Array 1 87183-86605 **** Predicted by CRISPRDetect 2.4 *** >NZ_SSBI01000017.1 Streptomyces sp. A1277 NODE_17_length_130067_cov_157.430645, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 87182 30 100.0 31 .............................. CCAACAAGCAGGCGGCGCCGCAGATCCTCGT 87121 30 96.7 31 .............................C GCGACCGGCTCGCGGCCGAGAAGCGGGAGCA 87060 30 100.0 31 .............................. GTGGTCGTGCAGGAGCGGGAAGCCGTCACGG 86999 30 96.7 31 .............................T CGCTGTCCTCGTACGCGGACGTCCGCTTGGC 86938 30 96.7 31 .............................T CGCTGTCCTCGTACGCGGACGTCCGCTTGGC 86877 30 96.7 31 .............................G CCGACAGCACGAACGAGATCAGCCGATCGCG 86816 30 100.0 31 .............................. TCACCTTCGGGCGCACCTCGCGGGGCTGGGG 86755 30 96.7 31 .............................T GGCTCAGGAGCTGCGCCCGCGTCTCCGGCTG 86694 30 96.7 31 .........................T.... CCGTCGCGACCCGGGTGCGGTTGTGGGAGGG 86633 29 80.0 0 ...........A.CC-.......C.....C | ========== ====== ====== ====== ============================== =============================== ================== 10 30 96.0 31 CTGCTCCCCGCGCGTGCGGGGATGGCCCCA # Left flank : CACGACGGGCCGGATGCCTACGAGGACGAGGAGATGCTCTGGTGACGGTGATCGTGCTCACCAACTGCCCGGCCGGTCTACGTGGCTTCCTCACGCGCTGGCTCCTGGAGATCTCCGCAGGCGTCTTCATCGGCAACCCCTCGGCGAGGGTCCGCGACGTCCTCTGGGCGGAAGTCCAGGAGTACGCGGACCAGGGCCGCGCCCTGCTGGCGCACACCGCCAACACCGAGCAGGGCTTCACCTTCCGGACACACGACCACAAGTGGCACCCGACCGACCACGAGGGCCTGACCCTGATCCGCCGCCCGGCCGAGGGCGCGGCGACGAGGAAGCAGCCGCCGGAGGGCCCGAAACCGGGCTGGAGCAGAGCGGCCAAGAGGCGGCGGTTCGGGAGGGGGTGAGCGCTCGATGTGTAGAAGGTTGTTTTGGGCGTATCGCCGGTTTCGGTGAAAGTGGTGCGGAACGGCTCTCTGGCGCGGTAAAGCCGCAGGCCAGGAAGC # Right flank : TCACCCCGCCCCCAACGACTCCCCGAACCCCGCAGCCAGTGGCATCCGCAGTCCCAACGGCGGCGGGGCCGCCAGCGCGTCGGTCACCGGGCGGGTGTACCCCCGCCCGAAGAGGGCGCCCCGTACGAAGTCCGAGGCCAGCGCGGTGACTTCCGCGCGGTGTTGGCGTAGCGCGTGGCCGTCGGAGTGGACCTCGAAGCGGCAGGTGTCGCGGTTGGACTTCTTGGCGCGTTCGGCGAGGCGGAAGGACAGTTCCGGGTCGCAGCGCGCGTCGTTGGTGCCGTGGATGAGGAGGACGGGGCGGCCGACGAGGTGTTTGACGGGTTCGGGGGCGGCCGCCGGGTCGCCGGGGAGCCAGGGGGCGAGGGCCAGGACCGCGGTGACCGCCGGGTGGCCGCCGGCGCGGAGGGCGGCGCGGGCGCCCATGCCGTGGCCGGCGAGGCAGACGGGGACGTCGCCGTAGCGGCGTACCGCCTCGTCCACCGCCCACTCGGCGTCGG # Questionable array : NO Score: 5.57 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGCCCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 97190-100693 **** Predicted by CRISPRDetect 2.4 *** >NZ_SSBI01000017.1 Streptomyces sp. A1277 NODE_17_length_130067_cov_157.430645, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 97190 29 100.0 32 ............................. GGCGGGTTCGATTGCTCCGGCCTTACACAATT 97251 29 100.0 32 ............................. TTCGGGCTGAATGCGAAGGACGCCCTCGGGCT 97312 29 100.0 32 ............................. GCGTGGCCGATCGGCGTGCAGTGGGAGGAAGA 97373 29 100.0 32 ............................. AGCTCGTCGCCCTGGCGAAGACCAAGGTGGGG 97434 29 96.6 32 ............................T CCCGCTGGACCGCGCACCGTACGAAGCGCTCG 97495 29 100.0 32 ............................. TACGGGATCTACACCGGCCACGGGAACATCAC 97556 29 100.0 32 ............................. TCAACGGCTTGATCACGCTCGACGGCAGCCAG 97617 29 100.0 32 ............................. AGCGGCTCCGGTCGGCGGAAACTCCCGCCTGA 97678 29 100.0 32 ............................. TCCGTGACCGCGCAGGTCGGGCAGCTCGTCCG 97739 29 100.0 32 ............................. CTCTGGACCGTCAGCGGCGACGGCGGCGACGG 97800 29 100.0 32 ............................. CGCAACAAGATCACCACCGCGTACGGTCTCGT 97861 29 100.0 32 ............................. CGGCCCCAGTCAGGCATTCGGCGCCGCCCAAG 97922 29 100.0 32 ............................. GGGCGCCGGGCCGGACGTCCGGGCACGGCGGT 97983 29 100.0 32 ............................. GCCTGGAACCGGGACGACTGGATCGGGGCCGC 98044 29 100.0 32 ............................. TGATCATGAACCGGCCCGACAGCCCCGGGGCG 98105 29 100.0 32 ............................. GTCATCGGCCCGATCAACGGCTACGACCTGTA 98166 29 100.0 32 ............................. GCGAGAGCCCAGGCAATCAGCCGGTAGTGCCA 98227 29 100.0 32 ............................. ACCCGCAACCAGACGCCCCGGTGAAGATCCGC 98288 29 100.0 32 ............................. TCAGTGAGTTGGTGGCCGCATCCCGTTGTGCT 98349 29 100.0 32 ............................. GTCGTGGCCGAGCGCACCCGGACGTGGCCGTA 98410 29 100.0 32 ............................. ACGGCTGCGGTGCCGAGGTTGGTCAGCAGCAG 98471 29 100.0 32 ............................. CGGTGCCAGGCCGGGGCGGCCTCCCCGAAGAA 98532 29 100.0 32 ............................. GGTGGCCGTCTTCGTGACGGGGGCGCGGCTGG 98593 29 100.0 32 ............................. ACCTGGAAGAGCATGTACTTGAGGGCGGCACT 98654 29 100.0 32 ............................. CCGCACGACCCCGACCACATCCGAGGCCGCGC 98715 29 100.0 32 ............................. TCCCTCACCCACCGCATCAACATCGGCGCCAT 98776 29 100.0 32 ............................. AGGAGGTGCCTGATGTACGAGCCGACGCGGGT 98837 29 100.0 32 ............................. CCTCCAAAGAAGGGATCGCGTGAGCCAGAGAC 98898 29 100.0 32 ............................. GGGACGACGACACCCACGAGGTGATCGCCCCA 98959 29 100.0 32 ............................. GACCAGGTCTCGGCGGGCGGGGCGATCTCCTG 99020 29 100.0 32 ............................. GGGAGCGGGGTCTGGCAGTCGCCTCTGTCGGA 99081 29 100.0 32 ............................. GGGCTGCGGCCAGCCGCCCCGGCCGGATTCCC 99142 29 100.0 32 ............................. TCCGCGCGCATCATCTGCGAGTTCACCCCGGC 99203 29 100.0 32 ............................. CCGGGCCAGCCGCCGAGGGGCCAGTTCGAGCC 99264 29 100.0 33 ............................. AGCCACGCGGCCGTGGCCCACACTCCGTGGGCG 99326 29 100.0 32 ............................. CGTCCAGCGGAACCACGAGACGCGGGAAGCGG 99387 29 100.0 32 ............................. ATCGTGCGACGCTGGGAAGCCAGCTAAAAAAG 99448 29 100.0 32 ............................. GCACTTGCGGCAGAACCTCGGAGCCGTGCTCG 99509 29 100.0 32 ............................. CCCTGGGGTACCGGGTGCACCCCAGGGAATCG 99570 29 100.0 32 ............................. GCGGCCAGAGGAGCGGCAGCCGTCCCTTCGCC 99631 29 100.0 32 ............................. GACTGGACGACGAAGGCCGCCCCGCCCAAGAC 99692 29 100.0 32 ............................. AACTCCGGGGGTACCGGCACCGCTGAGGTGGA 99753 29 100.0 32 ............................. CCGTTGCCCCGGTTGCCGACTTCGGCCGTCTG 99814 29 100.0 32 ............................. ACCACGGCCGACGCGGTCGTACGTCGCGCAAT 99875 29 100.0 32 ............................. CGACACGAGTAGGAGCCATGGAACCCACCCTC 99936 29 100.0 32 ............................. CCGTTGCCCCGGTTGCCGACTTCGGCCGTCTG 99997 29 100.0 32 ............................. CTGGAGCGCATGCTCACGGCCGGTGCGTGGTC 100058 29 100.0 33 ............................. CCACGGGGCCGCTGATCTGTGAGCCGGGGATCT 100120 29 100.0 32 ............................. CCCAACGGCGTGCCGGGCCGGTTCCGCTCAAA 100181 29 100.0 32 ............................. CTGCCGCCCTCCGTCAGGCCAAAAAAAGATGG 100242 29 100.0 32 ............................. GGCACCCGCCCCCACCGGCACCACCAACACCG 100303 29 100.0 32 ............................. ACCATCGAGCGTTCCGTCCGTCACCTCGTGGA 100364 29 100.0 32 ............................. GCGCGGCGGCTTCGGGCCGGGCGCCGGCGCAT 100425 29 100.0 32 ............................. ACGTACCACGTCGTCATGGCGCACCAGGCGCC 100486 29 100.0 32 ............................. GAGGGCTTCAAGGGGCGCGGCTCCTGCCAAAG 100547 29 100.0 32 ............................. GGCAGATGAAGCGGTTGTTCGGCGAAGGCCGG 100608 29 89.7 28 .................C.........GA CCGGCGGAGACACTCCCGCCGTCACTGT 100665 29 86.2 0 .........C.G....G..A......... | ========== ====== ====== ====== ============================= ================================= ================== 58 29 99.5 32 CTGCTCCCCGCACGCGCGGGGATGGTCCC # Left flank : CCGCCGCCCGTCGTGTTGGCCGTCCGGGAGCGCCGAGCCGATGAGTGCCTTGACGTTGGCGGGCAACCACGTGTCCCACAGCAGCCCGGCGATCGCGGCGCTGTCCTCCATGTGCCGCCACAACGGCAGCCAGCCGTCGGAGTCCCGGTCATGCTTGGCCCACACGGTGCGGGCGGGACCGGTGAGTTTGGCGTTGAGCCCGGAGCGTGCGGGACCGGTGAGTCTGGCATGGAGCCCGGAGCGGGCGGCGCCTTGCCTTGCGGTGGTCATGGGAGATGCATACAGGGGGAGGGCGGGGCAGGATGGTCATACGATGAAACTCGTGCGAATGCTGGGGGAGTTGGAGAGGATGAGCCACGAGGAAGGCGGGTCGCCTATACAATGCCCCTTCGGCTTGCGCTACTTAGCCCATCAATGAGCACCTTGAGGTCGTTATGTCGGATTGCGCGAAAGTGGTCAGAAACCCCGGCCGCGCCGACTAAAGTCGCAGGTCGCGCAGT # Right flank : CAGCTCCGCCGACGCCGAGCTCACGGCCCGCGTCGGCTGTCCCGCCGCTCGACGGCCCGTTCCGCACGGCCAATGCACCACGGCCTACGGCCCCTTGCGGGTCTGATCCAGCCCTGGCCACTGCCGACCCCAGGGCATGGGCCAGGTGGTCAGTGGGCCGGGGCGTTCTGCGTCTTCTGGAGGGTGTGGGATCAGTCGGGGTGGGATGTGCGCGACCCGGGCCCTGCGTGCCTCGCGGTACACCGTAAGACGCTCTTCTGGCCGTGGACCTCGTCCGGGGTGAGGCCACCGCTGCGGACCATGCCTCGACGTGCCCGCCTGCCTGATTTCGGCCGGCGGGCACGCCTGTGCCGACTCGCGGGGGCACGTCCGAAGTCAGGCAGCAGCCCCGGGGCCACCTTCGCGTACCCCGGTCACGAAAGCGGCCCATGTGTCGGCGCCGAAGATCAGGACCGGGCCGCTTGCGGATTTGCTGTCCCGCACGGGAACGGCGCCCGCAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //