Array 1 147145-148006 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACNBM010000001.1 Pseudomonas sp. FW507-14TSA Pseudo11_contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================================================================= ================== 147145 28 100.0 32 ............................ ATTGAAGGCGGGCCGTTCATGCAGGCAACCGA 147205 28 100.0 32 ............................ TGGGAGCTCAGGCAGGTATCTTCGATCTGCTC 147265 28 100.0 32 ............................ GCCATGGGTGTCAAAAAGGGTTGTGCGACCTT 147325 28 100.0 32 ............................ TGATCATGAGGTCGTGATTGTCTTCGACCCCA 147385 28 100.0 32 ............................ ATCGCCACGAAGGACGGCGACTACCTGCGCAT 147445 28 100.0 32 ............................ GTGGCGACACCGGCAGTGGTGGAGCTGGTCAG 147505 28 100.0 32 ............................ AGTCCAGTACGGGCATTCCCTATGTTGAATCA 147565 28 100.0 32 ............................ CGGCCCGGATAAGTCGGTCGCTAGCACCAGGA 147625 28 100.0 31 ............................ GCTTGCGCCGCCCCCACCGACCGCCCCGGCG 147684 28 100.0 32 ............................ TGCACCGGCGTTACAGCCGCATCCTGCTGGAG 147744 28 100.0 32 ............................ AAGGACAAGTCATGCCTGAAGAAAGAACGGTA 147804 28 100.0 32 ............................ AGAGTCGTATTCTTCCTGGCCGAGATAGTCGC 147864 28 89.3 87 ...........C.C...T.......... CCAGTCCTTCAGCGTCCTTCGGTGCTGTTTATCTCGATTGCCGAACAGGCAGGCAACACACAATCCATCATCAATCCATCGGCACCC 147979 27 85.7 0 ...-.........G........G...G. | T [148000] ========== ====== ====== ====== ============================ ======================================================================================= ================== 14 28 98.2 36 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GGCCCTGGGCCAGTTGCTGGCCATCGATTGGCTGACCGGTATGCGTGACCATGTACAGATCGGCCAGCCCTGCTCGGTGCCGACGCCGGTGCAGCATCGCCATGTCAGCCGGGTACAGGTCGATAGCAGCCCGGCACGCCTGCGTCGCCGCCTGATCAAGCGCCATGGGTTGACCGAGGACCAAGCCCGCCAGCGCCTGCCCGACAGCGCGGCGAAACGTTGCGACCTGCCGTTCGCGGTGATGCGCAGCCAGACCAGCCATCAGCTGTTCAACCTGTTCATCCGCCACGGCCCGTTGCTCGAACAACCCCAGCCCGGCACGTTCAACGGCTATGGCCTGAGCTCCAGCGCGACAGTGCCCTGGTTCTGACCCTTTTTTCCGGGTGCCGTGGAGCGCTTTGTAAAATCAATGACTTACAAAGCGCTTCAGAAAAAGGGTGTACAGCAACCTTTAACGGCCTTTCTTTTGAAATTCAGGAGGTTATAGAGAAAGTGCTCTA # Right flank : ACCCGCTGCACCCGTCGCCGCTGGCCTGGGACTCCCGGGCCAGGACGCGGCTTTGTCACATCCCCTTCATCGGCGCTGGCTAAGGTGGCCTCTTTTGACCATGTCAGGGAGTCACCATGAGCGAGTTCAACCTCGGCCGTCGACGGATCATGCAAATCGCCGGGGCGGGGATGTTGCTGCCCAGCCTGGCGCCGGCGGTGATCGCCTCGGTCAAGGATCGGCCCAAGCTCACCGATGGCGTGCAGTCCGGGGACTTGCAGGGCGATCGGGCGATCATCTGGAGCCGCAGCGACCGCCCGGCGCGGATGGTGGTGGAGTGGGACACCCGCAGCATGTTCACCAACCCGCGGCGCCTGGTGTCGCCGCTGGCTGATGCCCGCACCGACTTCACCGCCCGGGTGGACCTGAGCGGGCTGCCGGTCAACCAGGCGATTTTTTATCGGGTGACCTTCGAGGATGCCCGCACCGGGGTGGCCAGCGAACCCTGGTTCGGCCATTTG # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.32, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //