Array 1 22370-22724 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE387198.1 Tuberibacillus calidus DSM 17572 H532DRAFT_scaffold00031.31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================== ================== 22370 30 100.0 35 .............................. TCGGTTTTACCGCTTTGTTATGGAGGTACATCATG 22435 30 100.0 35 .............................. TAATCATGGACAAAAAAATCGCTCTCATAATGTTC 22500 30 100.0 35 .............................. CGTTCAAAAATGCTCGGGCATGGGAGCGACCAGTC 22565 30 100.0 35 .............................. ATGGTTGCGATGTCAGCCTGAATCGTATCAATTTT 22630 30 100.0 35 .............................. CTTGCATGGTTACCGCCCCTTTTTGGCCTGTTTCC 22695 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =================================== ================== 6 30 100.0 35 GTTTTCATCTTACCTATGAGGAATTGAAAC # Left flank : AATTAAAATTAAGTCAATAAAGACAAATAAAAAATGTCGTCGATCCTCAGTAGCGTTAAAAACCCCAGAGATCGACGACATTCTCTTATCACAAAAATCCCTTCAGTAGCGCGGCTTTCCGGAAAAACGAAAAAAATAACAGGGAAAAAAGGATTTTTTATATCCGACGAAGAATATTGATATAATAACAACTTTTGGGGTTTTCATCTTACCTATGAGGAATTGAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATCTTACCTATGAGGAATTGAAACATAGCCAGATTCAAGGAAGCTCAAGTTTCCGCAGA # Right flank : CCGGAAAACGATGGAAGGGGTTAAAAAATGGATGTTTTGCAAGTGGATATTGAATATGCGGGATACGACGAGAAAAGCGACGCCATTCACGACATCCGTTTTAGCGTAGGCTCCGGTGAACTCGTCGGGTTGATCGGGCCAAACGGAGTGGGGAAAAGCACGGCGCTCAAAGCCATCCTTGGACTACTGCCTCGATGTTCGGGCAAAGTGCTTTTTTCCGGAAACCGGCAAACCTATTCTTACATACCCGAGCGGCCGATCTTGTACGATAAGCTGACGTTATGGGAACATTTGGAGCTTGCCGGCGCTGCCTATGAAATGGAGCAGAGGGTGTTCACGGTGAAGGCGGAAGCTTTATTGTACCGTTTTCGTATGGAAGGCGTCCGCCATCATTATCCTTGGAGCTTTTCCAAAGGCATGCAGCAAAAAATGATGCTCATTCTCGGCTTTTTGATCGAACCGGATGTCTACGTGGTTGACGAACCTTTTATCGGCTTGGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 33978-34271 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE387198.1 Tuberibacillus calidus DSM 17572 H532DRAFT_scaffold00031.31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 33978 30 100.0 36 .............................. AAGCTAGTCGTTGATTTTTTAAATGATGATCATGGA 34044 30 100.0 35 .............................. ACCAAAAACTGTTTCCCATTCCAGTGAATCTTCCA 34109 30 100.0 37 .............................. GCGGCAAATAACGATAACTGCCGACTTGTCCATCACC 34176 30 100.0 36 .............................. TCCCATTCTATATCCTCTAAATTGCCAATAGGATGA 34242 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 100.0 36 ATTTAGATCTTACCTATGAGGAATTGAAAC # Left flank : CCATACCGTTCCATGTGGTAGGTGATTAAATGTTTGTCATTTTGGTTTATGATTTTGCGGAAAAGCGGGTCGGCAAAGCGCTAAAAATCTCGCGCAAGTATCTTAATTGGGTTCAAAATTCCGTTTTGGAAGGCGAGATTTCCGATGCGAACTATTTCAAGCTGAAAAAAGAATTGCAAGACCTGATGGATCCGGATGAAGATTCCATCATCTTTTACACATTCCGGTCACAAAAATATTCCAAACGGGAAGAATATGGTGTCAAAAAAGGCGGAGATGAGAATATAATTTAAGAGTTTTTAGCAACAATTTGAGTTAAGGAAGAAGTGGCACATTGTCGTCGATCCCGAGTAGCGTCGAAAACCCCGGGGATCGACGACATTCTTTTATCACAAAAATCCCTTCAGTAGCGCGGCTTTCCGGAAAAACGAAAAAAATAACAGGGAAAAAAGGATTTTTTATATCCAACGAAGAATATTGATATATCAGCAATTTTTGGG # Right flank : CGAAA # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAGATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 2610-2971 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUMM01000068.1 Tuberibacillus calidus DSM 17572 H532DRAFT_scaffold00059.59_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2610 30 100.0 37 .............................. TGTCACGTTTGAGATTAACAATCACATCATCGACCGG 2677 30 100.0 37 .............................. CAAGCTGAAAGAATGTGCTGCCAAGGTCAATCCAGTT 2744 30 100.0 36 .............................. TGGGTAATTGTTCTCCCAGATGTTCCGGATGCCACG 2810 30 100.0 36 .............................. TCGGCGGTGTGCATCGAGATTTGGAATTGATTGCAA 2876 30 100.0 36 .............................. TATCCACAGCATGAACAAAGTTGGCTGGATGGAAAG 2942 30 83.3 0 ..........G............AA.C..T | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 97.2 37 GTTTTGATCTTACCTATGAGGAATTGAAAC # Left flank : GTTTGGTTTTTTTAATGCAGATGAAGAAGTTATAATGGCTATGCAGAGGAAGTAAAAGCTATCGCGTTTTAGCGGAATGTCCTTTAGCTGGTAGGCCAACATGGGTTCCGCTATTGGCGAAAATCGCCAGTACTTTGGTGTGTGCCCTCGCATGTCATTAGTTCATCGGAGACATCAAATTAACGAAATTGTTAACTTCAGTCGATGACGGTATGGAAACGTTCCCGAAGATCTACCCAAGAATGCGGGACGTATTGGTCGTGTGTGTATGTGAACTTGAAAATTAACCTCCATCTTATCGAATGTAAGGTTTGAGAATAAATCGACTTATTTGTGTCGTCGACCCTCGGTAGCGTCAAAAACCCCGGAGATCGACGACATTCGTTTTTCGCAAAAATCCCTTCAGTTACGCGGCGTTTTGAAAAAAACAAAAAAAGTAACATAAAAAAAGGATTTTTTACACCCGACGAAGAATATTGATATATCAGCAACTTTTGGGG # Right flank : TTACCCCCACGCCCAAAGGGTGCCATCCTCTAAGATAGCAAGTATAGGTTTCGCCCATAAGGAATTAAACGCAGCAAGGCTAAGTGAGGTAATTCGTGCCTCAAGTCCGGACGATGATGCTACAACGGATTGTAAGATAATTATTGATAGCGGTATGTTCTCGACAGAAAGGATCTTTTAACTTGGATTGTCAAATTTTCCTAATTGGCAGGTTTCATTTATGAGAAATAGAGGCTCAGTGGTAATAGTAGAAAATGGGAAGGTTGTATTAATTCAACGAATTAGGGATGGTTCTGTATATTATGTTTTCCCTGGTGGTGGAATAGAGAACGGTGAAACACCAGAAGCTGCAGCTAAAAGAGAAGCATTAGAGGAATTAGGGGTTGAAGTAAAAATTAATGAGTGCCTTTCAAAAGTTGAATACAACGGGACGCAATATTTTTTTCTAGCTGAAATTATTTCTGGGGCTTTAGGAAATGGTCAAGGTGAAGAATACACGG # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //