Array 1 26776-27104 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LWUB01000044.1 Nocardia gamkensis strain NRRL B-24450 contig00044, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	=====================================	=======================================	==================
     26776	    37	  91.9	    36	G.....C...............A..............	AATCACGGGCGAGACGTCCGGACCGGTCAGGTGCCG   	
     26849	    37	 100.0	    33	.....................................	ACCTACGAAGCCGAAGCGTGGAATGCCATCCGC      	
     26919	    37	  78.4	    35	GA..A...G.G...TCA....................	TGGGACATGGTGGAGATCACCGAGCACTACGGGCA    	
     26991	    37	  91.9	    39	G...............G.......T............	TGGCCGTCGCTGCAGCGGGAAGTGTCGTGGGTCAACACC	
     27067	    36	  83.8	     0	G...........A.T............A.....-..G	|                                      	G,A [27097,27099]
==========	======	======	======	=====================================	=======================================	==================
         5	    37	  89.2	    36	ATGGCGGTCGCCCTCACGGGCGGCCGAGGATCGCAAC	                                       	       

# Left flank :   TGATCGACCAGATCGTGACGAATCCCCGCCGTATTCTCACTGTGCGCCCACAAACCCGACGACAAACCTCCCCCTCATATCCAGAGCAAATTCGGCACAGGCAGCGACCGTACGCCAAGGGGCCGACAACCCGTGGCGCATCACAGGATTAGGGACAGCAGCATGCTGCCGCCCCCGTTCCGAACTACATCGAACGATCTTCACCCTCGCGGCGCTGATCATGAGCGCGAAGGAAGTCGACGCCGAGACGGCGATCCCACTGACCGTCCTGCTCGGGTCCGGGATCGTGACGTGCATAATGACTCCGACCAACCGAAAGACCGATACCAGCGACGGATCGACAGGACCCGCGCACGGGTTTGCGCGTCGGAGGCAAAAACCTCCAATGCACAGAGATTCCCAGGGAGGTTCCGAACCGGCGAACAGCAGTTATCAACTTCAACACACTCGAAGCAGTGCCTGCGCGCGGCCCCAGTCGACATCCGCCCAGCTCACGCACC
# Right flank :  GCCGACGCGTCCATGACTCAGCTCAAGGCGGAGCACCACATGGCCAAGCGGACGGCAAGAGTGCTCCGGGAGGCCGGAGCGACGATCCGGCCCAGAGGTGGACGACAGCTATAGGTGACACCCGGCTCGAACTATCCACTACGCCACGACTGGTAGCTACTGACGAAAACAATCAAGGCGCTGCACGGCCTGCGCCGACTAAGCCAAAGCTCGAGGCGGCGTTCGAGGATGGCATTGGCGAATTCGATTGCCAGCCTGGCCTCTTCGCGGCTGGCGTGGGTATACGCCGACCATGACAATGCGCGGTTAGGGTCCTCGGCGGCGCGGATGTTCCAGCACCCACACCGTCGTATCCACCGACCACACCGGGAACAGGTCCCTCGACAAGCGAATGACCGCGCGCATCGCGCCCCGGTCACCAACTCCTTGCGGACCGACTGTTCATGTTCATCCGATGACGCCGCCGCCGATACCGGCATCAGCACCGCTGCCCGCCGATG

# Questionable array : NO	 Score: 3.53
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.46, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATGGCGGTCGCCCTCACGGGCGGCCGAGGATCGCAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGACGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.90,-2.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-9] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [26.7-35.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.65,0   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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