Array 1 23160-22521 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFDR01000036.1 Streptomyces sp. V2 36, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 23159 29 100.0 32 ............................. TGCGAGCAACGACATTCTCCGACCCGGTTACA 23098 29 96.6 32 ............................C ACGTGTGAGATTCCGGCGACGTTCCAGCCCTG 23037 29 96.6 32 ............................C TGCGGTGGCTTCGGTTCGTGGCTACCCTCTCG 22976 29 100.0 32 ............................. TGCGGACGGTGTGGACCAAGGGCGCGTCCATG 22915 29 96.6 32 ............................G TCCTCGGCGGACTCGGGTCTGCCGAACTCTCT 22854 29 100.0 32 ............................. GGACCAGGGCTATGTGTCCCGGCTGGAGCGAG 22793 29 96.6 32 ............................C TCCGGCCGCATGATGGCCTCGCCGCCGGACAT 22732 29 93.1 32 ............T...............C ACGCCGAGCTGCACCAGCTCGTCAGGCATCGC 22671 29 100.0 32 ............................. ACGGACCGGCTCCAGCTCCCCGCCCTCAGACG G [22649] 22609 28 93.1 32 ..............-.............G CACAACGCCGCCGCTTACGTCGGATCCCACGA 22549 29 79.3 0 ...A....A..A......A...C.....C | ========== ====== ====== ====== ============================= ================================ ================== 11 29 95.6 32 GTCGTCCCCGCGCCAGCGGGGGTAGCCCT # Left flank : ACTCCCCACCTCGACGAAGACCTCAACGGCCTCTGGGGCGACGGCGACACCATCGTCAGCGGCGGCCGGAACTGGGGCACCCCCTTCACCGACGACCACCACCTCGACGTCATCCCACCGGACCCCCCGACGCCGCGCGCAGAGGAAACGCCATGAGAACGGCAGCCACCGTCGTCGTCCTCATCGCCGCACCACCCGGCCTGCGCGGCCACCTCACCCGCTGGTTCATCGAAGTCGCCCCCGGCGTCTTCGTCGGAACCCCCAACCCCCGCATCCGCGACCGCCTCTGGCCCCTCCTCACTGAACGCATCCGAGACGGCCAGGCCATCATGCTCGAACCCACCCCCAACGAACAGGGCTGGACCGTCCGCACCACCGGCCAAGACCGCTGGACCCCCACCGACTTCGACGGCATCACCCTCATGGCCCGCCCCCGCACCCCGACGAACCAGGCAAAGGAAAACCCCATGATCACCAGCTGAAACAGCAGGTCAGGAAGC # Right flank : CTTAGAACATCTGGGACCCGACCATCCCGGAAATCTCCCGGCATTTTGACATGCCTCAACTGATCGTGCTGGGCGGGGACTTGCTGGCGGCGGCAATGAGTTGAGCGGAGGGCGACCGTACCGCGTCAAGCGGGAGGGCATCCGCAGCGCGGGTAAATCAAGACTTACCTTTGCGGGCTCCCACCCCCATAGTGGTGAGCCGCACCCAGAGGAGGCCCCCCGTTGTCGCAGATCAGCGACGGTCCCGCGCGTCAGGTGAAGGCGCAGCAGGCTTACGTGTCGACCATGTACGGGCTGTTCGACGAGAGGGTCGCGCAGGTCCGGGCGCAGCTCGCGGCTGTTCTCAAGGCGCCGGCCGACGGTGGGCGGGAGGTGTACGAGCGTGATCTTGCCGCGGCCCGGCTCGCCGGGGAGATTCGGCGTTATGAGGCGGCCGAGAGCGGCATGGTTTTTGGCCGGACCGACGCCGCAGATGGCACCGCCCTGCATATTGGGCGCCT # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCAGCGGGGGTAGCCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCCCGCGGGGGTAGTTCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 33588-35567 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFDR01000036.1 Streptomyces sp. V2 36, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 33588 28 100.0 33 ............................ CGTGCAGATCGCGGCGAGTGAGGCTGAAACGGC 33649 28 100.0 33 ............................ CGGCACTCTACAGGCACACAGCGCCGTTTCAGC 33710 28 100.0 33 ............................ GGAGGCGGCGTGATGGCCGTTCAGATCACGTAC 33771 28 100.0 33 ............................ CGCCGCCCCCACCGCCTGACGAGCGTGCCGGCC 33832 28 100.0 34 ............................ ACCACCTCCTCCCGCGCCCACCACTCACCTCGTC 33894 28 100.0 33 ............................ CCCGACGGGTGTTCACGGGGTGATGATCCACCA 33955 28 100.0 33 ............................ CCGAGATGCGCCCTCGACGGCTGCGCGTCCGGC 34016 28 100.0 33 ............................ CGTCCAGATCGGCACCCTCGACCAGATCATGTG 34077 28 100.0 33 ............................ GGCACACCCGACCTGGACGACCGCCTGGCTCCA 34138 28 100.0 33 ............................ CGCGATGCCGACGATGCCCATCGCGATCTTCTC 34199 28 100.0 33 ............................ GGGTGGTGATATGGCGTGTCCGGTCGATGACAT 34260 28 100.0 33 ............................ CAGCGGCGTCCCGGGCAGCGTCACCCCGACGTT 34321 28 100.0 33 ............................ GCCGTGCGGGGGCCTCGCCCAGGGCGTCGGCCC 34382 28 100.0 33 ............................ TCTCCCCCCACCCGATCGGTGCCCGCCCTCTTC 34443 28 100.0 33 ............................ TCAACCGGGATGTATCGGACACGCTCGGATAGT 34504 28 100.0 33 ............................ TTGGCCGTCGACAACATCGCCCAGCGGGATGTC 34565 28 100.0 33 ............................ TCCCGGTCCGGCGGGTGACTCCGTGATCGCCCG 34626 27 96.4 33 .................-.......... GGCCCGCCGTCCGGATCGCCCGGGTCAATGGTC 34686 28 100.0 33 ............................ CAGTCCTGGCGGTCAGCGCCTTCGCGGAGCTGA 34747 28 100.0 33 ............................ CCTGCGCCGAGAGTTCGGGATGAGCGAGGGCGA 34808 28 100.0 33 ............................ GTACGGGCCGCGCCAGATCTGGCCGTCGTACCA 34869 28 100.0 33 ............................ CCCGCACCACGGGGTGCCGCTGACGCCCCACTG 34930 28 100.0 33 ............................ CCGAGGGCGCGTGCTGCCCTCACCCTCGACGGG 34991 28 100.0 33 ............................ CGTCGCCGGCCTTCTCGCCGTCCTGATCTGGGC 35052 28 100.0 33 ............................ CCGAGCCGAGATCCTCGCCAAGGCCCTGTACGA 35113 28 100.0 33 ............................ CCGCCGCGCGGCCCACGCCCGCCGCCGCACCAC 35174 28 100.0 33 ............................ TACACGACCGGTGGTTGCGCCTCCGCGAAGGGG 35235 28 96.4 33 ..........A................. TCCGGCCCTCCTGGACTCCAGTGTCAAGGGGCA 35296 28 96.4 33 ............T............... CTGGGTGGCCGCCGTGTATGCCCGGTGGGCAAA 35357 28 100.0 33 ............................ TCCCCAGCCCAGCCCCTGACGGCAGGTCAGGAG 35418 28 100.0 33 ............................ CCGCGCCTGTGCTCTCCATCGTGACGGCGAGGA 35479 28 96.4 33 .................A.......... GCCGACGAAGCGGCCCTTCTGCCCGGACAGAAC 35540 28 92.9 0 ...C.....................C.. | ========== ====== ====== ====== ============================ ================================== ================== 33 28 99.3 33 GTCGTCCCCGCGCCAGCGGGGGTTGTTC # Left flank : ACAGCCCCCCGACAGCCGCCGTATCCAGCAGATGCCCCAGCAACAAATGCGTCCGCCCTCCATTCCGAGCAGCAGACTTCCCCCACAACCGCGACACACGCACCACCGTCTCCTCCCTCACCCCCAACACCCGCATCAACTCCACCACCGACCGCTCGTCCTCCACCGCTCAAACCCTCCCCGCATCCATAATTCCGCCTGCCCCTCAAACCATAGACACCACCACTGACAACGCCCCCTGGCCAGCCAACTCCCGCACCACAGCAGCCGCAAACACCCAATCTGACACCACCGAGCACCATTCCACCCACCCCCGTGTAGCGTTAACGCCCCTCCCCGACCGGAAGAACCAACCGACGATCTTGAACCACCCAGCCAACCCGACATGAACGGCCTTGATCCTTTCCCCACCGTGGCAACCGTCCCCCACCACTGAACACCTGCTGAAGCAAGTAAAGAAAAACCGGCTCACCCACTCCAATCACCGCAGGTCATGAAGT # Right flank : CGCACACCTCACCCACAGTCCTCCTATGCCCCTGCGTGTGCAGACGACCCGTGATTCCCTGCCCGGCACCGCCCTGAGCCGCCTCGCGCAGGCGGCGGACGTCGTGTCCTGGCCGGGCATGGACAAGCCGTCCCCCGCTGGCCTCGCGACGCTCGCGCCGGGCGTCTCCGCAATCCTGGCCCTCGGCAACGGCACGGTGGACGCGGCTCTGATGGACGCCGCCGGTCCGGCCCTGCGCGTGGTCGCCCTGGCGAGCATGGGGTGCGACAACGCCGACCGCGTCGCCGCCGACCGCGGCATCACCGTCACCCACACCCGGGCACCCTCGCCGAGACGACGGCCGACCTCGCCTTCGCCTTGATCCTCGCGGCCCGGCGCCGCCTGGGAGCCGCCAACGCGAGCCTCATAACAGGTGCACGAGTACCTCGGTCTGGACGTCCACGGCGCCACCCTAGGCCTGATCGGCCACGGCCAGATCGCCCGCGCGGTGGCCCGCCGTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCAGCGGGGGTTGTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCTGCGGGGGTTGCTC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 36876-36234 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFDR01000006.1 Streptomyces sp. V2 6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 36875 29 96.6 32 ............................G ATCAGTGTCAGCCTCGCCGAAGGGCAGGACGT 36814 29 100.0 32 ............................. CTCCAGCACGTGAATTCGGCACACTTCGCCTC 36753 29 100.0 32 ............................. AGCGTGGCGCCCTGCTCGTACGCCCTGACCGT 36692 29 100.0 32 ............................. GAGACGTATCCAGGCGTTGGAGCATTCGGGAA 36631 29 96.6 32 ...........A................. CGCACCGAAGCACTCCGCGCAGCCCTCGAACA 36570 29 100.0 32 ............................. GCCCGCTTCACGACCCACGCTGGGGTCATGGA 36509 29 96.6 32 ........................C.... GGCTTGGCGGTCTCCGGCTCGCAGATTCATTC 36448 29 100.0 32 ............................. TCCGCGACGACGGCGGAACCGCGCTGCGCGCT T [36445] 36386 29 100.0 32 ............................. AGGTCCTGTTCACCCGGCCCGTGCCGAAATCC 36325 29 89.7 33 ...........A.....A........T.. AGCGGCCGGCGCGAGGACCCGGGACGAGGACCT 36263 29 89.7 0 .C.........A....T............ | G [36241] ========== ====== ====== ====== ============================= ================================= ================== 11 29 97.2 32 GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : CATTAGCTAAGTCGACATTGCCCAGGTTGCAGATCGGACGGCACTCAACCATCTCAACCTCTGCCCAGAAGGCAGAAACTGCGGCTCCCGAAAGCACCTTGTTGATGAATGCCATGGACACCAAGGACGATCTGCACTTCGCCCAGCAAACGTCCATGCCGACGCCCGGCGGGCCGGCCCGAGCTCCCAACCGTGCAAGCTTCGAGGACGCAGCCCAAGACCCCCGGCGCCAACAGCGACCCAGTCCAGCCACACCCTCGAAACAACCCCTGACGACCAGCAGCGTTCCGTACGATTGGCATCTCGACGCCGGAGAGACCAATGCCCTTCACACCCGCGACCAGCCAACACGCGAACCACAACAACCAGCGCTGCGTCACCAGCCCAAGCACTCCCCGCCCCTCTCCTCCAGCAAGCCGCCACCAGTGACCAAATTGTCCGTTTCTCTACAAGTAACGAAAAACAGCCCAGCAGCCAGCTAAAGCCCCAGCTCACGCAGT # Right flank : TCCTCAACCGGCAAGGGGGGCCGGGGCTCTCGTGGTCCCCGTGCACGGGGTATTCCTGCGGTGGTGATCATGTCTTTGTGCGAGGTGGCGGCTCTGCTGCTTAATTCGGTGTCCTGGCAGCGAGTTGGTGGCTGAGGCGGGTGAGTCTGCTGGGCCAGGGTGTGAAGGGTGGTTGGCTGGGGTTCCAGGGGGTGTCGAGGCGGATGACGTTGACGGCGGTGGTGGAGAAGGCGTACTTGGAGGCGGACTTGGGCAGGCCGCAGTAGCGGGCCCGGCGGAGGCCGGTGACGTCGAGGGTCTGGTTGATGGTGCCCTCGGTCCCGGCGTGGAGGGCGTGTTTGGTCTTCCAGTCTTGGTGGCCTGGTCGGCCCAGGCTTCGGTCAGGGGCTCGTGGAGTTCCTTCGGGCGGAGGCTGAGGGTGCGGGTGCCGCGTGCGGAGGTCGTGTACTTGTCCTGGACGGGGCGGGCATGGCCGTCGGTGCGGGCGAATTGGATGGCGT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 100542-101180 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFDR01000018.1 Streptomyces sp. V2 18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 100542 29 100.0 32 ............................. CGCACCCTCACTGACGCCGTCCGCGCCGCCGT 100603 29 96.6 32 ............................G AGCGGTTTCGGGTCGTCGTCGGCTCAGGTCGC 100664 29 100.0 32 ............................. CCCCGCCACCCCGGCGAGTGGATCCAGATCCA 100725 29 100.0 32 ............................. CAGTGGGACCACATCCGCGATGCAATCGGCTT 100786 29 100.0 32 ............................. TCCGCGCCCTAATCGCGACCTTGCCGTACTCG 100847 29 100.0 32 ............................. CCACCCTCTGGTCCCTGTAGGAGAACCCGTGA 100908 29 100.0 32 ............................. TACGACGTGGCTGATGTAGATGGGGGATCTAC 100969 29 100.0 32 ............................. TCGCAAGGAAGCAGGAGCACATGAACGGATGG 101030 29 100.0 32 ............................. ATCAACGCGCCGACCACCACCGAGCTGAACGC 101091 29 100.0 32 ............................. CTCAGTCCCAACGCGCGCGCTTTCGTGAGGGA 101152 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================ ================== 11 29 99.4 32 GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : GAACGGGTCCTCTCGTTGCGCGATCTAGAGGTTGCTGGACTCGGGGGCAGGGCGTCTTTCGCGGTGCCCGAGGTGGCTCCGGGTGGCTGGAGGGTACCCGGGTGGGGAGGACGGAGGGTGTTGGCGCCGGTGGTCTCTGCGGGCCTCTTGAATGCTCCGTCTTCTCCCGGGATGCGGTGCTCGCTCCAAGTCGCGTGGGGGCGGAGGCTGACGTCGGATCCATTTCCGGGGGCGTTTCTGCTGCTGGGGATGTTCAGACGTTCATTGAAGCGCCGGGCTACCGGGGGTCGCGTCGAGGGAACTCGGCCATCCACAATCGTCCGGCGGTGAGCAGCGGGGGGCGTGGGGCAGGGCGCTGAGGAGTTCGACGGGTTGGGTGGGTAGGGGGTGGCGGGGATAGGGTTTGGTCCGGAGGCTCGGGGAGGGGTGACGAAATGTCCGGTTCTCGGGAAGTAATCAGAAACGGCCGCTCGCCCGGATAAAGACCCAGGTCACGAACT # Right flank : TAGCCGCTGAAGGTGTTCACGGTCGAGACTGTCGTGGTTCCTGCGCGCGGGAGTACGGCATCTCCAACACCAGCGGGTCGCCGTCCGTAGGCTGTGGCTCGTCTCAGGAAGTGCAAGTGACACTCCACAGCGAGGACTTTCCTGGTGATGACTCACACGGCGTGAAGACCCTGCCGTGCTCTGGTGGAGCCGTGAGCTGGACCGGCAACTGGGACAGTGACGACCTCACGAGTCGCCGTGCGACCGGCACGGCCGGCTATCCCTGATACGTGCGGGCCGGTACGGTCTCGGGTCGGCCGGTACTTCGTGGTCGCCACCAGTTGCGGGTCAGCAGTGCTCCCACCACTGCGCCCGCCGTGTTGAGCAGTACATCGTCCATGGACGATACGCGGCCCACCGCCAGTGCGTACTGGGTGATCTCCACTGCCGTCGAGAGGAGTGCCGCGATGGCGGCCACCCTTCCCAGAGTTCTGGAACGGCGGCTCCGGATCGGCAGGAGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //