Array 1 18354-20435 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALJN01000008.1 Streptococcus oralis SK304 ctg120008662254, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 18354 36 100.0 30 .................................... TGGGAGTGAAGATAGATGAAGCAAGTCTAG 18420 36 100.0 30 .................................... AAACCTTTACTTTCGTACCATGTTAGTCCT 18486 36 100.0 30 .................................... AGTAAATGCTAAAGAATATTTGATTGGACT 18552 36 100.0 30 .................................... GAACGCTGGTTGAAACACACTGATGGTCAT 18618 36 100.0 30 .................................... CATAGTTTCCTTAGTGCTAGTCAATGCCAC 18684 36 100.0 30 .................................... ATGAATAATAGCCCTAGTAAAGCTTTCACC 18750 36 100.0 30 .................................... CCGACAGGAATCACAATTCCTGCACATATC 18816 36 100.0 30 .................................... AAGCCTTGACCGAGTTTTTCTATAACGGGT 18882 36 100.0 30 .................................... TGCTATTCCAAAAGAGAAAGAAAAAGTCGT 18948 36 100.0 30 .................................... GGGCGTACTTACATACATCGACAAGGAAGT 19014 36 100.0 30 .................................... TATCTTGTAATGCCTGCCAGTTACGAACTT 19080 36 100.0 30 .................................... GTGAAGCTCAGTATACCTATGATTACAACA 19146 36 100.0 30 .................................... TTACCAACGTGGCTATCTTGTTCATAACCA 19212 36 100.0 30 .................................... TTTATCCTCCAGTACCTCCCCAAAATCATG 19278 36 100.0 30 .................................... TATAAAGAATACAAGGATCAAAACGATTGG 19344 36 100.0 30 .................................... TCTCGGATTTCGTGTACGCGAGCATAAAGA 19410 36 100.0 30 .................................... AAAGCGATATAATAGGGCTATGAAGAGTAG 19476 36 100.0 30 .................................... ATTTAAAAGTCATATAACATCGAGTCCACT 19542 36 100.0 30 .................................... TTTAGTCAAGCCATTCATAATAATTATTTA 19608 36 100.0 30 .................................... AGGGTTCTCAATAATTGCACACATTTTCTT 19674 36 100.0 30 .................................... AATTTCATTCTTGACAGCTTCTTTTCTACG 19740 36 100.0 30 .................................... GTAATATCATTAACTTTCACATTTAAAGTA 19806 36 100.0 30 .................................... TTAAATTTCGAGTCTAAAAAAGATGCTGAT 19872 36 100.0 30 .................................... TCGTAGCCTGCGACTTAAACGCTTCAAGTT 19938 36 100.0 30 .................................... TCAAAGGATTAGCAAGCTGTGTACTATTTA 20004 36 100.0 30 .................................... CAATTAGGTATTCGCATGCCGGATCCGTTA 20070 36 100.0 30 .................................... AATATTATCAACGGTTGCTTGAGGATTGGC 20136 36 100.0 30 .................................... TCTTACAAAGAAAACTATCAACGAAGCAAT 20202 36 100.0 30 .................................... CAACCAGATACGGAAACTCACAAGGCGCAG 20268 36 100.0 30 .................................... CGACCGAACTGAGGATATTTCTGCAATACT 20334 36 100.0 30 .................................... TCATCGTCTCTTCATAACTCAAATTTATCC 20400 36 91.7 0 .................................TCT | ========== ====== ====== ====== ==================================== ============================== ================== 32 36 99.7 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAACTCAATGACAAACCAGAAGTAAAATCCATGATTGAAAAGCTGGTAGCTACGATAACAGAATTGCTGGCATTTGAGTGTTTAGAAAACGAATTGGACCTAGAATACGACGAAATCACCATTCTGGAGTTAATCGATGCGCTAGGGGTCAAAGTTGAAACTCTGAGTGATACACCTTTTGAAAAGATGCTAGAAATTGTCCAAGTTTTTAAATATCTTTCCAAAAAGAAACTCCTTGTTTTCATCAATGCATCCGCCTATCTATCAAAGGATGAGTTGGTAAATCTGATAGAGTATATCCAACTCAATCAACTAAGGGTTTTATTTGTCGAACCTCGAAAAGTCTATGATTTTCCGCAGTATGTGATGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAACAATTGGAACCTAACGAGCTGAAGTCTGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : TACACAAAAAGCTACTCATTCTTTGAGTAGCTTTTTAACTATCCCCCTACATATGGCTCATTCCCTTATAGCATAGGAAAACGGCTAGTGCGATAAAAAGTACAGTTGCTCCGATTCGCTGGCTAGTGCTATACATTCTTTTTTCCCATTTGACTGGAAAGATGACTGCTAGAAAGGCACCTCCTACTGCACCACCGATATGGCCAGCTAGACTGATTCCTGGAATCAGAACACTTCCAATGATGTTTATCACGAAAAGTGTCAGATAGGATTGCCCCAACTGCTGGATATAGGGGCTGCGAATCGCATAGCGCAAAACGATAATCGCAGCAAATAATCCATAGAGAGAAGTGGAGGCCCCTGCTGCTACAACTTTCGGTGTGAAAGCAAAAACAAAGAGATTGCCCATCATTCCTGATAAGAGATAAAGAAGGAAAAATTGCTTAGAGCCGAAAATCTCCTCCACCTGTTGTCCAAGAAAGTAGAGTGAAATCATATTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //