Array 1 210045-207941 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQKE01000004.1 Leclercia sp. LSNIH4 NODE_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 210044 29 100.0 32 ............................. CCGAATAGAGTTGGAGCTCCATGTTGGTATAA 209983 29 100.0 32 ............................. TCCGTTGAGCACTGGCGGGGCTGTGTAGAGTG 209922 29 100.0 32 ............................. CGACGGCGGCGGGTGTAAATGTTTTTGAGCGT 209861 29 100.0 32 ............................. ATAGTTTTGCTTCCTGTTAAGGGTTTCCACAC 209800 29 100.0 32 ............................. CCGCAGCCGTCGCCAGCAGAGCAGAAAATCAA 209739 29 100.0 32 ............................. GGAATCAAGGGCGCAGCCGGAACGCTGGGAGG 209678 29 100.0 32 ............................. CAGTACATCAGTCACAAAGAGATTGCGGCCTG 209617 29 100.0 32 ............................. GGAGGCTGTAGACGTGCTGGCACGCCACAGCC 209556 29 100.0 32 ............................. CGCATGACAACTATCGAACTGAACGACCTGCT 209495 29 100.0 32 ............................. CAAATTCTGGGGATCGCATGACCGGGCCACTA 209434 29 100.0 32 ............................. TTTTGAGTATTCGGGTCAGCATTATGGTGCTG 209373 29 100.0 32 ............................. AGTTGGTTTTTAGAGATAGCGTGCTGTTTAGC 209312 29 100.0 32 ............................. CAACCACTCTCCGTCAACCTGATCGCCGCTTT 209251 29 100.0 32 ............................. TCCTACGCTCCTCTAGCCCCTCAGCTTATATT 209190 29 100.0 32 ............................. AATTTCGAGCTGGCGCGCCTGATAAGTCGTCA 209129 29 100.0 32 ............................. GCTGAGGCGTTACTTTCTGTACCACAACTGCC 209068 29 100.0 32 ............................. CGTTCTGCTGGCCTGGGCGGCAGAAGTTGGCC 209007 29 100.0 32 ............................. CTGGTGGTCCAGGAGGCGCAGGAAACGGGTAA 208946 29 100.0 32 ............................. GCAACCCGGCTGAGGGAGATTCTGAACCAGCA 208885 29 100.0 32 ............................. AGGGATTTATTACTGAGCGATCAACGCCTTGT 208824 29 100.0 32 ............................. GCTGTAGCTGATGTTATCCTTGCACCGGCAAA 208763 29 100.0 32 ............................. AACGAGCAAGATATTTTAGAAATCCTCCGCAT 208702 29 100.0 32 ............................. GAAGCTGGAAGCCGAGACGATCATGGCCGAGC 208641 29 100.0 32 ............................. CTACGGCGAAGTTTGCAAATGCTGGCGATAAA 208580 29 100.0 32 ............................. GCAACAATTATCACGACGGCGTTTGAGCAGTG 208519 29 100.0 32 ............................. AAAGTGTGCCCGAGGGAATTGACCCGGGCTGG 208458 29 100.0 32 ............................. ACTGCCGCCGCTACGAGCTGCACCGGCTCAAT 208397 29 100.0 32 ............................. AGTTGCAGCGCCAGCTCGCCTCCGGGCGTCTT 208336 29 100.0 32 ............................. TCATTCAGCGGGAGAACCGACCCGCAGACCAT 208275 29 96.6 32 ........T.................... GCCGCTGATGGATTGCCGGACGCCAGGCCAGC 208214 29 100.0 33 ............................. ATACCTGGCAGGAAATCGCACTTGCCGCCCTGC 208152 29 100.0 32 ............................. CCGGTAAATCCGGCTTTTTTTGTGCCCGCGTC 208091 29 100.0 32 ............................. AAAATGCGCACCTTTTCGAAATCCACGAATTC 208030 29 100.0 32 ............................. TAGGATAGTGTAGCGCGGCCTGATACAACGTA 207969 29 79.3 0 ..C........C.T....C......C..A | ========== ====== ====== ====== ============================= ================================= ================== 35 29 99.3 32 GTGTTCCCCGCGTCAGCGGGGATAAACCG # Left flank : GTTCTGGCTGCCGGTGAGATTGAGCCGCCAAAGCCTGCGCCAGATATGTTGCCCCCCGCAATTCCTGAGCCTCAACCGCTGGGGGATAGTGGCTATCGGGGGCGCGGCTGATGAGTATGGTCGTTGTGGTCACAGAAAATGTACCGCCGCGTTTGCGGGGAAGGCTTGCCATCTGGTTATTGGAGATCCGGGCTGGGGTATATGTTGGTGATGTCTCTAAACGCGTGCGGGAGATGATCTGGCAGCAAATCATCCAGTTGGGTGGGGTTGGAAATATCGTTATGGCCTGGGCGACAAACACGGAATCAGGTTTTGAGTTTCAAACCTGGGGGGAAAACAGACGCATGCCGGTAGATTTAGATGGGCTGAGGTTGGTTTCCTTTATTCCTGTTTAAAATCAATAATTTAATAGCTCTTTAATAATGTGGAAATGTTGGATTAAAGTTGGTAGGTTGTTGTTTGCTGAAAATTTCCATTAAAAACAGAAAGATAAGATTAGT # Right flank : CAAATCTTACTCCGTATAAAAATAAACAGAAAAATGCCCACGCACCGTTTGGGTGATGCACTTTATCAGGCTTTTTTCCCCGCTTTCGCCAGTTCCTTCACCAGTGGCAGCATAATGCGCACCACGTCCCGGCTGCGGTGTTCAATCCGTTGTGGGAGGGCCTCGTCGATATGCTGCAGATTATCCAGCCTGACGTTATGCCAGCTCGATCCCTGTGGGAAGGCTTTTGATTTTGCCCGCTGCTGATAACCGTCTTTCTTACCCAATGACCAGTTAGTGGCCTCAACATACAGCACCGGGATCCCGGCTTTATCGAAAACTTCACCGTCATTACAGCATCCGGTGCCTTTCGGGTACGCGGCGTTACCTCCCGGGTTGGTCGCGGCAAAAATCCCGTGGGCGCGCGCAATAGCCAGCGCGCGATCACGGGTTAATTTACGCACCGGGGCAGGGGTGGTTTTTCCGCTGTTAAAATAGAGCTTATCGCCCACGATTAAGTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //