521 30 96.7 36 .................G............ CTGCAGGAAGATTGCAGGCATTCGTTCTCCTCTAAA 3090587 30 96.7 36 .................G............ GAACCGATACCCAGCTGGGAGGAATGGAAAGCCTCC 3090653 30 96.7 36 .................G............ GTGCCATTGAAATTTTGAGTAATTAGTTGCTTTAGC 3090719 30 96.7 36 .................G............ CTGATCCTTGGACAAATCTCCCATAACGAGACAATT 3090785 30 96.7 36 .................G............ AAGTCAGGCACTTTAGCCTCCAAGAAGGCATTGAGC 3090851 30 100.0 36 .............................. AGCTCTATCACATTGGAATTGAATTTGGAGAAGTTC 3090917 30 100.0 35 .............................. TTTAGTCCTGAAGAGATTTGGCACTTTGATACCTA 3090982 30 93.3 35 ...............T.G............ ACTTTAAAAGAAGGGAAATCACTTCGGATAATATC 3091047 30 96.7 37 .................A............ GGTCCAACAGTTGATCATAATGCTCATTGGTTTTCAG 3091114 30 96.7 0 .................G............ | ========== ====== ====== ====== ============================== ====================================== ================== 49 30 98.9 36 CCTTTAATCGCACCAATCTGGAATTGAAAT # Left flank : GGTTTAGAACTTAAACTGATCTTTAGATGTATGTAATTTTAGTATATGATATCGGAGAAAGGAGGGTGGGGAAGATGCTTAAGCTTTGTCGCCAATATCTCAATTGGATACAGAATTCCGTGTTTGAAGGAGAGATTACTGAAGTGAAATTGAAGGAGTTGCTCTCCAATGCCAAGAAAATAATGAAAGAAAGGGAAGACAGTTTGATTATTTTTAAGAGCAGGAATGAGAAGTGGTTGACCAAGGAGGTTATTGGTCAGGAAAAGAATGATCTGGATACTTTTTTATAGAATACAGTTGTCGATCAGTATGTTTTTTTGGAATTGCTAGATGTTTTTTGCGAGGATTCGATTGTTTTTGTTGATAATCAGTTGTTTGGGTGCTTGTCGAAGGCCAGTCAAAACTCGGCTATTGTAGGTCGACGATTTTTGTTTTAATTTGTGTCAGGAAAGTATGGTCGAGGAGCTTTTTAGAAGAGGTTTTCTTGGAAAAAGTGACGG # Right flank : TCACCCTGACTGGGTGGGGTATACCACTTTACCTAAATATCCAGGGAAATTGTAATTCCTATTTTGGCGAACGAATTATAATCTTGGAACCTGGAAATAGAATAGAGGAGACGTCGTGGAAACGTCTGGGGAAGGTCCAAATTTTATTTGGTGGTTATCTTATGTTCTTTTATTCAGTGATGAGTTAATTTTTAATGGTCTTCATGAATGCTTTGCATTTCTCCCAATAGTCGGGACAGGCTATTGATGAAAAGAACCAAATCTGCCTGCAGCAGGCAGGAATCTAGGCTGTGGAGCATTCTCCAAATTGAGTAAACCTGGTTGTCGATAACAATTCTTTTGCCTCAATTTGATTTTGTGCCACTTGCTGTTGGCTAAAAATAAGTGGATCTCGCTCTGGATAGTGACGGGTGAACCGACCTCGTAAACGAAAGGGGCAGCCCTGCAAGCTGGCTACTCGCTAAAAACAGTCACAGACTGTTTTCTTTACGCTTGTCCCT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTTAATCGCACCAATCTGGAATTGAAAT # Alternate repeat : CCTTTAATCGCACCAATGTGGAATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //