Array 1 210242-209021 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAJHJR010000002.1 Streptococcus salivarius isolate AMBR037, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    210241	    36	 100.0	    30	....................................	GCGAACAAATACCTAGCGATTTCTCACACA	
    210175	    36	 100.0	    30	....................................	ACGTTCTATTTTCAAGCTCTTTGAAATTAC	
    210109	    36	 100.0	    30	....................................	ACTGTAACAAGAGAGAGTGACACCGTCTAT	
    210043	    36	 100.0	    30	....................................	AAGCCTCCCTAGAGATACTTAATCAATGGG	
    209977	    36	 100.0	    30	....................................	GTGGTAATTGATTAGCTTATTCTACAAATT	
    209911	    36	 100.0	    29	....................................	CGGAATTGAGGACATCTTTAAGCAAATCA 	
    209846	    36	 100.0	    30	....................................	GGGGTTGAAATCCCTTATATTGACAAGTAT	
    209780	    36	 100.0	    30	....................................	TTGACGGTTCTGATTTCGAACGCACAGAAC	
    209714	    36	 100.0	    30	....................................	TTGTCACTAGCTCACGAAAATACCAAGCTC	
    209648	    36	 100.0	    30	....................................	GCATCATAGCATGGAAGCAGCATACATAGA	
    209582	    36	 100.0	    30	....................................	TTGTTACTGGATTTATTGCAGGCGTGCCAT	
    209516	    36	 100.0	    30	....................................	TCAATACCAGTCCACTTGATAGGGTCTTCG	
    209450	    36	 100.0	    30	....................................	GTGGTATTGCTTCAGGTAAGGCTAGACGTA	
    209384	    36	 100.0	    29	....................................	CCTTGCATGGTTGTCTGGTTGGATTGCTA 	
    209319	    36	 100.0	    30	....................................	TGCCAGCATCATTCAAAGCAATCGCTGACC	
    209253	    36	 100.0	    30	....................................	TTGCCCTCGGTTCACTGATAGCGTGGGTTG	
    209187	    36	 100.0	    30	....................................	GTGGACGCTCATTAAACGCTTCATTCATTC	
    209121	    36	 100.0	    30	....................................	TGAGCAGTTTTGGACGGAAAGCACAACCCC	
    209055	    35	  83.3	     0	T..........T.-...........G........GT	|                             	
==========	======	======	======	====================================	==============================	==================
        19	    36	  99.1	    30	GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC	                              	       

# Left flank :   TTGATAGTTTTATTTCAGAGGAATCTTATGATAGTTTTTATAAGCAAATTGGTCAGCTAGTCAAAAAGTATCCAAATCTAAACTTAATTTTATTTCCAAGTAATCAAGGCTATTTAAAGATTGATGAAGAAAATAGTAGGTTCGTCAATATTTTATCTGACCAAGTGGAGCATTTGTACGATATTGAGTTTATGTATGACAGGGTAAAGAAACATTATCCAAGTAATAATTTCCCACCGAGAGAGGGTTTTAGGAAATCCTTAGAGAATGTGACGCCTTATTTATTGACAAAAATGCTGAGACAACCTAGTCTCACACTTGTTGATTCTGTAATTTTGAATATCCTAAATCAGCTGTTTCAATTTAATTACCGTATAAGATATTCACAAACTCCTGATGAGGAGCTATTGCATAGATATTTAGAAAGTAAGAATTGACAAGGACAGTTATTGATTCTATAATCACTATGTGGGTATAAAAACGTCAAAATTTCATTTGAG
# Right flank :  TTGATTAATTCAACTAAAAAAGCCAGTTCAACTGAACTTGGCTTTTTAAAATACACGATATACATAAGGGTTGTCAGGCTGTCCGACCTCTTTGACCTCAGTCAAATTAAGGATAGGAAGGCTCTGTTTGAGATTTTGATAGTAATCCACAGTGATGGTACCAGTGACTTTTACCCACGTATTGTCCTTAAAGGTTTGGTCACTTCCTGTCGTCGCCAGTCCGTAAACACCTGAATCGGCGATACAGTGGATAATCCCAAAACGGAAGATGAACTGATAACCCTTGGTTTGTGGGTCATTGTAAACAAATCCGGTATAGGTGACCTTCTTGCCTACGAAATCGTTAGGATAGAGGTAGATGAGCTCCATGACTTCCATGTAATTTTCCGTGGTAATCTGGATGGTCTCACGTCCCTTGTACTTGGCGAGCTCTCTGGTCATTTCCTTCTCATAAGCTGAGGAGGTGAAGTAGGAGCTGGTGTCTGGCTTCAAGTACTGAA

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.20,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [6-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,4.91   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//