Array 1 24590-25243 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCNV01000015.1 Mesonia aquimarina strain MCCC 1A11700 NODE_15_length_46835_cov_66.925119, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 24590 46 100.0 30 .............................................. TGGAATGCAGCATTAAACGCCAATCCTATA 24666 46 100.0 30 .............................................. TACGCAAATATTACCCTCGCGTGCCTTTAT 24742 46 100.0 30 .............................................. GAAGCAAATAACGAGCGTAAGCATAGTAAG 24818 46 100.0 30 .............................................. AGTGGAAGCCAATGATTCTTACTATGTTTC 24894 46 100.0 29 .............................................. CACAAAGCACGGGAACAAAAAACACATTC 24969 46 100.0 30 .............................................. GGAGGTTTTGAGTGTTGGCGCAAGTAGCAA 25045 46 100.0 30 .............................................. GCATTGCTTTTTTAAAGCCTACAGGATTGT 25121 46 100.0 30 .............................................. CAGCACCTTCTTGATAATAACCAACAAAAG 25197 46 87.0 0 .C................................AA....A.T..T | A [25239] ========== ====== ====== ====== ============================================== ============================== ================== 9 46 98.6 30 GTTGTAAATCATGATTAAAAATACAATTCTGAAAGCAATTCACAAC # Left flank : TCAAAAGTCGCGACTATGAACAAATAAATAAATTACTATGGAAAATTCACATTTTTCCCGATTAAACCAGTATAGAAGCATGTGGGTACTTGTATTTTTTGATTTACCAACCGAAACCAGAGTTGAACGGAAAGCAGCCACTCGATTTCGAAAACAATTAATAGACGATGGTTTTGGGATGTTTCAATTTTCTATTTACAGTCGGTTTTGTGCCAGTCGTGAAAATGCAGCGGTACACATTAAACGAACTAAAAATAATTTACCTAAAAAAGGAAAAGTAGCGGTGATGCAAATAACCGACAAGCAATTTGGGATGATTGAATTATTTCATGGAAAAAAAGAAGTTGAACCTGAAACACCAGATCAACAATTAGAACTCTTCTAATAAATAGAATCAAAAATGTTAGGCAAAGCAGAGTAAATACCTAATTTTCAACGCACATTTTTTATTCCTAAAAACAGCCTTAAAAAACAACATACCAGACGGTTACGACTGGTAT # Right flank : TCACACCACTTAAGAACAAGCTTTACAAAAGCCGGAAATAACCAAATTATGCACCTTAGCGACATAACCTTCCGGCAGGGGTACCGAAAGCGCTTGTTTTAAACACTCTACCGTTCCGCATTGTAAACACCTAAAATGAATATGATTATGCGAGTGGAGCTGCTTTTTTTCATCACAGTTAGCACACATGGCAAAATATTGTTTTCCATTATCTCCTACTACTTTATGTACTTTGCCATCTTCACAAAACCTATTTAAAACTCGATAAATAGTAGCCCTGTCCATAGCAGAACTAACCCGATCCTGAATCATCTCATGACTTAAGGCATTGCCCGATGCGGCAAGTACTTCTAATATTTCCTCTTTAGAGGCGGTGCTTCTTCGTTTCATAATTTTATTGCGACAAAGTTGCAATATTACAAAATTATAGTACATTTGTCAAGTAACTAATGCGACTTAATCGCACTATAAATATAAGGCTATGAAAAATAACACAATAG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAAATCATGATTAAAAATACAATTCTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 43078-47223 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCNV01000009.1 Mesonia aquimarina strain MCCC 1A11700 NODE_9_length_164847_cov_72.327951, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 43078 46 100.0 30 .............................................. CCTAGTGTAGCGATATGCTGACCCATTACA 43154 46 100.0 30 .............................................. CAAGAGATCACAAAACCCTGCAAAGTAACT 43230 46 100.0 30 .............................................. TTGTTATACGTTGTTGTGTGCCATTAGGGT 43306 46 100.0 30 .............................................. CTACCGTTTAATACTAATGATAACGAACCC 43382 46 100.0 30 .............................................. GCTCTAGCTTACTGACTTATTGCATTGATT 43458 46 100.0 30 .............................................. TATAACCGTCTTGTAATGCTTCCCAGTTTT 43534 46 100.0 29 .............................................. GGGTTCAACCTTTGGTATTTTGTTTTGTT 43609 46 100.0 30 .............................................. TGTATAACAGTAATTTGGCTACGTGATTAT 43685 46 100.0 30 .............................................. AAAAGCATTTTGATTACCACGACACCGAAA 43761 46 100.0 30 .............................................. AGCCGTCACGCCCTATTATTTATTACTTTT 43837 46 100.0 30 .............................................. AATGAAGGCGAAGTACTTGCGAAACTTCAG 43913 46 100.0 30 .............................................. CTCTGTAATAAGACATAGTTATATTTTTAA 43989 46 100.0 29 .............................................. AGATAAAAAAATAAACTCATTAAAGCATA 44064 46 100.0 30 .............................................. CTGTAAGCGTACAATTTTTAACAGGCGGTT 44140 46 100.0 30 .............................................. ACGGAACAGGAAACACCCAAGTGAATGAAT 44216 46 100.0 30 .............................................. ATTGCGTATGAGTGATAATTTTAAATTAAC 44292 46 100.0 30 .............................................. ACTAATCACATTTCCACTCTTATTTACTAA 44368 46 100.0 29 .............................................. CACCGCAAACAAGCTATCTCAATCGAGCG 44443 46 100.0 30 .............................................. AAATATAACCGTATCATCAAAAATTTTAAA 44519 46 100.0 31 .............................................. TGATTGATAACTATATTATATCGCATCCTAA 44596 46 100.0 30 .............................................. AGTCAGGGACACCGGAAACGACTCCCATAG 44672 46 100.0 29 .............................................. GTTTATTATTCAGGCGAAAAAGAATATAA 44747 46 100.0 30 .............................................. GCAGAATAACGGAAACGCCAAAAAACTTCC 44823 46 100.0 30 .............................................. CGTGGCGATTTAATGATCTCTAAAATTTGA 44899 46 97.8 30 ...A.......................................... ATTTAATGTCTTTCTTGAATTCTTCGATTA 44975 46 100.0 30 .............................................. CTGCAGTAAGATCTTTAAATCTTGTTGCTT 45051 46 100.0 30 .............................................. TACATACGTGCGATGTTTAGGCAATTGCTC 45127 46 100.0 30 .............................................. AACTCCGAGCTGTTTCATTTTTCCAGCTCT 45203 46 100.0 29 .............................................. AGGGTTACAGATTTTATAAATGGAAAAAA 45278 46 100.0 30 .............................................. CGTATTAAGAATGTTATAATTTTCTTGAAG 45354 46 100.0 30 .............................................. AAATCTACCGGGAATGCGGTAGGCTTTACT 45430 46 100.0 30 .............................................. TTCAGGTTTAAAAACACCAATTGGAATGGG 45506 46 100.0 30 .............................................. GGAGAAATGTATTTCGTTATACATGAAGAC 45582 46 100.0 30 .............................................. AATACATTAATTCGCCATTGTTCTCCAGCA 45658 46 100.0 30 .............................................. ATATTGCTACCAATAAAAAAGAGCTTCAGA 45734 46 100.0 30 .............................................. TATTTAGTTTAGTTTGTGATATTACTGCTA 45810 46 100.0 29 .............................................. AGCAGAAGAAAAAACTAGAGATCGGGATT 45885 46 100.0 30 .............................................. TATAATACTCATCGTTTATAGTACCCTCTA 45961 46 100.0 30 .............................................. TTGTTTATTGATATTAGAATTACTCATACT 46037 46 100.0 30 .............................................. GGGGCGTTTTAGTAGTATTTCTATGATATG 46113 46 100.0 30 .............................................. TATAGATTTTCTTGTGGCGATTTCTTGATA 46189 46 100.0 30 .............................................. GCGGAGCTTCAACTGTAATTTTAGAAGCCG 46265 46 100.0 30 .............................................. GCTTGCATCAAATCTTTCCAGGTAATTACC 46341 46 100.0 30 .............................................. TATGACAAATATAAAATCAGACCTCAAGAC 46417 46 100.0 30 .............................................. TACTATTTGCATAACATTGGTAATATTATA 46493 46 100.0 30 .............................................. CTCAACGATAAACTGAACAACCGCACTGGC 46569 46 100.0 31 .............................................. CAGCGCAAACACTACTAGCAGCGGAAAAGTC 46646 46 100.0 30 .............................................. CACAAATCAGATTATAAACAAATTGAAATG 46722 46 100.0 30 .............................................. AATGATGCTTTCGACCAAGGCCAAAGACGT 46798 46 100.0 30 .............................................. GCCAGCATTTCTCATTACGATCATACTTTG 46874 46 100.0 30 .............................................. TTCTGGAGTTATTTCTAATTGAAATTGTTT 46950 46 100.0 30 .............................................. GACCAGAAAATAAGAGAGCAAAAAAAGTAT 47026 46 100.0 30 .............................................. AAGATTTTAAACTGGCTTTCTTCAATAACA 47102 46 100.0 30 .............................................. GCAAGTAGGGCAAAAAAAGCTTTGTATATC 47178 46 95.7 0 ..................G.T......................... | ========== ====== ====== ====== ============================================== =============================== ================== 55 46 99.9 30 GCTGTAAATCATGATTAAAAATACAATTCTGAAAGCAATTCACAAC # Left flank : CTCAAGTGAAAACCATAAAATGGATTAATACTATGGAAAACTCACGTTTTTCAAGACTAAATCAATACAGAAGCATGTGGGTACTTGTATTTTTCGATTTACCAACCGAAACCAGAACCGAGCGGAAAGCTGCAACAAGATTTCGCAAACAACTTCTAGATGATGGTTTTGGAATGTTTCAATTTTCTATTTACAGTAGGTTCTGTGCTAGCCGTGAAAATGCAGCAGTACATATTAAACGAACAAAAAACAATCTACCCAAAAAAGGAAAAGTAGCCGTAATGCAAATAACCGACAAGCAATTTGGTATGATCGAACTTTTTCACGGAAAAAAAGAAATAGAGCCTGAAGTACCTCACCAGCAATTGGAACTTTTTTAATTAAAAAAATAGCATTAAAAATAACTTATCAAGCAAAGCAAAAAGCTTATTAAAAAGCCTATTTTTTTATTTCTAATTATACATTTAAAATACAGCATACCAGCTTTTTATCACGGGTAT # Right flank : CGGGTAACATTCGTAGGCAAGTACGATCGATACCGTAAATCATAATTATACATACAATGTTAATTAAAATTAATTATAAAGTAAATAAGAATTTGTAATTATTTCTTATCTTAGTATAAATTAAGTCAAATAAAATGTGACCTATTCGGTTACCTCTAATTTACGAATAGACTTAAAATACTGAAATCACTAAGACTGCTGAAGTGTATTCTAGTTCTCTCATCCCGACTGAAACTATTACTATAAAATAGTTTTCAAAGACAATTAGTTGATTTTCAAATAATTGTCTTTTTTTATAAAGTATTAAGAAGTTTCTGAATAGGTCTAAAACGTGAGTAATTCGTGAGTTATACGTGAGTTCATTTTTAGTTTCTTATCTTCACATCACTTAAACAAAAGAGCATTTTGTGAATTTGCGGAATATAATAAGCAAGGTAATTCACCGTAGTGAATATAAATAAAAGACTGCAATCTAAATACTCAAAAATAGATCAATCTTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTAAATCATGATTAAAAATACAATTCTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //