Array 1 8626-8121 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSBD01000019.1 Lentilactobacillus parabuchneri strain FAM23169 FAM23169_scf_0019, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================= ================== 8625 29 100.0 32 ............................. TAGGGCTTTTTACACCGTTGAAGCTAGATGCT 8564 29 96.6 32 ............................T TCAAGTAGTTGTCGATAAGCCTACTGGTATCA 8503 29 100.0 32 ............................. GTCCTTCTTGCGCATGTCATTAAGATTATCCG 8442 29 100.0 32 ............................. TCAAAACTAATTTATGGGTGGCAAACTACGGT 8381 29 100.0 32 ............................. AAAAAGACCGTTTCACCGGTCATTGAGTTTGT 8320 29 96.6 32 ...................A......... GTTATCTGATTCATTAGTTACTCTCCCTTTAG 8259 29 93.1 81 .......T..........A.......... ATCCGTTCTGACCTCTTGGCCCACTATCTCACGTATTCCCCACGATCCTACAATTGGGGCCGTGAACTTCGCAGAAACCAA 8149 29 93.1 0 ..........................A.A | ========== ====== ====== ====== ============================= ================================================================================= ================== 8 29 97.4 39 GTATTCCCCACGTATGTGGGGGTGATCCC # Left flank : GTTAAGTGGACGAGAGATGTTCACTATAATCTGCTAGAAATGAACCGAGTAACCTGGCGGGCTTTAGTTCAGTCTGCTATTCAAGAACTAGGCGGGCAGGCCACTTTAGCTCAGTTGTATGATATTTTAAAAGGATGTAAGCGCGCTGAAAGTGTTTCGGATTGGAAAGCGAAAATACGGCAAACACTCCGTGCTAGTGGATTTAAACGTGTCAAAAAAGGTACTTATACGTTAGATATTAGCTAGGTTGGGTCCTTTGAATTTGGTTGATGAGAATCTATAAGTTTCTCCATGTTCCTAATTTTTGCTGAATACTGTGTCAAACTGAGTTTAGTAGTTTGCGAAAAAGAATTCTCCTGTGATAAGGAATGGATTCCTCGTAAATTGGATAATGTATGCCAACACTTAGATGATTTCGATCAATTAAACTTAAAGCTAAAAGTCATTGAAAATGAGTGTTTTGCTATTTTCAAATGGCTTAATGGCAGCGTTTCTTTAGT # Right flank : GTTAAAGAAGTTATGACCAACGGGGATTTAGGAGAACTTGGGTTAACATCTAAGCCCAAAGCGACCACAAGTACTAGTAAACGAACTGTTAGCTCAACCAAGAAGGCATCCAAATAGGATGTTTTTTTATTATGAGGATGAATTAGCATATAAATCCAAGCTAATAGGCACTATCATTATTACGTGCTATATTATCTTCGTAGAGAGTCAATCGCTGAGTGGCGTGGAAAACCACTCATCACTCTTCCCATCGTGTTGAACAGCGGATAGCCCAATCGGCTGACTATAAATTTATTTCAATAAATTTAATTTATCCGGCGGTGAATAGCCGGAACGGTCCTTTAGGGATTCGTTAGTAGACTGATTAATGATGAAAGAGCCACTTTTCGCTGCCCACACCGAATGGTTTTTCTTCATGCTGATGCAAGGAATGGAATCTTTTCGGCTAAAATGCTGGACTTCTTTAAAATTATTGGTAAACTTCAGTTGCTTATGAAAGG # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:-0.54, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGTATGTGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 12643-12432 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSBD01000020.1 Lentilactobacillus parabuchneri strain FAM23169 FAM23169_scf_0020, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 12642 29 96.6 32 ............................T ATCGATAACACCATAGGCAATCGCAACTGTGG 12581 29 100.0 32 ............................. GTCTTCAGCAGTTAGGAAGCTGTCGCCGTTTT 12520 29 100.0 32 ............................. GGAAGCTCGAGTTTATCGGCTTCCGTTTTCAG 12459 28 79.3 0 .......T.....A....A...C-.G... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.0 32 GTATTCCCCACGTGTGTAGGGGTGATCCC # Left flank : ATGATTTAATTAGTCACGGTGTTGATGCAGACTTGTATGAGCTTCAGGGTGCTGAGCATATGGACGAATTGTTTATGCAACCAGAAATCACTAAATTAATAATTGATTTTTTGACTACACACTTTGGGAATGGTGCGTAGATTCTAGAACTTTTTCGAAATCAAGGAAATGGTCTTTAACTAAAATTATTTTTCAATGAAAGCGAACTTCTGAAACAATTTATAAAGAAGTTCGCTGTTTTATTTTGGATATTTGTTAACTGAAGTAAAAACCTTGTGCTGAGGAAAATGAGGGGGAGCTAAAGTAAATGTTGAGATGTCGGCCGAATGTTAGTAATATTAGTGTGTGCGGTGACGTGGATCAGGGATCGAAAATAGGCTATTCATACCTTATGGGTGATGCAAGTGGTCTTTTGTAGTTGGCAAAACTTTATTTGAATAGAACTAATGAAATTTGACTGTTTTCCACTTTAAGAATGGCTATAACAAGGATTTTTTAGT # Right flank : CTTCAATAATCAGTGATCAAGCTGCTAAGATTAAACAAGATACTGAGTTCCACTTGGGACTTAATTTGGCCATAGTTTTAGGCCAGTTAAAATCGAACGAATAATCATAACCGTACACGCATTTTTAGTTAGGGGGTATCAATTAAATATGGCTCATACAAAACCAAACTTAATTACAGCAAAACAGATCGACACTTTTATTAATTCAAATGCAAGCAATGTGGGACAATTGGATGATAATACGCCTTTAAAGAAATTGCCTAAAAGCTTTAAGCCTTTAAAGAAATTAAAAAATCAGGTAGCGTCTCAGGCAATTATCCAAAATTTGTTAAAGGAACAGTATTTTTGGAGTACCCAAACAACAATTTTAGAGCCAGTGTCCACCTATTTGAACACTTTGGTTGATAGTCAAAATAAAGCAGTCTTAAAACAGTTAACCTCACAAGATATCAAGCTAATTAATTTGTATCAAATCATTAATCAACTACAAACTAATGGTG # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGTGTGTAGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.50,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 40683-40226 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSBD01000020.1 Lentilactobacillus parabuchneri strain FAM23169 FAM23169_scf_0020, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 40682 29 100.0 33 ............................. AATTTGACCAACGCGCCGTTTTTGATAACTAAA 40620 29 96.6 32 ............T................ GAGGTCGTACCTCGTAAAACAAACGTGAAAGG 40559 29 100.0 32 ............................. TTAGGCTTGCTCTCGGTATCAACAGAACTAAC 40498 29 100.0 32 ............................. TATACCTATTCATTAACGGCTAAGGAATGGCA 40437 29 100.0 32 ............................. CTGGGGATATGACCAAGAAGCAAGCCAATTCT 40376 29 100.0 32 ............................. CCGTATTCGGTAATCATTCAGGTGATTTAGAG 40315 29 96.6 32 ..............C.............. TTAGTGAAGCTGTTTGAGTTGGCATTTTCTCT 40254 29 86.2 0 ....................A..G..TT. | ========== ====== ====== ====== ============================= ================================= ================== 8 29 97.4 32 GTATTCCCCACGCATGTGGGGGTAATCCT # Left flank : ACAGTAGTTTGAGCAGGACACTTAAATCATATTCACGTGGCCGGCCAAAGATATAGGGCTCTTTAATGGCTAAGTCTTCAACGACATAATTGATAAAACGGGCCGGATGGTTTTCCTTGGACTCCCAATCAGTTGCGATACTCAAAACGGTTTGGTTTATGTTATAATTATTTTGCATATTGGAACGTCCTTTCGAGGATGATTTCGTAGTCATCGGGGTTCGGCCGATGACTTTTTTTATTTTAGATTATAACAAAAGCGATTCATCGAAAGAAACATTTTTCTTCGATGAATCGCTTATTTTTTGGGACTTATGTCACAGCCCCTTCAGTTCATATTTGTACGGACCGCGTTTTTGTATTTGTGTTGTGGCATTTATGAATTCGTTTATAGTAAACTGTTAGTAGGATCGTTAGATAAAGGGGTAGAGTAAAATACGAACTAATGAAAAATGGTCATTTTATAATTTGAGAATGGCTATGTTTCGGGGTTTGTTTAGT # Right flank : GCCCTCATAAGCTGGTAGCAGGCTATTCGCGTGAAGATCCATTACTGATCAATAAAAAGAATCGTGATCTCAGGATAATTTGCTTCTCCTTCGAATCACGATTTTTTGTAAGTATTGAACTGGATTTATCCTTCAGCGTCATGAATCGCATCGGAAATATTATCAGCCGAAAAATCATGATTCATGTATGCGTCATTGCTAATCGGCAAATGCTGTTCCAGCGTATCAAACAACTGATAGGAAACGGTGCCTTTGTCTAAATGAAATGCCAACACATGGCCGCCAAACTTATGATCATCTGATAAAAAGTGGTGGTGGAAACCCGCGACCGCAGCCCCGTCAAATAATTCCGGAGAATAGTAGCTAATCATTGTTCCATTGACCTGATCACGGGTAAAGATGCTTTGATTACGAGCGGTTTCGGCTAGTGTCTGAAAAGGTGGCACGGATTTCTTAACCGCCCGAGTTTTTATTCCGGAGAAAGTGCCAGTAATTTTGAT # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCATGTGGGGGTAATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //