Array 1 69326-72592 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTOW01000009.1 Candidatus Manganitrophus noduliformans strain Mn-1 Ga0306812_109, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 69326 37 100.0 34 ..................................... TCAACCCAAGCCTAAAACCAATAGGAGGTAAAAA 69397 37 100.0 36 ..................................... AGCGAAATGCGATCTGATGCGTTGGCCAATCTGCCT 69470 37 100.0 35 ..................................... TCAACACCTCCCTTGGGGAGACCTGGGAGGAACAA 69542 37 100.0 34 ..................................... TCGGCGGCAAGCAGACGATCTAAGGAGGCGGCGT 69613 37 100.0 36 ..................................... CAAACTGGTGGTGCGCTCAATCTCAGGTGCCGTCCT 69686 37 100.0 37 ..................................... GTCACCACCAGCTCCACATCCTCGCCCCCCTCCCGAA 69760 37 100.0 37 ..................................... TTTTCCTCGTCTGTCAATTCCCAGTACGCTTTATCTT 69834 37 100.0 36 ..................................... TATTAGCAGGGGCAGGGGAAGCAAGGCACGCTAACG 69907 37 100.0 35 ..................................... TTCCTCGCTTTCGACTACCTCTTGGCAGTAGACAT 69979 37 100.0 35 ..................................... TTTCCGAGTTAGTAGAGTCAGACGGACTGCCGGAA 70051 37 100.0 37 ..................................... TGCGAGCTAAATCTAGAAGAGGAGGAAGAGGGTCCCG 70125 37 100.0 36 ..................................... AAGATCAATGCCTTTACGTCCCATCTCCCACCACCA 70198 37 100.0 37 ..................................... TTGAATGCGTTTCCGCCGTTATGCTCTAGGCTGATTG 70272 37 100.0 36 ..................................... AATGCAGCTCACCACCCGGTGAATCAGAATGCGCGG 70345 37 100.0 35 ..................................... AGCGGCGGTGTGGGGGCAAACGATCAGTTCAACGT 70417 37 100.0 37 ..................................... AACCTAATACCCCTACGGTAACAACTCCGAATGAAAT 70491 37 100.0 36 ..................................... GAATCTGATCCACCTGCCCCGTGCAGCGAAAACAGA 70564 37 100.0 35 ..................................... GAAACGACGACGTTCCGCCGTTCGATCTCGTCGAG 70636 37 100.0 37 ..................................... CGATCTGGACAAACCTTGCACCGTGTTCGACCTTCAT 70710 37 100.0 36 ..................................... ATCGTGGACGGCGGGACATACTCCCCGCTGCATCCG 70783 37 100.0 37 ..................................... AAGATCCGATGTGTACGCTCCAGCCGTCGAAGACCCA 70857 37 100.0 37 ..................................... GATAATTGTCAAAAGCCATCTCTTCAAGAGATTTCTG 70931 37 100.0 39 ..................................... TCTAACTTCTTCTCAATACTATCTAATGACTCTTGCACA 71007 37 100.0 37 ..................................... TCCGGTATCGCGGGAAGAAAGCGAAAGAAGATCCGAG 71081 37 100.0 36 ..................................... GAACCCTCCCTTCGAAAATGGTCAGGATATCGACCA 71154 37 100.0 35 ..................................... CGATTGGGGAAGATGGAAAAGAGGCGATTCTTCGG 71226 37 100.0 36 ..................................... CATCCAGCCCTCGTCGTCGGAGAGGAACTTCTTCAG 71299 37 100.0 37 ..................................... AGCATAAATGCCGGCCGCCCCTCAAAGAGCGGGACGG 71373 37 100.0 36 ..................................... TTTATGAGCTGTGGTGCCGGCAGGCGGGGAAAGACT 71446 37 100.0 37 ..................................... TCGACGAGCTGGGGGCCGGTGCTGTGGAGTTCTTCCG 71520 37 100.0 37 ..................................... GGGCATCCGGACCGGCCTGTCAGATCTGCGGGCTGAA 71594 37 100.0 37 ..................................... AGATCAAATCCTTTCCACACGAATTCGGCCAATACCA 71668 37 100.0 36 ..................................... CTACGACATGATCGGATTTCGAGTGTTTGACGGACT 71741 37 100.0 37 ..................................... CGCGGGATCAAGAGGCACGGCGACCCATCGGAGGGGG 71815 37 100.0 38 ..................................... ATTGCGGAGGGGGGGATCGAAAAAAGCCGAGAGAACAA 71890 37 100.0 36 ..................................... AGCGATAATACCAGGGAAGCGCGGCAAGGCCCTTGC 71963 37 100.0 35 ..................................... AGGGTGGCCCGGGTGGATCCGGTAGCCAGTCACAA 72035 37 100.0 37 ..................................... AGGTGGACTTTCCTTTTGACGCGCCGCTCGGCGGCGG 72109 37 100.0 37 ..................................... TTTCTCTCCTGCTCTTTCCTCGCTTCCTCCGCTTTTT 72183 37 100.0 38 ..................................... ATAAGGACGGCCAAGAGATAGACCGCCACGGGGTTTTC 72258 37 100.0 36 ..................................... ACTCTGCCGGTATGTCGCCCGAATCAACCCCGTTGA 72331 37 100.0 39 ..................................... AGCAGGAGTTAGAGCGCACAAAGCGGGAACTGTCAGCAA 72407 37 100.0 37 ..................................... CGCAACGGTGATTTAGTGCTGATACAACGAACAGATT 72481 37 100.0 38 ..................................... ACTTCCCTCTCCGATCTTGTCAACGCCCGGCTAAACGA 72556 37 97.3 0 ..................................G.. | ========== ====== ====== ====== ===================================== ======================================= ================== 45 37 99.9 36 GTTGAAGAGAAGGTTCCACCAAAACAAGGATTGAAAC # Left flank : TCTTTATTTATCCGACGGGACTTTAGCCCCGCTCGACTACAAATATACGGAATATAAAGAAGGGGTCTACCGGACCCACCGGTATCAATCGATTCTGTACGCCCTTCTGATTCAAGATACTTACCAGCGGGAAGTAAAACGCGGATATGTTTGCTATATCCGAAGCAACAGTCTGATCAAGGAAATCCCATATACGGAAAAAGATTTTCAATCGGCCCAAGCCGCGATCGAGGAAATTTTGCGGATTACTCAAAGAGGATATTTCCCCAAAAGAACCCCCCACCGCGTGCGGTGCGTCGATTGTTGCTACAGAAATATTTGCGTTCAATAAGCTTTTTTATCAGACTTATTGATTAATTTAAGAAAAATGTCTTGAGAACCATGTAATAGGTAAAAAACAAAATAGAAAAAACGATGAAACGGGAAAGAAAACTTCATAAAAAGGCCTTTTTCAAAAGAATCAAAAACATTGTTTCAAAAGAGATTTCAGACAAAGTGCG # Right flank : CTATAATTCGGGCAACCATTTGATGATGTCCGACATCAGTAAGATCCGGATGGAGATACCCTATCCATCTCGGGCGATGCCATCTCCCAAAGAGCAGGGCGGTCAATTCATTACGATTGACGCCGATCTGAAAGACCGTCCTTCCGTGGTTTATCTCCGTTAGAAGTAAAATACAATCTAGCAGGTAGAAAGAAAAGAGCCGGAAATCGCAGAGGCCCTGGGGTCCACGCCACCAGGGCCTTCTTATTTTGTCCGAAGGAGTTGGTTCAGAGGAAAGAGGGCACCCGGTATTCTCTGGCACTTACCGGCTGGCTGATAGACAACATCCGGCCTCTATGAGGATGTAAGCGATGAAACTCAAAGACGATCCTAAACAACTTCCGAACGGTGAAAGAGAGAGCATGCAAGATTTTATTCTTTGCGATAGGCATCGCCTCAAAGAACAGAATCGATTTCTAAGGCAGGGCGATCCTAAGATCCAGAACAGGATCCGAGGACAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGAGAAGGTTCCACCAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA //