Array 1 139549-139821 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWPF010000005.1 Pantoea brenneri strain IIF5SW-B2 NODE_5_length_227558_cov_353.882228, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 139549 29 100.0 32 ............................. TGCCCGGCAGGCCGTCCATCTGCGCAGAGTGC 139610 29 89.7 32 ............CC..............T TCAAATGTCATCCAGCGCGGATCTATTGACCC 139671 29 100.0 32 ............................. CAATTTCGAACCACCGGGTAATCACGTCTGCA 139732 29 100.0 32 ............................. GACGTGAAAAAATGATGCGGATCCTGCTGGTG 139793 29 75.9 0 ...........A.CT.......CT...TA | ========== ====== ====== ====== ============================= ================================ ================== 5 29 93.1 32 GTGTTCCCCGCGTGAGCGGGGATAAACCG # Left flank : GACCGAGAAAGAAGCGAAAGAGAAAGGCATCAGCTACGAGACCGCCACCTTCCCGTGGGCAGCCTCTGGCCGTGCTATCGCTTCTGACTGTGCAGACGGCATCACCAAACTGATTTTCGACAAAGAAACGCACCGGGTTATCGGTGGCGCGATTGTCGGCACCAACGGCGGCGAGCTGCTGGGTGAAATCGGTCTGGCGATCGAGATGGGTTGTGATGCGGAAGATATCGCGCTGACCATCCATGCTCACCCAACCCTGCATGAGTCAGTGGGCCTGGCGGCTGAAATCTTCGAAGGCAGCATCACCGATCTGCCTAACGCGAAAGCGAAAAAGAAATAAGTCACTCTGCCTGATAGAAAAAGCTCCCGATAAGGGGGCTTTTTTTTGCCTGAATTTTGGACTGGCGATTAACTGTGCATCTGGCTTAAGTCTGGGTGTAGAATTCGGTAGAATTATCGGGCTTGAAAAAGAATTTAGTAATCAATCAGATAATTTTAGG # Right flank : ACCTCAACCCGCACTCATCCTCTCCCACGAACGAAACACGTACCATCACACCCGCCGATCAACCGCCACCTGGTCGATAAACATCTGCGCCAGTACCGCGATGGTCGCATTGCCCGGTAATCTCTCCTCATTGATGCGCAACATCAGCGAGGTTGAACGTCGGCGTCCCTGCAGCAGCGGAAGCGGGCGCAGTTCGCCGCTCTCCAGCAAGGCGGCAATGTTCTTCTCCGGCAACCAGCCATAGCCCAGCTGATGCTGCACCGCCTCAATAGCCGCCGACAGGGTAGTGAATGACCAGTTCTCTGCCTGCTCGCCACTGACTTCTGACTGCTGCTGTTGCTGCCGATCGAGGATGGTAATGCAGGGCCAGCGCGCCAGCGTCGTCGCACTGAGCGGAGCCGGTTCGCTGTGCAGGGGATGATCGCGATGGGCGACGGCAATAAAATCGACGCTCATCAGACTCTCACCTGCCAATGGCTGGTCGTCGCTGTGTGCCACCA # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //