Array 1 111-3234 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLDL010000030.1 Clostridium bowmanii strain DSM 14206 contig00030, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 111 30 100.0 36 .............................. CAAAACTAATTGGTTTTATATCAATACTAGGCCCAC 177 30 100.0 25 .............................. GATTAACAATAGATCATCTTTACAA Deletion [232] 232 30 100.0 36 .............................. AGTAACGGAATGTTTAAGTATGTTAATGGCAGATTA 298 30 100.0 37 .............................. TATAAAAGCATAATAGCATTTAAGGGCAACAGTAAAG 365 30 100.0 36 .............................. TGTCGTTTCTTACATGAGATTCAAACCCCTCAAATG 431 30 100.0 36 .............................. TATGAAGTATAAATACCATCAATTAATGTTTTCATT 497 30 100.0 36 .............................. CTTGTCTAAATCCTCACATAAATCATTGAATTTACC 563 30 100.0 36 .............................. ACCTCATGCCAAGGGATCATAACTGCAGCTGCTAAG 629 30 100.0 36 .............................. TTAGTTAATGCTTCTTTTATTCCAGCAATAGTAATA 695 30 100.0 35 .............................. CAATGTGTAATCTTAAAAACTCTTTTCTAAGTTCC 760 30 100.0 36 .............................. ACGGATTTGTCAGCGAATGCGAACTAACTTATAAAC 826 30 100.0 36 .............................. AGAGTTTTCATGAGCTGTCTTCCTGGCTGCTGAATA 892 30 100.0 35 .............................. CTAAGATTATATCATAGTTTGCGTTTCTGTCGTTA 957 30 100.0 36 .............................. GTTTAATATCCATAATTACCTCCTTTCGACAACTTA 1023 30 100.0 37 .............................. TTAAGAAATATATACTATCAATATCAAAGATTTTAGA 1090 30 100.0 36 .............................. GCCGCAGTTGAGTGAGTAGTAATTAATTGTATAAGT 1156 30 100.0 36 .............................. TCTTTTCCTTGCTGACGATATACAAATCTTAATCCT 1222 30 100.0 36 .............................. CGAAGAATGAAAGTTCAGTATAGAGGGAGTGGGAGT 1288 30 100.0 37 .............................. AAGCATGAGGCGTTGTCGTCTCCATATTGGTCAAGTA 1355 30 100.0 36 .............................. TGAAGTGACCTCTTCCATCGCAGGAAATAGCTTCTT 1421 30 100.0 37 .............................. TTTATAAATTCAAACCCTTACATGGTTGAACGATTAG 1488 30 100.0 35 .............................. ACTCCATAAACCAATTCACCTAAACTCCATATTTC 1553 30 100.0 36 .............................. TATATTTTTAATATGTAAACTACCTTTTTAGCAGAT 1619 30 100.0 36 .............................. TTACACATAGTATTTATAACTACATAATTGTTTCTT 1685 30 100.0 36 .............................. TTATATCCTGCACACTCTAATATATTAAAGTTGCGA 1751 30 100.0 35 .............................. TTTCACAGGCAATGTTGGTATCGGTACAACGGTAG 1816 30 100.0 36 .............................. TATAAGCTCATGTAACAGGATGTTAGTATAATTAGT 1882 30 100.0 36 .............................. AAGTAAATGCATAAGCTAAGTACCGTATATGGTCTT 1948 30 100.0 36 .............................. TAAGCTTCGTGAATTGGTCCATACCCTTTAGGTGGT 2014 30 100.0 36 .............................. AAACGCAATCTACTACAACAACGTTTAAGGTTTTAA 2080 30 100.0 36 .............................. CCAGTTCCATTAATAAAATCAAAGTCATTTAATAAT 2146 30 100.0 35 .............................. ATTTGTAAATATATTTTAATTAATTATATGATTAA 2211 30 100.0 36 .............................. AAGAATATATTAATGAATATGAATTAGAGAATAATT 2277 30 100.0 37 .............................. GGGTAGTAGTGATGTATGTTGTTGTATGTAATATAGT 2344 30 100.0 36 .............................. ATTTTCTGTGTATTGAAGTCTTATATTACTTATTTT 2410 30 100.0 37 .............................. TTAAAATAGGTTTTGCATCTTCTAATTTCTGCATGGT 2477 30 100.0 36 .............................. TTTAATAAGCAAACATAATCTAACCCATCAAAACTT 2543 30 100.0 35 .............................. CAGCATGCAGCCATTCTATATCAATTAAATTAAAA 2608 30 100.0 37 .............................. TAAAAACATGGAACTAAATACATATTTAGTATAGTGT 2675 30 100.0 37 .............................. ATAGAAAAAATTAGACTAGACACACGCAATTATAAAA 2742 30 100.0 36 .............................. TCCAACAATTACTGAAATTGAAGTAATTGCTCTTAT 2808 30 100.0 37 .............................. TCAGGAAGTAAAGTTATTCCAGCAGATAAAACAAATA 2875 30 100.0 36 .............................. GGAAGATAAGTTCAAAGTCTTCGGAACTAAGTTTTG 2941 30 100.0 36 .............................. GTGTTAATTCGATTGTCAATAAGTGGTGTAGGAATA 3007 30 100.0 36 .............................. GCAGCACAAAGTGCGCAAATGCACCATCAAATAATC 3073 30 100.0 36 .............................. GAAGAATTTCAATAACTTCTTTGACCTTTGCGTCTT 3139 30 100.0 36 .............................. TTTAAAAGATATAAGATATATGGTAAAATAAAGAAT 3205 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 48 30 100.0 36 ATTTTAATCTATCCATATTGGAATGTAGAT # Left flank : AAAGCAAATAACCACTAGATAATTAATAGTATTATAGTTATAATTTGACTTAGGAATGCAGTTACATAAAGCTATATTTTGACGCACTACAATGAGATTAAAAGAACTCAA # Right flank : TGGGAGTAGCAATCTCAGTCGTTCCGCCTTCAAAAATACCCCTGGGGTGTTTATTTTTACATGTATGTAAAAATAAGCTAAAGGCGGAATTAATAGTATAGGTTAACTCTGTTTCTGTTTTGTTACTATACGGCCACCCTAATTGTTAAGAATTAAAGTTTAGAAAGAAATAGACGATAAAGTATTAGAAATAATTTGAAAAATACTTAGCATACATAAATTATATAAAAATAGGGGGATTTATATTGATAAACGTGTTTGATGTGTTAACAACAGAAAAGTCCAGAGTGAATTTTATGAAAGGATTAGTGTACCTATCTAAGTCACAGGAAATTTTTGAAGGAACAAATGAAATTAGTCCTGAAGAAATGGAATCATTAAAAGGCGCAATGCAAACTTTAAATATATCACAAGAAGAAAGAGTAAACATAGAAAAACTTATTTATTCTACAGAAATTAATTCGGATATTGAATTTGATAACATAAAGCAATCATTATTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTAATCTATCCATATTGGAATGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 1082-1246 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLDL010000068.1 Clostridium bowmanii strain DSM 14206 contig00068, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 1082 32 100.0 35 ................................ TCTTTGCTTGTTTTCAAATCTTATGCCTATAAAGT 1149 32 96.9 34 ...............T................ CTCTTGTACGCATAAGAAAAAGTAAAATGCTTTT 1215 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 3 32 99.0 35 GTCGCACCCTTTAGGGGTGTGTGGATTGAAAT # Left flank : TTGAATATCTCTTCCGAATGCTTCCCAATAGTAATTTTGCATCAAATTCTTCTGTGCTTGATGAATATTTGCCATGGTCAGATAAGGTACAGCTTGAATGCAGAATAAATACAACAGAAACAGAAACAGGTAAAAAGGAGGGAATTTGCAGTGAGTCAGCCTAATATTAACTACATGATGAACATGACTAAAGAGTTTCTTAGTGGCAAAATTGATGATATAGCATATACTCTTGATTTCCCATATGAGCTAGAACATCGATACAAACAAATGCATCGAGAAGATGATGATTATTGTGAATTAATATATGAATGTCTTTATGAAGAAGGCATTGCTATATATAATGAGATATCAGATCCTGAATTTAAGAAACTTATTCGAAAACAATATAATTACATAATGAAAATTGCAAAAGAAGGATTTTATTAAAAAAACAGTTTCACAGGTTAATGCGGAGCTGTTTTTTTAGGTAACGGTATGTGTTCCATCGCTTACAATAG # Right flank : TATTTACACAGGGAGCATCTATAAATAGGTCCAAGCCAATCACCAAATGTTTGATTTTTAGATTATTTAAAGGTTTCGTTACCTAACAAGGTTATAAAGCAAGCTAGTGAATAATCCATTACTAGGGAACCTGTCATCTGGTGGTTTTTAAGTTATTGTTTAATAACAAATAGTGCGCAACTTTAAGTAGAAGGGCATATTAACTAATCTTGCTGATAATAGAGAATATTCATATTTGTACTGGGAAGGGGTTTCTAATAATAAATGGGATATGTCAAAGTGATTTGTAGTTAAAGGTGATGGATTTTAAGCCCTTAAATAGTGAAATGAAAATAGAAGAACAAAAGCTAAAACCATTCATAAAAAGTGGATTTACGGTCGTTGAATGGGGTGGAACTGAATTAAAGTAAAAAATCGATGAAATAGGATTTTAATGATATAATAAAATTATATTTATTTAAGAGTCAAGGCAGAAGGAGAAAAATTAAGAAATGATAAAA # Questionable array : NO Score: 8.31 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTTAGGGGTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.30,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA // Array 1 7822-115 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLDL010000040.1 Clostridium bowmanii strain DSM 14206 contig00040, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 7821 30 100.0 36 .............................. TTGAAGGAGATAATGATCCAGATTATGAAACTGAAA 7755 30 100.0 37 .............................. TGAAGTGACCTCTTCTATCGCAGGAAATAGCTTCTTG 7688 30 100.0 36 .............................. AGGAAATATGGTTATCTAAAGACATGACTATAATGG 7622 30 100.0 35 .............................. TACTCACAAAATAACTCACAACACATCAAACCTTT 7557 30 100.0 36 .............................. TTATTACACCCCATTTCACAGGACATTTGAAATATA 7491 30 100.0 37 .............................. TGTCCTAATTCTTCGGATACGGGGATATCGTGTACGG 7424 30 100.0 36 .............................. TTTCTTTAAGATGTTTCATATCACCGCCAGCATCTA 7358 30 100.0 36 .............................. AGAGCTGAACAAATGAAATTCGATACCATGCCTTTA 7292 30 100.0 36 .............................. TTAAAAGATATTAAAACAACAGATAGATTATCGACT 7226 30 100.0 36 .............................. GTAGATGATGGGGATATTCCATTTTAAGGTAATTTA 7160 30 100.0 36 .............................. TAATCTATAAGTGATATTAATATTGGTTCTGTATTG 7094 30 100.0 37 .............................. TCTAGATCATTCTTAATATCCTTAACAGCTTGTAATT 7027 30 100.0 36 .............................. TTACTATGTAGTGCATTGTTAAACAGTAATAATATA 6961 30 100.0 36 .............................. CCAGGTAATACTGATGTAATACATTTTGAAACAGAT 6895 30 100.0 37 .............................. GATACAATGGATATATCAAACTCAATAGATAATACTG 6828 30 100.0 37 .............................. TTGCTCTGAACAGCAGACCTATCAAATTTCTAGTGAA 6761 30 100.0 37 .............................. TGTTGAGTTGCTCCAGTGTTTAAAGAATTTACTTTAG 6694 30 100.0 35 .............................. CCTAGTGGCGGTGGTAAGCTATATGAACAAATTAA 6629 30 100.0 37 .............................. ACAGAAATTGAATTGTTAAAAGAAGAAAATGAAGCAC 6562 30 100.0 37 .............................. AGTAGTTGAGTTAACAATGCTAAAAGTGTACTCATTA 6495 30 100.0 37 .............................. ATTTAATTCACAGAATATAGAGGGTACAGAGGAACTA 6428 30 100.0 37 .............................. TAAAATAGCTTTGCCATAGTCAATATAACTGATTCTA 6361 30 100.0 36 .............................. ATAGGGAATTAGAGTTAATGGCCAGTGCATGGGGTA 6295 30 100.0 37 .............................. ATAATAATATCTATATATTACTCATAAAAATAAACTA 6228 30 100.0 35 .............................. TGTTGATAACCCCAATGTCTATATTTTTTATTGTA 6163 30 100.0 36 .............................. TTCTGAACTAAAATCTATTAAATTCATTTTTATATG 6097 30 100.0 36 .............................. CATTGATTAAGTGTATATTCTAAGTAAAATTTATTC 6031 30 100.0 36 .............................. TTTAGTGTGCTTTGTCTATTACTAAAAACATATATG 5965 30 100.0 36 .............................. ACTTTTAATCCTGCTGTTTCAAGTTCATCGTATATT 5899 30 100.0 37 .............................. GTATTATAGTAGTTACGTAGCTATTGTATGAGCTGAA 5832 30 100.0 37 .............................. CTGCATATGCTTCTATTCTAGTCTTCGCGCGTAAAAT 5765 30 100.0 36 .............................. ATATGGAAGTTATAACAATATAAAGGGAGTGTAATA 5699 30 100.0 36 .............................. CAATGTTGTCAAGGTGTTACAGATGTAATGAGAGGT 5633 30 100.0 36 .............................. ACAGTGGCTAAGATACAAGCACTAGCAAAGGCTGGA 5567 30 100.0 37 .............................. ACAGTAACTACTATATGTTTAACGTGGGTCTGATATA 5500 30 100.0 36 .............................. GGCGGTGATGGTGCTAGTGTATCATGTGTCACTATA 5434 30 100.0 37 .............................. TGATATGCGCCCCCTGTTTATAATATAATATCATAGT 5367 30 100.0 36 .............................. AAAGCACTAAAAATAAAAGCAAAAGGATTCGCATAC 5301 30 100.0 35 .............................. ACTATATCACTAACAAATAATAGTCAGGCATTACA 5236 30 100.0 36 .............................. CCGGGTAACAGAATTTAAAAAAATGTGACTGAACAG 5170 30 100.0 36 .............................. TACAACGTCTTAGATGACACATATAAGCTACATACA 5104 30 100.0 36 .............................. TGAGTTCTTTTACATTAAAACTTGATAAATCTACCT 5038 30 100.0 36 .............................. AATTTATGGTCCTTATTCTCAATTAGAGGTCTGTTT 4972 30 100.0 36 .............................. GCCAGTTGGCAACGAAAGAATTAATTCTAAGGGTTA 4906 30 100.0 36 .............................. GGGCTTCCACTCAAGGCTGATGGGTATGAATGTAAT 4840 30 100.0 37 .............................. ACGTGAGTATAAACGCAATAGTATTTTAAATGTTTAT 4773 30 100.0 37 .............................. TGGAGAAACAACTTGAAATTGAAAAAGAAAATTTAAT 4706 30 100.0 36 .............................. GTGCCAACAGGACAAAAAGGAATTGACAAAGAATCT 4640 30 100.0 37 .............................. TATTATCAGTCATAATATAATCGGCTATATTCTTTTG 4573 30 100.0 36 .............................. TGTAGACGATATAGGGAGGTTTAAGATGGAGTTAAA 4507 30 100.0 36 .............................. AACAGTCCGTCTAATGACCTCTTAGTGCCTAGTTTG 4441 30 100.0 36 .............................. TGCGGATGTTCCTCCAAATGTACCACAAGTATTATA 4375 30 100.0 37 .............................. TTGAATTGTTTGTATGCTATCATATGTGATTGATACT 4308 30 100.0 36 .............................. TTAACGTAGCACAATATTGATAGAATTGATTTGAAA 4242 30 100.0 37 .............................. TATATAAACACTGTTATAAACTCAAATGTAAACACAG 4175 30 100.0 35 .............................. TGAGTTCTTTTACATTAAAGCCGGATAAATCTACC 4110 30 100.0 36 .............................. ACGTTAACACTGATGTGGAGTGAACACACAATAGTA 4044 30 100.0 36 .............................. TAATACTACTACGACTACAACTACTATTAAGATTAT 3978 30 100.0 37 .............................. AAATTTCACGACATTTATAGTTTAATCCTTTAACATT 3911 30 100.0 37 .............................. ATGAGAATGTAGAAACTAAATACACAAAAAGTGGAGG 3844 30 100.0 36 .............................. TAAAGTATACCATATTACTATATTACCATATTGCTA 3778 30 100.0 37 .............................. GCTTTAAACACTTTTGCATTGTGAAGCACATTAGATC 3711 30 100.0 37 .............................. TTTGACTTTATAGTATATGAGGACAAAGAGAAAACTA 3644 30 100.0 36 .............................. TGATGTTTACTTAATAGAAAACTTTATAACTATAAA 3578 30 100.0 36 .............................. ATGCAAGTTGAACAAGCCTACGAAAAGAAGTATCAA 3512 30 100.0 36 .............................. ATTGATTCAAATGTGTCTCTCTCGCCCTGTATTGCA 3446 30 100.0 36 .............................. TGATTTATGTTATAATAATATCAAACGGGGGCGGTC 3380 30 100.0 37 .............................. GACTAGAAATAATATAGATATTGACTATACATTAACA 3313 30 100.0 36 .............................. CGTGTAGAAAATATTCTTAACGGTATAGGAGAATTA 3247 30 100.0 36 .............................. AAAAACTTTTACCATGCTATAATGGCCCTCAAACAT 3181 30 100.0 36 .............................. GCCTATTGACTTAATTGAAGTAATGGAAATATTAAA 3115 30 100.0 36 .............................. TTCATTAAAAATATTGTAGTTACTGTCTTTGATGCA 3049 30 100.0 36 .............................. TATAAACATAATAAGGCATTTTAATGGATAAAAAAG 2983 30 100.0 35 .............................. TGAGCCTGTACCTCCACATAAATCAAGTATTATTT 2918 30 96.7 36 ..............G............... CTCCTTTTCATTAATTTGTTCGCATTCTCTAATCGC 2852 30 100.0 36 .............................. CCGAAACTAGCAATTTCACCAAGTGTAAACAATAAA 2786 30 100.0 37 .............................. CAAAAAATAATAAAGATGGTTAATTGTTCAAGTGATG 2719 30 100.0 36 .............................. TAAATTTAAAATTTACTTTGAAGAACTTCAAAATGT 2653 30 100.0 36 .............................. GGGAAATGTACTTTTAAGGAATTTGAAGCAACAAGT 2587 30 100.0 36 .............................. TGTTAACTATTGCAAAGCTGAATGTAATAAAGAGTG 2521 30 100.0 36 .............................. ACTGGATGGACTTCGATTGATGGGGAAAAAGCAGAT 2455 30 100.0 35 .............................. TTTAGATATGGTTAAAGGTAAAGTAAAACAAGTTG 2390 30 100.0 36 .............................. CCAGAACTTATCTTTTTCCATACATAACGTTTTACA 2324 30 100.0 36 .............................. TAAGCTAACCGAGCATTAAACTCTGTTTTTGTTAAA 2258 30 100.0 35 .............................. CATACTCTTGGTAATATTCTAATATTAGATTTTTC 2193 30 100.0 37 .............................. TCAGGCACAAATGACCTCACATGGATTGATACTTGTT 2126 30 100.0 37 .............................. ACTTACGTAATGATAACTTATTCTTTAACCTCAACTC 2059 30 100.0 36 .............................. CAATCTGCCCAATATCTAATTAAAGATTCTGTATTA 1993 30 100.0 36 .............................. GTTGATAGTGATTTTGTAGGTGTTAAAATTTTAAGA 1927 30 100.0 36 .............................. TACATATAAATACTTACTTACTTTAATATACATAGT 1861 30 100.0 36 .............................. CTTCCCATGATCCCATTACTTGTAAATTTTCATCTA 1795 30 96.7 36 ........T..................... TGGCTTAATACGTCTGTAATTACAGCTTTTTCAAGG 1729 30 100.0 36 .............................. ACTAAATATATCATTACAATTATACTAACATACTAT 1663 30 100.0 36 .............................. ATATAATGCATTATTCAGAGCCTTATCTAATACTTT 1597 30 100.0 36 .............................. ATATGTAAAATAATTTATCGTCTTGAGTGTAACATG 1531 30 100.0 36 .............................. TTGGAAGTTCAAGACAAAATAAAACAAACGTTAAAA 1465 30 100.0 35 .............................. TTAATTATGTATCATTATTTGTGGTCAGCTAATCC 1400 30 100.0 36 .............................. TAGAATATTGATATAAATTACTATTATCTAACATTT 1334 30 100.0 36 .............................. CAAGAACAGAACTCTAAAAATAACTCCAGAGGTTGG 1268 30 100.0 36 .............................. ACTAAATATATCATTACAATTATACTAACATACTAT 1202 30 100.0 36 .............................. TCAAATATATTATGTATTGCTTAACTTTTTAATTTA 1136 30 100.0 35 .............................. TAAGTTATAACTTTAATTTATTAAGGTATACAGGA 1071 30 100.0 36 .............................. AAGATCCAGACGTCGCAACCTAACAAAGAAAGTAAA 1005 30 100.0 37 .............................. CAAATAAAAGATAATATAATTGGTTATCATGGAACTA 938 30 100.0 36 .............................. TTCTAAACTTAAAAGATTTACAAGCAGCCTATAACG 872 30 100.0 37 .............................. TAGAGCCTGTAGACTCAACCTCTGACTTCTCTTTCCA 805 30 100.0 37 .............................. ATTTCTTCATTTAATTTAGTTGAACTTAAAACATCTG 738 30 100.0 36 .............................. CTACATTCCCTGTATCTGAACTTAATGAGGGAATAG 672 30 100.0 36 .............................. TTACCAATCAAATGGCTAAGATGGGATTAAATACCG 606 30 100.0 36 .............................. GTGTAATGTTCTAGGAATAGGAGTGCCACTTAAACT 540 30 100.0 37 .............................. GAATACATTGACAGTGTAAACCGTAGTATATAATTAA 473 30 100.0 36 .............................. TAAAGCAGATATAATCCAACTTGGGTGTATTAGGTA 407 30 100.0 35 .............................. TCCCATAACTCGCTATCATTTCCATTGCAGTATGT 342 30 100.0 36 .............................. CGGATATCGCTTGATCTAATTTTACTATTATAAAGG 276 30 100.0 36 .............................. TAAATTCTATACAGTAGGAAAACCACACTTAAAGGA 210 30 100.0 36 .............................. GGCAGATATAATGCAAGAATTGTGACTACTAATATA 144 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 117 30 99.9 36 ATTTTAATCTATCCATATTGGAATGTAGAT # Left flank : ATGAAGGTTTCAAAATATGGTGGTAGGAGGAGGATATTTTAATGTATGTTGTCTTGGTATATGATATAAGTGGAGATGAAAATGGACAAAAGGTATTGGGAAAAGTTTTTAAGATATGTAAAAAGTATTTAACTCATATTCAAAATTCTGTATTTGAAGGTGAGATTACAGAGGGACAAAGGGCAAAATTAAATGCAGAATTAAATAAACTTATTAGGAAAAAATTAGATTCTGTGATAATATTTAAAAGTAGAAATGAAAGATGGCTTGATAAAGAATTTTGGGGTAAAAATGATGATGCATTGTCTAATTTTTATTAAATTGTCGATGTGACATAGCGTAAATTAACTGTGGGTACGACAAAGTGCTGCAATGTGTGGATTTGAATTAGCAAAATGTTAAACTTATGCTATTATTAGCTAGATAATATATATAATAAAAAGACATCGACAAAAACTATGTTTGAAATGCCTACAAATAGGGACTTAAAGGGCAAACGC # Right flank : TTTCTAAAGGGGGTACATATGAGATTGTTAAACGTCAAATTATAACTAATTGAAAAGTCATTTTATTTCTATTATTAGTAGGTGATTTACGTCAAATTATACCTATGAAATCACT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTAATCTATCCATATTGGAATGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //