Array 1 188119-184130 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAJSG010000004.1 Klebsiella pneumoniae strain KPM_46 NODE_4_length_437346_cov_16.8026, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 188118 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 188059 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 187998 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 187937 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 187876 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 187815 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 187754 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 187693 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 187632 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 187571 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 187510 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 187449 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 187388 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 187327 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 187266 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 187205 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 187144 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 187083 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 187022 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 186961 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 186900 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 186839 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 186778 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 186717 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 186656 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 186595 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 186534 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 186473 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 186412 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 186351 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 186290 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 186229 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 186168 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 186107 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 186046 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 185985 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 185924 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 185863 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 185802 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 185741 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 185680 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 185619 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 185558 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 185497 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 185436 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 185375 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 185314 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 185253 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 185192 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 185131 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 185070 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 185009 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 184948 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 184887 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 184826 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 184765 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 184704 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 184643 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 184582 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 184521 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 184460 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 184399 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 184338 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 184277 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 184216 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 184158 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 66 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //