Array 1 157371-157508 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGHK01000001.1 Staphylococcus argenteus strain F87619 adMaN-supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ================================ ================== 157371 25 100.0 31 ......................... ACCCAAACTTGTATTGCTTGTAGAATTTCTT 157427 25 96.0 32 ......A.................. CACCCCAACTTGCATTGTCTGTTGAAATTGGG 157484 25 96.0 0 ...C..................... | ========== ====== ====== ====== ========================= ================================ ================== 3 25 97.3 32 TTCGAATTTCTCTGTGTTGGGGCCC # Left flank : TATGATTAATCATGAAACAAATTAAACACGAGCTTGATTGCACATCATCATTAGCGCAATCAAGCTCGTGTTTTCTATATTTATTTTGCGGTATAAGATATTTCATCTTCATGATCGACTACATTTACAATGATATGATCATCTTCGAAGTACCACAAATCTTTTTCTGCAACAACAATATTTAATCCATCATAATGTTGCTCATAGCCAACATCAACGTTTTCTTTAGGTTCAACTGTAAAAGCAGGACTAAACCCTTGCTTGAGTTGGAATTCGCCACCATATCTTACGAAAAACACAAGTACTTTATTATTTTCAGGTAACTCAAGTTCATTTTTAAACCAAGATACAGCTGCATCAGTAAGTTCTATTTGCATAACAACGACCTCCAATATTATTACGAAATGGGCGTGAGACAGAAATCATAAATAAATACTAATTTCTATAAAAGTATTTATTTATGATTGGTTCCCAAACTTGCATTGCTTGTAGAATTTCTT # Right flank : CCGGTACTGAATTGAAAAAGCTTGTTGTATGTGCATTTTCATTCTGTTAACTATTGCCAATATAGCATTTTAGGGGCTAGGACATTGATTTATGTCTCGATCTCAAATGTTCTTATAAAAAAACTAAGTATAATTGAATTTTAAGTTAAAATAATTGTTTTTGCAAAAATAAAATAATCCATCAGCTGCAAAATTTTATGCAATGATGGACTACTGTCAAAAAATTGTTACATCCATTTAATTTTAGGTTCTTCGCCTCTGAAAATTCTTGCAATATTAGAACGATGTCTAATGATTAAGATTATTGAAACTAAGAAACTAACGACTAGTAAAATATAGTCTTGAATAATGAGTGAACCGATGACACAACAAATTGCTGCCACAATACTTGCTAATGAAACGTATTTAAAAATCTTCAGAACTACAAAGAAGATGATTGCAAGTATTAACAAAAGTATTGGGTTAACACCTAATACGACACCGGCACTTGTTGCAACTGC # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGAATTTCTCTGTGTTGGGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 4165-3843 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGHK01000053.1 Staphylococcus argenteus strain F87619 adMaN-supercont1.53, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 4164 36 100.0 34 .................................... TGTACTTAAGATTTCATCAACTTTCTTTTGTACT 4094 36 100.0 35 .................................... CCGAATTTTGATTCTTTGTTTGTAAATAATGCTCT 4023 36 100.0 36 .................................... TTAAATCTTTGATTGCTCTTAGCTCTAGTTATGTAT 3951 36 100.0 38 .................................... CACGCTGTAGTGAAGTATAGAAACGGCATGAGTACAAT 3877 35 91.7 0 ..............................-...GT | ========== ====== ====== ====== ==================================== ====================================== ================== 5 36 98.3 36 GATCGATAACTACCCCGAAGAATAGGGGACGAGAAC # Left flank : CCGAAGAATAGGGGACGAGAACTTAATTGCATTATCAAATGTATATGCTGGATTCCA # Right flank : GTAAATTTAATTACACTCTAAAATTCGTGAATTTTTAATGGAATACGCATGGATTAATTTTTAGGGGATGGAAAATGAAAGATGTTATTTATGTAGAAAACCATTACTTTGTTACCGTGAAAGAAAATAGTATTAAATTTAGAAATGTAATAGATAAAAGTGAGAAATTTTATTTGTTTGAAGAAATAGAAGCGATTATTTTTGATCATTATAAAAGCTATTTTTCTCATAAGTTAGTAATTAAATGTATTGAAAATGATATCGCTATTATTTTTTGTGATAAAAAGCACTCTCCATTAACGCAACTTATTTCTTCTTACGGTATGACTCATCGTCTTCAAAGGATTCAAAGTCAGTTTCAATTATCTGGGAGAACTAGAGATAGAATTTGGAAAAAGATTGTTGTAAATAAAATTATTAATCAATCAAAATGTTTAGAAAACAATTTACATAATGAGAATGTGAAGTTATTAGTAAACTTAGCAAAAGATGTTAGTTCT # Questionable array : NO Score: 5.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATCGATAACTACCCCGAAGAATAGGGGACGAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: R [matched GATCGATACCCACCCCGAAGAAAAGGGGACGAGAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.50,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : III-A [Matched known repeat from this family], //