Array 1 995699-992706 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT996885.1 Dialister massiliensis strain Marseille-P5638 chromosome contig00001 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================================================================================================================================================== ================== 995698 28 100.0 32 ............................ TTATAAATCCGGTCGGAAGATTTAAAAAAGTC 995638 28 100.0 32 ............................ TTTATATCAGATGTTCCCACCATGACGGCACT 995578 28 100.0 33 ............................ CACCCGTCTACATGGCCTACAGTTTCCGCCTTT 995517 28 100.0 32 ............................ ATAAATAAGCAGGTCAATGATAGGGTATTTAA 995457 28 100.0 32 ............................ ATACCCACGCACCTGCCGCCGGACTGTAATCT 995397 28 100.0 32 ............................ TGTCCCCTTTTTATCTTACCAGGATGGCCACT 995337 28 100.0 32 ............................ ACATCTTCGTAGGTCTGAAGATAAGCAGTATC 995277 28 100.0 32 ............................ GTTTTTTGAATACGGAGTAGGCATTAATTCAA 995217 28 100.0 33 ............................ CGTAAGAAGAGATTTAAAAGCAATCAATAATTC 995156 28 100.0 32 ............................ AGGAGGTACAAAAAATGAAAAGGTACACGATT 995096 28 100.0 32 ............................ GGGGGTAAATACCCACAAGCCAGGCGCTTCGA 995036 28 100.0 33 ............................ CATATAGTGTATGCTCTGGTGATGTGAACCATC 994975 28 100.0 32 ............................ TACCACCTGGCACCAAATTTTCTCGCATTCGG 994915 28 100.0 32 ............................ ATCTATTTGGTGCTTATGCTATGGTTTCTCTT 994855 28 100.0 32 ............................ TCAATCGATAAATATGACTGTAAATAATAACA 994795 28 100.0 32 ............................ ATCGCCCGCTGCCGGAAGAACCATACCCCGGC 994735 28 100.0 32 ............................ TTTATCGTTCAAATCGCTGACTTTATTCTATA 994675 28 100.0 32 ............................ GCTCTCCACCCTTCACCGCGGTGCCTTGGGCG 994615 28 100.0 32 ............................ GCCTCTAACATTTTCGTATTAGTCATAAATTT 994555 28 100.0 32 ............................ TTCCTACGTTCTTATATTATATATTATATATC 994495 28 100.0 32 ............................ TGAAGCAGGAGAAGGAAAAGCTTGTTAATGAA 994435 28 100.0 32 ............................ GATGTAGCTAACATAGAATATATGACGATGAT 994375 28 100.0 32 ............................ AACATAACGCATTGTCCCAGCCGTGCCGCTAA 994315 28 100.0 33 ............................ TGTTTTAAAGGAGGAAAAGTAAATGTTAGAAAT 994254 28 100.0 32 ............................ AGTGTTCCAATCGCCCGTGTTCAGGTTGCCCG 994194 28 100.0 32 ............................ ACAACATTAACGCCGTGTAAATTGGCGGCATT 994134 28 100.0 32 ............................ TGACAGAAAAGGTACATATCTTAATGCATATT 994074 28 100.0 32 ............................ TTCCTGTCTGCTTACAACGCTCATTTTACACT 994014 28 100.0 32 ............................ CACCACCCAGCCGGCACGCCAAAACGCCCAAG 993954 28 100.0 32 ............................ CTTCCCACTTTCCCGCCTGGTAGCCGGTAGAC 993894 28 100.0 32 ............................ TTGATAATGCACATTTTCACCACCTGCCTGTC 993834 28 100.0 33 ............................ GCCGTTTTCCCTTCGTTCACCCCCTTTATTTTT 993773 28 100.0 32 ............................ GCAATGGAGAGCTTCGGGCTCTGCTCAAGTCC 993713 28 100.0 32 ............................ CTGGACAGCAGCGCAATCACAGAAGCCGACAC 993653 28 100.0 32 ............................ AATGACGTGGGGCGCACAATTTTAAGGAGGTG 993593 28 100.0 32 ............................ ATCAACGCCATGTATCTATTGGAGCAGGATGT 993533 28 100.0 32 ............................ TTACCAATGACCCGGACAGGGAGCTCCTCCAC 993473 28 100.0 33 ............................ CCGCCGTGCTCAAATCTGCGGGTCTCATATCCC 993412 28 100.0 32 ............................ TTTTCAACCGTTCGGCTTTTCCGAACAGTTAA 993352 28 100.0 32 ............................ TAAACCAGCCGCCGTATCGGCACACTGACGGA 993292 28 100.0 32 ............................ ATTGATTACAGTGTATCACATTTATTTTGATT 993232 28 100.0 33 ............................ GTACCACTCGCCGATAACATACACAACTCCGTC 993171 28 100.0 32 ............................ ATCGCCCGCCCGGCGGGCCAGCTCCAGGGAAC 993111 28 100.0 32 ............................ TGTGACTTTCGGTGTCTTGGTAATGATGTTTG 993051 28 100.0 32 ............................ AATCGTCAGAATCACTACCGCACTTGACTAAG 992991 28 100.0 32 ............................ GGAAGCGTTACAAAAAACGGTAACGAAATGTC 992931 28 100.0 170 ............................ ACGTGAGATTTCCTTTTCTCCACGTGCGATTCAATCATTGCCGAGAGAACAGAAAAACCATACAACCAGCCTGACGGCTGTACGAACTACAACTCATCCGACGGCTCCGCCGCCACCTTCCCTAAAGGGCAAGGTCAAAACCACTTAAACCTCGCTTCGCTCGAGAAAAA 992733 28 71.4 0 C.G..........C........C.TGTT | ========== ====== ====== ====== ============================ ========================================================================================================================================================================== ================== 48 28 99.4 35 GATCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TGAAAAAACTGGATCTGAAAAAAGCACTGAGACGATTGAGTGATTACGTTCATATCACAAGCATTCGTGAAGTACCGGAGTCCAAAGTCAAAGGGTATGTAAAATTCGCAAGATACCAGCCGGACAGCTCCATTGCCAGAAAAGCCCGTAGATATGCAAAAAGGCATCCTGAAGTTACCGAGAAAGCAGCTTTCAAGATGCTGAAACAAAGAGAAGAAAAGTATGACCTTCCCTTCATTCAGTTAAAGAGCTTATCTACAGGGCAAACCTTCAATCTTTTCGTCAAAAAAGAAGAAAAGAAAGAAGAAGGCCAGGGCGGATTTACAACTTACGGGCTGAGCAAGGGTGCAGCAGTACCCGAATTTTGACCCAAATAAAAAAGGCTTCGGAAAAAGAGCGATAAAATCTAACTTTTTTCGAAGCCCCCTTTTAAAAGGGTTTTGCATCACGTAATTCCGGATGGTATGATAGAATCTAAGAAATCTCTATGCACATGCATA # Right flank : TCTCTTTGAAAGGTTCACTTTGCTGAATCTTTCTTTTTTTATTTCTTTTTTGACGTTTCTTCAAAAAAATCTTTTGTTAGGCTCTTGAAGTGGACAGGATTTGTCATTGTAAAAATTATACTGATAGTAGAGGGGAGAGTGGGTGTCCGGGATGCGGGAAGGCATCCCATAGATGTGTCTGCTGGAATGGAGTGAGCATGATGGATTCGGTGGGAAGGATTACTCTGGCTGCCAGGAAGGGGCGGGGGAAGGATGCGGCGAAGGAGGTTTATATCGCTGCGTTTCCGGTCCTTCGCGCGCGTTTCTTTGAACGGTGCAAGGCGGCACATATGACAGGGAATGCTGTCATGAACAGGATGGCGGAGGAGTACTTGTCGGATCTTGCGGCCGGGCGGGACCGGTCGCGTGAGCTTTTGTCACTGGTGGAAGGAGTGAAGGAAAGGATGGAGCAGCAGGGGGCGTCGGGTTCGCTTTTGACGGAGCGTTTCATTGCGCGTGTG # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.26, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //