Array 1 78216-78732 **** Predicted by CRISPRDetect 2.4 *** >NZ_BILG01000022.1 Klebsiella pneumoniae strain TUM14133 sequence22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 78216 28 96.4 33 .............A.............. CGGCTCTTTTTTATCTCCTTCATCCTTCGCTAT 78277 28 100.0 33 ............................ TGATCGGCGTGCCGTTTGTTGGACCCGAAATAG 78338 28 100.0 33 ............................ CGTCATCAGCGCCTTGTTCCAGCGGCGACCACC 78399 28 100.0 33 ............................ TATCGTGCAGAGTCACAACCTGACGGGATTATC 78460 28 100.0 33 ............................ TCGTGCATGGTGAGGATTCTACAGTCGCACCAT 78521 28 100.0 33 ............................ TACCTCCCGGCGTCCGCGCCAGGGCGATCACGT 78582 28 100.0 33 ............................ CCTGCAGCTGGCCGTCGAGCTGACGGATGCCGG C [78591] 78644 28 92.9 33 ............T.T............. TTCATCACGTGTGAGCGGATTTGGCTCTATCCT 78705 28 89.3 0 ............T......A.......T | ========== ====== ====== ====== ============================ ================================= ================== 9 28 97.6 33 GTCTTCCCCACACGCGTGGGGGTGTTTC # Left flank : TTAGCGTTGGCGAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGACTCGACGGCGCAGCGCAGGATAACAGCCTCCAGCTACCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGCGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGCGGTAACTTCGCGAAGCCACGGAAGGCAAGCGCCAGGATGACGCGCTACGTTCTGGGGATGACAAAAGCGTTTTACCCCCGGCTGCGGGCCGGGCAGGCCAGTAGGGTAGACCGGTCCAGGTCAGCAGCAAATCGACGGTGGTTATATGGTGACATACTTTTTCGTTTGATGAATGTTGATGCTGATGCGGAAACCCTGCGGAGTGCAATTGTTGTAAATCTGGCGTTTTAATACGCCGCTAAACACAATATGCTGGT # Right flank : TCGCCTTTCAAGTGACGACAAGTCACGTCTGTGCGCATTTCTCAGATGAAAGGGGATTCCTGACGTAGAGGCATCAATGCCGTGACATAGTTATCCTTAATGTACATCAATGTCTTCGAAATTTCGTTTGGCCAGCACAGTCTCATATGTTTTTTGTATGATTTTACTTATAAATATTCGTGAACTATGTTTGTCCTATACTTTCTTTAGGGGCATCTAAATCATTCGAGTTTATTACTCGTCTGGAGATATTGTTCTTCATATTAATTATTTATAGCTTTTTATATTATTATTTTTGGCTTTTATCTTTAATTCAGTGTGTTGTGGACATTTTTGATTTTATAAAAAGTTATTTATAAGTTTCCCGGTTTTTAGTATTAATAAAGGGCACATGTTTTTTAAGGAAAAATTCCATGAGGCGCTTGATCAGGGTTTCGCTACAAAATCAACATGCCATCGCGGCGATAAGTTTTGAAAACTGTCCAGCGAAAACCCGGATG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACACGCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4635-6309 **** Predicted by CRISPRDetect 2.4 *** >NZ_BILG01000041.1 Klebsiella pneumoniae strain TUM14133 sequence41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4635 28 100.0 33 ............................ CAGGTTCGTACCGGGGCCGTAGAGGTCTGTTTC 4696 28 100.0 33 ............................ CACCACGATCTCTATCACCGACGCGCCGACTAC 4757 28 100.0 33 ............................ TAGCGGTGGTGGCCATCGATAACCTTCACGCCC 4818 28 100.0 33 ............................ CGCTGTATGCCCCCCATCCTTCGCAAGCACTAC 4879 28 100.0 33 ............................ CGATGACAACTTTGCCTACTTCGCTGCGCTGGC 4940 28 100.0 33 ............................ TTCCTCTTCTTCCTGACAATCAGCGCAGCGCTG 5001 28 100.0 33 ............................ TGCGGGTGGATGACAATAACGCCTGGCGCGCCG 5062 28 100.0 33 ............................ TTCTTCATTAAGCCAGGCAGAGCCGCCATGAAT 5123 28 100.0 33 ............................ CCATTTCGATCTGGTCGTAGACGTCTTCGCGGT 5184 28 100.0 33 ............................ TTCGATGGGGTCCGACTATATCCGGATAGTAAA 5245 28 100.0 33 ............................ TCAGGGTGTCGAATTTCTTCTTTTTCCTGGTAT 5306 28 100.0 33 ............................ CTCAGATATCGAAATAGCCTGGCGTCAGGCAAT 5367 28 100.0 33 ............................ CAGATCAAAGCCTGGACTGAGCGTCTTAGTGCG 5428 28 100.0 33 ............................ TCGCGAAATTCCCCGCTGCGACCTCTTATAAAT 5489 28 100.0 33 ............................ CCAAGCTGGTGCACGCGGGCAATTCTGGCGGCA 5550 28 100.0 33 ............................ TCAGCGGATCTGGCATACGTGCAAAAAATATCG 5611 28 100.0 33 ............................ CCTGTTAAGGATGACGCGGGGAAATGGGTTATC 5672 28 100.0 33 ............................ TCGATGGCGAGCTGCTGGTGAAAAAGTCGATAC 5733 28 100.0 33 ............................ TCCAGGCCAGATCTGTTTGGGTTGGTGTCGAAG 5794 28 100.0 33 ............................ TTGAACCTCCCGCATCTGGTCAGGCAGGTTATC 5855 28 100.0 33 ............................ CAACCGGCACCGTGGCTGCAGGTGACGATTCCA 5916 28 100.0 33 ............................ CACATTGATGAGGACTTTTTTAAGTCTAATCTG 5977 28 100.0 33 ............................ TAATGGATCATCTATCACCCTGGCAAATATTTT 6038 28 100.0 33 ............................ TGAAGGTGAGCGCCAAAAGGAGTGGAAGCATGC 6099 28 100.0 33 ............................ CGGCTGCGTTATCCGGCAGCACGAACTGGACCT 6160 28 100.0 33 ............................ TGACCTTAGAGGCTTCACTCAGTGCCACTTTTT 6221 28 100.0 33 ............................ TTGTGAGGGGTCTACCAGCATTGGCGTACTGGA 6282 28 75.0 0 ........T..A..T.....A.GC...G | ========== ====== ====== ====== ============================ ================================= ================== 28 28 99.1 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAAGAACGGCTCTGTATTGATTTGGCATTTTCACTCTCGAGGGAAATGGCGGGCCGCTACGATAAACACAAAGTCTCTGAGGCATTCAGAAAGCGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATCAATGAGCTGATGGGAGGGAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTGCGTGGACGAATGAAGCTGTGGTTTGTCGAACCACGGCCAAATGTTTTTGTCTCAGGCGTCAAAGATTCGGTCGCGCAAACCGTTGTTGATTACCTGTTGCAGTACACGCCTGTGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGTTATGAAATTCGCTACAAGGGTGAGGTCAGAAAGCCGATTATTGATCTCAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGGATATTGTGGTTAAACTCTCGCTCTTTCACAATATGTTGGT # Right flank : TTGAATAAATCGAACTTTTGCTGAGTTGAAGGATCAGATCACGCATCCTCCCGACAACTCAGACCATTCCGTGGCAAAGCAAAAGTTCAGAATCACCAACTGGTCCACTTACAACAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //