Array 1 2682392-2681474 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024955.1 Kyrpidia spormannii strain EA-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 2682391 37 100.0 37 ..................................... ACAACCGAAACCCGATCCCCTCCCGTATCTTTGGAAG 2682317 37 100.0 36 ..................................... AGACAGTAAGCGTCCACGGAGCCCATGATGTCGGAA 2682244 37 100.0 37 ..................................... ATCGGTGCACTTCATCCCGCGCCGGTCCCGGCGGCAG 2682170 37 100.0 39 ..................................... AGTCGCCGCAAGATCTCCTCGTCCTCCAACTGTCCAACT 2682094 37 100.0 36 ..................................... GGAGTAACCAAGGCTTTCGCGGAACTCACGACTGGA 2682021 37 100.0 35 ..................................... TGCGGTTGCGTCGCAGGTGAATGCGTGATGGCACC 2681949 37 100.0 37 ..................................... AAACTTTGTCCGTCGCATCTGGTGGCCGGCTAAAAAT 2681875 37 97.3 35 ............A........................ TGTAAATTCCACGATTGCTAAGAAGAAGATAGAGT 2681803 37 100.0 36 ..................................... GATGCCGTGGCTTGGCCAGGGGACGGAACGGATCGA 2681730 37 100.0 36 ..................................... TGGAGGAATCTGGCAGGCCATGCCGCCGGGACCGGC 2681657 37 100.0 36 ..................................... CATGAACTAGCCAGCGTGTTTCTGCCTGTTCGGCAA 2681584 37 100.0 37 ..................................... GCGAAATACGCCTCTCGAATGAGTTGTGTCGGTGTTT 2681510 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 13 37 99.8 36 GTAGCATCGACGTAGACCCGTGGTTGGGGATTGAAAC # Left flank : TGGACGGCACCGTCGAGCATTCGGTCGCTGAAAAGGATTTCTTAGCCACTCCAACCACGGTGTAACGTACACGTCCAATGTCTCGCCCCCCGCCTTTCTTTGACATCCCACTTCTTTCATTCGACTGGAAGGATGGTTTTTCCTTCCCGGTGGTGTCGTTTTTTTGTTGTTTTTGTGGAAGATTGGGTGTGGCGGCTCGGGATGGGCAAGGTGGTCGCGAAGGGCTGCCCCGGATGTTTATCGAAGCGCGTGATGAACGGATCTACAAACGTGGAGACGGAGGAGTCTGAAAAAGGCGTTGGCAGGTCTTCGAATCTGTGGTATTCTGACGCCAGAACGTTGACCGTCGAGAATCCAGGGGGTGGCTCCCATGCTCGTCACCGCCCCGTTTCGAGGATCGGCCAGGTTTTTCAGCAGAATGTCGATCCTCGAAAATCCAGCGTGTCGGCTTGACGGGCAAAGCGCATATCCACGCCGATTTTTCCGTTCATTCGACAACG # Right flank : CACAGCGACCAGACGCCCTGGTACATCCACGTGCCAGTTGGAGAACTTGTTGCAGATGCTGCCTTCCTCGCACAAGAAACGGCCGGTCATTGAACGCGAGTTGCGCATGCTGTTAAGCGGCCGGACCGGGGAGAAGAACGTGGCGTACCAACTGGAATTTGGTACAAGGACGCGGCGGACGTCGTCGTGGCGAACGATCTGCGAGTCGAGTACAATGGGCGATCGGTGCAGATTGACCATTTCGTTGCGCTGCCGGCGGGGTTTTTGGTCATCGAGAGCAAGTCATTGCCGGACCATATTTATATTGACGAAGCCGACAATTGGTTTCGGATGGCGCGAGGGAAGCGCGGGGTTGAGGACCGGGAGGGCATGTCGAATCCGATCGAGCAAAATAAACGCCACATTGCCGTCTTGCAGGAACTGTTCGGCTCTGTTGCTCACGGGGGTGTTCCACCCCTTGCCAATGTGATCGTGTTCCCGCATCCGAAAGTGGTGGTCCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCATCGACGTAGACCCGTGGTTGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : NA // Array 2 2694389-2693614 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024955.1 Kyrpidia spormannii strain EA-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 2694388 37 100.0 34 ..................................... CTGTATTGGACGAGCTAGGAAACCCTGAGCCTCC 2694317 37 100.0 36 ..................................... ATCAGATCGCCGACCAGTTCGAGGCGTCCTCCACTC 2694244 37 100.0 38 ..................................... ACCCGTAACAGGATAGGCAGAGAGACATGGCGATAGTA 2694169 37 100.0 37 ..................................... AGTAGAAAACCTTAATGCCAGTCCTCCGCTGGCCCTT 2694095 37 100.0 39 ..................................... GGAAAACGAGGTTGCCTGGCACGCCGGACCGACGGCGAA 2694019 37 100.0 38 ..................................... CATCACACCAGTAGCAAGGGTGATAAGAATCTTGACAG 2693944 37 100.0 36 ..................................... GAACAAACGGGCGCAAAATAGCAATAGCCTCGTCGT 2693871 37 100.0 39 ..................................... TTCGTCCTTGGCTGGCCAGACGCTATGATTCCATGCGTC 2693795 37 100.0 35 ..................................... CCTTCCACGCCATCCGGAGGGCCAGAGCCATCCGA 2693723 37 100.0 36 ..................................... AGTTGTGCGTCGTTTGCCAGCCTCGCCGCTTCTGGC 2693650 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ======================================= ================== 11 37 99.8 37 GTTGCAGTCGCAAAGACCCGAGGTAGGGGATTGAAAC # Left flank : GGCTCGTATAAACTTCGGAGATGCAGGAGACTCGGCACGGAACGGGAGGGTGGTCCCGCTCTGGAAGTCGGGAACCGGGGTGTCACCGGGCGTCGGGTCACCACGTCCGCGGAGGGCAGGAAGTTGGAATGAGAGGTTGTCTTCCGGTACGGTCACGGGTACACTGAGAATAGACCCGTTGCCGTGCCGGATCTGTGGAGAGCTTGGGATCACCCGGGTGGCGAAACCCGGCATCTTGAAGAATGGTGAGACTGGTGAAGAACAACAGGGATAGGGGATTGAAAGTATTTGGTTTTGTAATTGATGCTCACGTGGAGACCCGTTGGTAGGGGATAGGTGCCGTGCCTTGCTGGAGGCGGAAAAGCCGATTGTCGACTACGGCACCGGACTTTCGAGGATTGCCCGGGTTTTTGTGCAAAATGGTGATCCTCGACACAGCGCAAAAAATCTGTGGAGATGGGCCCTTGTCCCACAAAGGTTTTCGTGCTCTTTCGACAACG # Right flank : GGGAGGACATCGTGGTGAAAGAGATTGGGTTTGATGTGTTAAAGGGTTTGGCGTTTGGGCGGTATCGATTTTGGGTTCGGGCTGGGGAGGGGGGCATGGCTCTGCGGGAGTTTGCCGAAGCCACGCTTCGAGGCGGCTTCGGCACGGTGTTCCGCGAGCAACAATGTGTCGCTTTGGGATTTGGAGAGGGCTTATGCCGCTCCGGGTGCCGTTATTCGGATGCTTGTCCGGTGGCGGCTGTATTCGCACCGGGAGGTGGAGGTGAAGAGCTGGATTGGCAATCCGAGCCGAGTGATGCGGGCGATGACGCCTCGGCAGGCGCCGCGGAGCCGACGCGGCGTTCATCTCGCCATCCCAGGGATTTCGTTGCCCCTTACATTCTGTACATGCCGAAGCGCGGCAGTGTTCATTGGCGGCCGGGTGAACATTTCTCCTTTGATCTCACTTTGGTGGGAAGAGCCATGGGATATTTGCAGCATTTTATCGAAGCGTTTCAGGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGTCGCAAAGACCCGAGGTAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : NA // Array 3 2702085-2701245 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024955.1 Kyrpidia spormannii strain EA-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 2702084 37 100.0 37 ..................................... ACACTTTCCATGGGCCCGGTGTGTGGCTCATGCTCTC 2702010 37 100.0 36 ..................................... TCGATGGACTGTCCCTCATGTTTCGGCCCGCCTTTT 2701937 37 100.0 36 ..................................... CAGCCGTCCGGCGTTGGCGGCCCAGCGGGTCTCCGT 2701864 37 100.0 36 ..................................... GCCGCCTCCAGACTACCGATTGCGCGTCATCCCGAT 2701791 37 100.0 36 ..................................... GTAATTCGGCCTCTGAAGCAGAGCCGGAGATATTTA 2701718 37 100.0 35 ..................................... TTGATAGGCTTGCGATGCCAGGCCGGACAGTGCGC 2701646 37 100.0 40 ..................................... TGGCCATCGTACAGCACCGCGGTGTCCCCATTGTTGTTCC 2701569 37 100.0 36 ..................................... GTGAGGCGTTTTTGATTCTCTTTAGGGGACAAAGAT 2701496 37 89.2 34 ...C..C.A..G......................... CGATGGGCATCCAACTGCTCCAGCCGCCGTTGTC 2701425 37 89.2 35 ...C..C.A..G......................... CCCGCGACAGGGCCTGGAGCTGGCTCGCGCACCTC 2701353 37 86.5 36 ...C..C.A..GG........................ ATCACCTGCATACTCGCCTTCGCCGCCGGTCCAGGC 2701280 36 86.5 0 ...C.........................-.G.GG.. | ========== ====== ====== ====== ===================================== ======================================== ================== 12 37 96.0 36 GTTGCATCGACCAAGACCCGTGGTTGGGGATTGAAAC # Left flank : CCACCGTCAATAAACCAAAAACTGTCGACGAGATAGAGTCTTCCGAAGTCTCAGCTACCGACCTCAGGCGCGAGGGTCGCGACGGGAAAGCGGGAGCGAAGAAAAAGGACAAGGCCCCTTCGTCAGTGGATTCTCCTGCCGAGACGGCCTGAGGTCCAACTCGTTACCAGTTGGTGTTCAGTTGAGGCCGCGCAGGTTCAGGGACTTGATCACTTTCCGGCCGGTTGTTTGCTGCGACCTTTCTGATGACTTTCCGGCGGGGTGGCGAAACATTGAGATGCGGCGACCCGAAAGGACGTTGGCAGGTCCGCAGATCTGTGGTATCCTGACGCCAGAACCTTGACATTCGCGAATCCTGCGGCGTCCACCACCACTCGGTGTCGACCGGTTTCGAGGATCGGCGGGGTTTTTGAGCAGACTGTCGATCCTCGAAAATCCGGCACATCCGCTCGACCCGCAAAGCGTGCAACCACGCCGATTTTTCCGCGCTTTCGACAACG # Right flank : GTAAGACTGCTGATCTGTTGGCCGCTTTTGGGTCGGTTTGACCGTCTCCGGGACCATACACTCTAGAGATAGTCAATGGATGGGGAATTTCCGGATACATTCCCGGCACCCGCGATGGTGGGTCGCGTTTTTTTAAGCACTAACATCTGTTTGCTGTCATGTATGTTGTCAGTATGTTTGTGTTAATCTTCGTGTAGAAGTGAGCGGTTCTATCCGTGATGGATCGCTAACAGGATGCTGGGACGGATCGTCCACACAGGGGTGAAAATAGATGTTGGAAGAGGACCTTCTGCGTGAATGGGTCGGGGAACAGGCGGCGCTGTATCCTTATCAGAAAAAAGTGTGCCAGGTGTTGCGAGCCGGCAAACACGCGGTGGTGCATGCGCCTACCGGGGCGGGGAAGACGTGGGCCGTGTTGTTGCCCTTCGTGGCCGCCCATCGGCAGGGGAAGCGTTTCGCCGACCGTGTGCTCTATGCGCTCCCGATGCGGACGCTGGCCT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:0, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCATCGACCAAGACCCGTGGTTGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : NA // Array 4 2709141-2707329 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024955.1 Kyrpidia spormannii strain EA-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 2709140 30 100.0 40 .............................. ACCCGAAGGTAGGGCCCGGAAAGATGACGGACGATTGACA 2709070 30 100.0 39 .............................. CTCGATCCGATCGTTGCGAGCTAATAGGGAGGGATGAGG 2709001 30 100.0 40 .............................. TCGGGCGAAATGTCGCCGATGCCGTGGATCCGCCCAGGCC 2708931 30 100.0 39 .............................. CCGCACCATGACGTACCGGCAGATCGGCGCATCCATCGG 2708862 30 100.0 37 .............................. TCATCGCCCTCTCCCAGATCGTCAGGGGCGTGGAAGG 2708795 30 100.0 39 .............................. CTATTGTCCACTACGCTTCATATCGTAGTGGACAATATG 2708726 30 100.0 37 .............................. GCGGTAATTGATCACGGCGTCGACAATGAAAAGGGCG 2708659 30 100.0 39 .............................. AAACATTTGCGACAGCCCCTGCATCATCGTTTGGGTCTG 2708590 30 100.0 40 .............................. AACGAGATCGGCTGGCCTCCCGTTGGCAAGATTGCGTCGC 2708520 30 100.0 39 .............................. CCACGGTATGACACGCGGACAAATCGCGAAACGCCTCGG 2708451 30 100.0 37 .............................. CAGTGGGTTGTCGAGGCGATGAAAGAGGCCGTCAGGC 2708384 30 100.0 40 .............................. CCCGCCACCCGCCGTCCGGAAATCCCCGAAACCGAGTCGC 2708314 30 100.0 39 .............................. CGACATCCCACTTACAAGGCGAAGACTCTCCGTGAGCTA 2708245 30 100.0 39 .............................. GGAGTTTCTCATCAGGCGGAACAGTCTTCCTATTGGTCA 2708176 30 100.0 38 .............................. GGTTCCCACCCGGTATCCGCGAATATCGCCAACTCCGG 2708108 30 100.0 39 .............................. TCCCTTCTGCGGACATGTGGACATCAGCCGAAACTGGAA 2708039 30 96.7 38 ...........T.................. ATAGCCGGGAAAGCCAACGTCGAAAACGCAAGCCCCCG 2707971 30 100.0 38 .............................. AGGCTGTTCGGGATCATCCCGGCCTGGAGTACGACCGG 2707903 30 100.0 39 .............................. TCGATTAGCCCGGTCGCCGTTGAGAGCTCGGCCTTTGCC 2707834 30 100.0 39 .............................. AATCTCCGTCTTGCGCGAAATCTAACGCCCACCACCACA 2707765 30 100.0 36 .............................. TTCAATTTTTGAATCTTTTTCGCCAACCGATAGACC 2707699 30 100.0 38 .............................. CCATTTCATGTCATCCACCTACCTTTTTCCATTTTTCG 2707631 30 100.0 39 .............................. TCTGAACTTGCATGGGCCATGAATCACTGCTCGGAACGA 2707562 30 100.0 39 .............................. ACGAAGCCTCTCTGGCGACGTCACACAATCGCACCAATA 2707493 30 100.0 39 .............................. GACATGCTCATGAAACGGTTTGGCGAGAAAATTCAGGAC 2707424 30 100.0 36 .............................. CATCGAGGGACCGGCGAGATGATGTACCCGTCCACG 2707358 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 27 30 99.9 39 GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Left flank : GGGAAGTCACTTTACCAGCCCGAAGTACACGGACGTGCTGCTAAATCATGGGATTCAGATCAGCATGGACGGTCGGGGTCGAGCCCTCGACAATATCTTCACCGAGCGCCTGTGGCGGAGTCTCAAGCAGGAAGAGGTGTATCTTCACGACTACCAAACGCCGAAACAGGCTCGGGAAGGGATCGCCAGATACCTGGAGTTCTACAACCACAGGCGTCCGCACCAGTCCCTGGGATACGTGACGCCGGCCTCTGTGCACGGGCTCTAGAGGGGGCCCCTCCACCGAGGGGGGCCTCCTGCAGGAGTGGGCACGAAAGACTAGGGGGTGCCCCTCCACCAGAATGATCGAGGGATGATCCAGAAATGGAAAACAGGCCCGGCGTCCATATCCAAATTCAGGAATCCCGACACACTTTAAAAAGGGCCAAAAAAATGTCTTGATAATGGGGTCCACCTCAGGAAACCAGGAGTGCCTCCCTCGTAAAGCGCATTATCCCCGC # Right flank : TTTCCGGATGGATCTATGCCTATGTGCGCTGAGTGTTGATATACACTGAAAATGGACCCCAGATCGTCAGTGAAAATTGACCCCCACCAGATAGACTGGTACGCTCCTACTAATCTGTGTGGGAGCGGAGGAAAAAGGATCTCGTTCGCCGCATCCGTTAACGACTCGTGCCTATCTCCGCGATTGCCTGGTGTTCCAAAATCGCAACAAATGCTCCTTGACGACCGGCATGTGCTCCCGGAGCCACGTCTCAAAATACGCCGGAGAATGGGTATCGCCGCAGTGGCTGAGGTCGTTGCGCAATTTGCGCACTTCATCGAAATCATTGAGGAGACCCGTGTGGCGTGACAACGTAAATACCAAATCCCGGTCTCGGGGATACGTCATGTTCTCCAGCGGTTTTCGATTGCGGGGGTTCGCTGCGAACTTTTGCGCGACGGTGACCAATTCTTCGATGCGATCCCGTTCTTCTTTACCCTGCACCGGCAAGCCAAATGCCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTGTAGGGTGCCTATGAGGAATCGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.24 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 2713366-2710537 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024955.1 Kyrpidia spormannii strain EA-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 2713365 30 100.0 39 .............................. GTGTGGGCTCGCTCTTCTTTTCCGGCACTCTCTCACTGA 2713296 30 100.0 37 .............................. TCGGGGAGTGGGTGAGTGGTCATGCCTTGGATTCCGG 2713229 30 100.0 37 .............................. AGACCGTTTCACCGTCCGCCGCAGATCCCGAGGAATG 2713162 30 100.0 39 .............................. CCAGGTAAACGGAAAATGGATTGTCGAAGTGTCTGGCGG 2713093 30 100.0 40 .............................. CCCGGCTGGCACGAGGGCAATCGAAAACCTATATCACGAA 2713023 30 100.0 38 .............................. CTTTTTCTCTTCCGACACCCTAGCGACGGTGCCGGATG 2712955 30 100.0 39 .............................. AATACAATCGCAATCTTCTTCAGCATAAGTGCTGGAGGA 2712886 30 100.0 40 .............................. CTCGGGATGTCCGCCTCCGCCTCCTCTAGAGTGGTGTAGA 2712816 30 100.0 37 .............................. ACCATCCCCTCACGGCGCAATTGGTTTCCAGCACGAA 2712749 30 100.0 39 .............................. AGTACCTTCAGGTAGGTATTTCCAGTATTCACAAACCCG 2712680 30 100.0 36 .............................. AGATCAGCAATACCAGAATGATGATAGTAGTCGCGT 2712614 30 100.0 36 .............................. CGGCCCCGAAAAAGAGCAGGAAAATGATGAACCATT 2712548 30 100.0 37 .............................. ACAGACATCCATTTGGCATTGAGTACAAAGAAAATGG 2712481 30 100.0 40 .............................. CCTTCCGATAGTCCTCCTTTCAAACGAGATTTTATTATCC 2712411 30 100.0 38 .............................. ACGGTATGAACGTTTTGCTAACGAAACTGGCCAGCATG 2712343 30 100.0 38 .............................. CTCCCATCCTTCTTTCACCCAGAGCAGATCAATTCCGA 2712275 30 100.0 39 .............................. CGACATCCCACTTACAAGGCGAAGACTCTCCGTGAGCTA 2712206 30 100.0 39 .............................. TTTGGCGACAGCGGAACTCCTGGGCTCTGTGTCGAAAAC 2712137 30 100.0 38 .............................. ATGAATGCACTTTACGGGAAACTGATCGAAATCCGAAT 2712069 30 100.0 36 .............................. TCCGCCCACCACGCACGGCAATAAAGAGCATCCGAA 2712003 30 100.0 36 .............................. TTCACCCGAATGCAACCCGTAGTAGCACGGCCCGTA 2711937 30 100.0 38 .............................. TCCGAATACTACGGGAAGTCGGCGGACGGAAGCCCGCC 2711869 30 100.0 37 .............................. TTCATACCGTTGCCGGGACCCCGAAAAGGCACGGCGG 2711802 30 100.0 37 .............................. TTCTGATCGATCCACTGTATCCCGCATGGAACTATGA 2711735 30 100.0 35 .............................. CGATAGGATCCGATATGTGCCAAAAGAGGAATTTT 2711670 30 100.0 43 .............................. TAAGTCGGTTGAGCCTGCACCTGGGTCTGTGTCGTGTCCACCG 2711597 30 100.0 40 .............................. CCGACCGCACCCGCCGCGATGCTCTCTCCGGCCGTTGTGG 2711527 30 100.0 37 .............................. ACTCTCGGCGGCTCGGCCAACGTGCACATGTTGTCCT 2711460 30 100.0 39 .............................. CTTGCATCATATTGTTAAAATACTTTATTAATTTGTGTT 2711391 30 100.0 43 .............................. ATGGGAGAACCGGAAACCGGAAACGATCAGACAGTTCTACGTC 2711318 30 100.0 40 .............................. GCAACATCTGACGAAAACAGAACGATTGCTTATGTTGTAT 2711248 30 100.0 42 .............................. CCGAGTACCTTTTCGAGTTGGGCTACGGATAGCGGTTTGCGC 2711176 30 100.0 38 .............................. TAACATGAGTGAGAAATACAACGGCTGGAACAGCTACG 2711108 30 100.0 40 .............................. CGGAGCCGCACTCACCGCCGCCGGAGCCGGTTCGCTTTGG 2711038 30 100.0 36 .............................. TCTGGTGACCCGTGGACGCGCCACAAACGCGGCCCG 2710972 30 100.0 39 .............................. AACGCGCAACATCGAGGTATGGATACTTCCGCCTCATGC 2710903 30 100.0 38 .............................. CCCGGCCACACTTTCCACCATCGCCCGCAGTCCCCCGT 2710835 30 100.0 37 .............................. GTATAGCTTTGATCCGAAGAGAGGGAAAAAATTCTCC 2710768 30 100.0 36 .............................. CTCCTCCTCGTTTTCGGCCTGCCTCATCAGCGCCGG 2710702 30 100.0 37 .............................. CTGTCATGAGCTTAAAAAACAACATAAAAGTGTATAT 2710635 30 100.0 39 .............................. CGTGGTACGAATATCGTGTCCTGCGAGAGGATGTTGATG 2710566 30 93.3 0 ...........................T.T | ========== ====== ====== ====== ============================== =========================================== ================== 42 30 99.8 38 GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Left flank : TTGGATCCTGAAAAGCCTGGTAGGTCTCCAGCGGGATTTCATGACCGTCGACGCTGCGTACCCGAACTTTTTCCACAGCCACCTTCCGGCCCCCAAGCATCACGGAGCCCTTTTCCTTTCCGTGTCGCACAGCCTTGCGCTTTGGATTGTGTTTCCCTTTGGGGCCCACCAAAGCTTCGACTTCCTCTCGCATCATGAGTTGAATCACTCGAAGCCCGGTTTGAACCGCCAAGGCCATGAGTCCCTCTTTCGCGCTCTCCATCACGTCCAGTAGCGACAGTTGGAGGGTGAACTGCTGAAAAGGATCTAGTGTCGAAAACAGGCTCTGGTCATTTCTCACAATTTGATGTACCCTTGATTTCATAGGTGGCGTTCTCCTTTCTTGTTGTGCCCAATCCCGTTATACCAAACGGGTTCAGGAGACCGCCACCTTCAAATTTCCACGAAACCTGGGACAACGCCCAAATGATGGATGGGCGGGGGTACATGGCCGGACTCAA # Right flank : AATGGACCCAAGAAACTGGACAACAAGAAGGGAGATTTTAAAGTAGGCCCATGCCGAGAAAAAAGTATGATACTGACTTCAAAACCAAAGTTGTCCTGGAAATTCTCAAAGAGGAAAAGACGTTATCTCAGTTGGCATCCGAGTACGGTGTTCACGTCAATCAACTCCGCCAGTGGCGGGATCTCGCCTTGGAAAACTGGCCACGAGCGTTTGAACCTGAGAATAAACAGCTGGCCAAAATTCGTTCAGAATATGAAGACAAGATCCAAGAATTGTATGCGGAGGTCGGTCGCCTGAGCACACAATTGTCTTGGTTGGAAAAAAAATCTCGCCTCGCTCAGTCGAGAGGACAGGCTGGCTCTCATCGACTTCCAAGAACGTGAACTCCCGCTCTCCGTTCAGGCCAAGCTTCTGGGCTTGAACCGTTCCAGCCTGTACTACAAGCCGGTCGGACCATCCGAGGAGGAGGTGAGGCTCAAACACCGGATTGACCAAATCTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTGTAGGGTGCCTATGAGGAATCGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 6 2715230-2714860 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024955.1 Kyrpidia spormannii strain EA-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 2715229 30 100.0 36 .............................. TCAGGACCCCGGGATCAGGATGACTGGAACGCCGGC 2715163 30 100.0 41 .............................. GAGACCCGCAGTTTTCCTCGGAGATTACATCTTGCGTGGTG 2715092 30 100.0 38 .............................. AGCCAGGTTCGTCGGGAGGTGGAAAATCGGCAAAACAA 2715024 30 100.0 40 .............................. GCTCACTATCGCATGTCGGTACACTCAACTTCCGAGGTTC 2714954 30 100.0 35 .............................. CACGACGAACGTGCCGAAGATTTGCTCGACGACAT 2714889 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 6 30 100.0 38 GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Left flank : TGTCCCCGGGGGCGAGCCGGGGGCGGCGGTAGTCCCCTTGGGCGGCGGTTCCCGGGGTGGCGAACGTATAATTGTAGTCCATGAGAGACGGACAACATGATGCGGGAATATTGGAGACATGTTGCCGACATATGGGCGGGATAGGAAGGGGAATTGTGTGAGATGTGGCTACAATTGCGAAAACGGAGAGGGATGGAATTGTGTGGGATGCTGATACAATTGTGAATATAGGGGGATAGGACTATGGGCCTATGGGGTTAATTGTGTGAAAATTATATGGCTATTTTTTGGATAGGGTGAGATGGGAGGGCATGGATGGGGTGGCATGGAAATGGGTGGAAGGTGGTGGGATGGGGTGAGATGGGAGAAGGTGGAAGCTGTGGGGATGGGTGGACACATGCAAGAATTGTGCCAATCCATATTTTGGTGGGTGACTCTGATCGCCTCCCCTTTACGCTAGCCCCCTGTGCAACGGCGCCGTGTACGACGAGGACAAGCGG # Right flank : AAATGATGAGGTTGTCCCGGTCGTCGTGGATTTTCGTGACGGCCTTTTTCTTCAATTTACGCGGTGATGGATTTGTTTTCCTGCTGTGGTTGCGGATGTACACATTTGTGTAATGCATCAAGAAGCAGAGGGATTTGGCGAAATCCCTTGACGGTCCTGAACTTTTTCTCCGCCTCCAAAAATCCTGCAGCCGCCCAGCGCAGCACCTGTTCCCCATTCTGCCAGCGCTTGACGTTCCGACTCACCATCCGCACCTTCTCATTGGCTGATTCGATCGCATTCGTCGAGCGCAGAGTTCCCCGAAGCAGTTCCGGAACTCCCAGCCGGATCACGGTCACGGTCTCTTCCATCCCCTCGCGCAAACTGGCTGCTGCTCCTGGATGCGACTTCTCAAGTTGTGCCGCCAAGCGCCGCAGGGCCGCCAGTGCCTCTTTTTCGGTTTCCTGGCGCCAGGCCTCCCGCAATTGCCTCTTGACCCAATCTCGCTGTTTCTCCGGCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTGTAGGGTGCCTATGAGGAATCGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.24 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 7 2739036-2729499 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024955.1 Kyrpidia spormannii strain EA-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 2739035 30 83.3 40 A.CAAC........................ CCGACGCGAACGCGGCTCCAGCATCTGTCACGCTGGCGGA 2738965 30 100.0 37 .............................. TTTCATCTCGGTCTTTGTCCACCGCCGCGTCACGTCA 2738898 30 100.0 39 .............................. TATTCTTGGTCCGGTTCTGAGAATTTTCCCTTGTACAGC 2738829 30 100.0 37 .............................. CCCGCATCCTCTCGTTCTTCTCCGCCCATGTGTCAGT 2738762 30 100.0 39 .............................. AAAAGATGGTCGCAGATTCGTGGGATAACATCAAACAGG 2738693 30 100.0 40 .............................. TAACGGTCCCGCTGGTTTCCCACTTCGCGCTATCTATGCT 2738623 30 100.0 40 .............................. ATTCACCCCTAGCCAGCCGGGCCACGGCAACCCTCGTGGT 2738553 30 100.0 36 .............................. CAGGTTCAGAGCTCTCACGCACATCATGATCGAGTG 2738487 30 100.0 40 .............................. CACCCAAGTATCCCCGTGATGAGCTTCTGGCAAATGCCGA 2738417 30 100.0 37 .............................. GTATACCACGTATGCACATAGAAGTCAAGTACCTTTT 2738350 30 100.0 37 .............................. TTCGGATGCCAGGACCCACGAGCGAGGTCCAGATACC 2738283 30 100.0 39 .............................. GACTGAGAAATTTCTGCTGGCAGTGGGCACCCTGCACAT 2738214 30 100.0 37 .............................. CGCCGGACTGGTCACAGTCCGAACGCTCCTACACTCT 2738147 30 100.0 34 .............................. AGGTTGTATGATGACGATATGTACTGCCGGGAGC 2738083 30 100.0 40 .............................. ACAAAATTTCCGTTTGTATCATGATATATTGCCCATCCCC 2738013 30 100.0 39 .............................. TGAGACACCAGGTAGCCATACAATTGCGGATCGTTCGGA 2737944 30 100.0 39 .............................. TCTGAATGCGCACCCTCGGTCCTGTCGGGCGGGCGTGGA 2737875 30 100.0 38 .............................. TGCCGTGTCTACGGTAAGTGTCGACGGCACTCCGCCGC 2737807 30 100.0 37 .............................. TATGTCAACACACAAGCCAGCGCGGGCGATGTCGACA 2737740 30 100.0 38 .............................. CCAATAAATCGACGATAGGACCGATAAAACCGGGATGG 2737672 30 100.0 40 .............................. TAGACGAGGTTAGTTTCGGTCATACCGTTCACGTGCTACT 2737602 30 100.0 36 .............................. AAGGGGGAGATGCAGAGCCTGGACCGGAGGAGCCCA 2737536 30 100.0 39 .............................. CTTGGTCTTTTGCCCATGCAGAATAATTCGGTTTACGCC 2737467 30 100.0 38 .............................. TGCGGAGAGCTGGGCAGAAAAAAAGCGCGTTCGGATAC 2737399 30 100.0 37 .............................. CCTAAGGCTATGGTTGAATGGCTTCGCCGTCGAGGGA 2737332 30 100.0 41 .............................. CGATCTTTCTTGGGTACAAGATTTTCAAGCGGTTTACGGGT 2737261 30 100.0 36 .............................. ACACCTGATTCGGTGGATGCGTTGGCGTCGGCGATT 2737195 30 100.0 40 .............................. TCGAGGCAAAAAGGCTGCGACTTTCAAGGAAGCCTACATC 2737125 30 100.0 38 .............................. GCAATATCTTTCACTTTCCGGCGCCTCCCTTCAGTTGG 2737057 30 100.0 36 .............................. CAGACGCATTGATAATATCACTGGCCTGCTTCCCGC 2736991 30 100.0 38 .............................. GAACTCTATGTATCCGGGAAAATTTTCCTAAACAACAC 2736923 30 100.0 35 .............................. CAGTTAGTCATGACGAACCCAACCGGATCTGCCCC 2736858 30 100.0 35 .............................. ATCACGAGTGTCTGGATCAGAAGCCGGATCGCGCT 2736793 30 100.0 39 .............................. TCGTTCAGCACTGGCAGCAAATCACCGGGTTCCTGGGCC 2736724 30 100.0 40 .............................. CTGATGTCGATGACACGCCTGGGCTGCACGAGGTCCTTCC 2736654 30 100.0 35 .............................. TACAGCCACTCGAATGCCTGCACCACGCCGTTCGC 2736589 30 100.0 35 .............................. AGCAAGTGATCGAGTTCTGTGCGGAGACATACGGG 2736524 30 100.0 36 .............................. ATCGGCATCCCGCTTCTTATCGTTCAGCACTGGCAG 2736458 30 100.0 37 .............................. ACCGGGGGCGGGTGTTCAGGTACGGGAAAGACATCAT 2736391 30 100.0 39 .............................. CGCGCTCGGCGTTCGAGCTGTCGGTCACTGTCAGCCCCG 2736322 30 100.0 39 .............................. CATCAGAGAACGACGAACTGCGCGGATGGGTGTGGATAT 2736253 30 100.0 39 .............................. CCTCGTCATCACGCACTGGCAGGGGATCAAAGAATTTTT 2736184 30 100.0 38 .............................. TGTGAACACTCAGAAAATAGTTTGCCTTCGCCTGATTG 2736116 30 100.0 39 .............................. ACCTGTTTCACGGTGGCGCTTTCGTGAGCCAAAAACCGA 2736047 30 100.0 35 .............................. ATCCAGAGGCCGGCGAGGATGAGCGCCGCCGCGTG 2735982 30 100.0 39 .............................. AAAAACCAGGGAACCACGCCAATCAATGGCTTTTTCCTG 2735913 30 100.0 35 .............................. TCCGACCTTACATCCTCGACGCGCACGATCTGGAA 2735848 30 100.0 37 .............................. GCTTGTCAAAGTGACCGGGACCTCGGAGATCCAGTGG 2735781 30 100.0 35 .............................. GTCAGAACAGCGTGAACTTCTACTACGAGCCGGTC 2735716 30 100.0 39 .............................. TTCTCGAGGCCTTGCACCAGGCGGTTGCGCAGGGACGTC 2735647 30 100.0 40 .............................. CTGCACTTGGCGTGCGAGTACCCGACTGTTCAGCTCACGC 2735577 30 96.7 40 .................A............ CCATAGGCGTAGGGATCGGCGGCCACAAACTCCAGCGTGG 2735507 30 100.0 37 .............................. CAAGTGCCATCATGTGACCCCGTCGCAAGGTCCCCGG 2735440 30 96.7 35 ..........A................... CGGATTGTGCTAATCTCAAATCTACCTGACCAGAC 2735375 30 100.0 40 .............................. TAATTCAAAATTGTCCCTCCCGCGGGCGGCTGTGGTACAG 2735305 30 100.0 40 .............................. CCAAATAGAGCAGTCCGCCTCCGACCAGTGCCAAGATCAC 2735235 30 100.0 40 .............................. GGAAAGAAGAGGAAATGTTAAAACGCATTATTTTCGACGT 2735165 30 100.0 39 .............................. AAGCATTTTCTTGGGGAGGTGGTGCCCGAAGAGTTTTCG 2735096 30 100.0 40 .............................. ACGGGACGGACATCCCTGGCACAACAACGTATTCGCAGAC 2735026 30 100.0 37 .............................. ACTGCCGACAATCCGCAGTATGAGCCGGTGTTCATTC 2734959 30 100.0 40 .............................. CTGTCCCAGATGCCCTGGTTGTCGTGCAGGCTGGCCTCGA 2734889 30 100.0 38 .............................. ACCACGAATCGGCGGCCTACGTCGTGGAAGGAAACCTC 2734821 30 100.0 39 .............................. ATGGCACCGAACCACAGGAAGAGGACAAAGAGGCCGGAA 2734752 30 100.0 38 .............................. TCTCCGCGTGCGCGGCGACTGCATGGCGGGCGGGCGTA 2734684 30 100.0 38 .............................. AAACGTTAGCTCGGTTTTCTGCATACATGGGTGCTGAA 2734616 30 100.0 35 .............................. CATGCTCTAACCAGCCCCGCCGAATACAGGCAACA 2734551 30 100.0 35 .............................. TCCGGTATGCGGTTTCCACTGGACCATCGCATATC 2734486 30 100.0 39 .............................. TCGGAATATTCAACAGATTGTTGTTTCCATCCCGAAGTG 2734417 30 100.0 38 .............................. CGCCGATGTGACGCTTGTGACGCCCGCTTTCCTGGGTT 2734349 30 100.0 37 .............................. CGGCCGGGGAAAGGGCGAGCAGTCCGGAGATGGGTAC 2734282 30 100.0 38 .............................. AAAAGCAGGGCGGGGCGCAGGACGTGGCCTCTGCGAAG 2734214 30 100.0 37 .............................. CACTCGCTGTCTGCACTTGCGGCGCGGGTTCTATGGG 2734147 30 100.0 39 .............................. TAGATGTCGAACAGCGTCGCGCCGGTCAGGTGCCCAGGA 2734078 30 100.0 37 .............................. ACCACGGCCTGCGTTTCATACTCGAGCAAGTTCACGC 2734011 30 100.0 39 .............................. CCACGAAGGGAGAGAGGGAAGCAAATGGAAATCACGATT 2733942 30 100.0 37 .............................. TCGCCACTGCCAACTGGGGGACGATCACGCATATCGG 2733875 30 100.0 39 .............................. AAAGCGCCCTGAAGTTTCACTTCGACCGTCTCCCCGGGT 2733806 30 100.0 37 .............................. CGCTCTGGTTCGTTGCCTCCGGCTGTGTGTTCCCTGG 2733739 30 100.0 41 .............................. CAACACGAGGTCGAGGCCACCCTCGACCTCGGCGATGGCCG 2733668 30 100.0 38 .............................. AAATCACGATTCGCGCCGGAGGGTACGGCGAGGAGAAG 2733600 30 100.0 36 .............................. ACGAAATCTATCATGTCGGCTACGGGGCAAGTTTTC 2733534 30 100.0 39 .............................. ATTTCCGTCAGCATCTCGCGAATTTCCCCGATGCTCCCG 2733465 30 100.0 38 .............................. CGGCGCGGTGGACGGCGTTACATCTTGTGGAGCCGCAC 2733397 30 100.0 40 .............................. CAGGAGTCGACACGCCGGACAGGATGTCCGCCACCACCAT 2733327 30 100.0 38 .............................. TAAGGAAATTCAGGAGCAAAGGACACAGCTTGGGCACT 2733259 30 100.0 39 .............................. TTGACAATCCCACCAATCACCAATAACGGATCAAAGAGG 2733190 30 100.0 36 .............................. CCAATAAATCGACGATAGGACCGATAAAACCGGGAT 2733124 30 100.0 36 .............................. CCGGCGGCGGTGTCGGTTCAGGATCCGGAGTCGGTT 2733058 30 100.0 40 .............................. GTGCATGCGAGAGACGAGGCTGCGCAGTTTCTCGTCCGAC 2732988 30 100.0 40 .............................. CAGGCCCGTCGACGTCCGCGAGGAAGACGGCCTCGCTGTG 2732918 30 100.0 36 .............................. GCCATCCACCGTCACCCTCTCGCCATCGTCGGCGAC 2732852 30 100.0 40 .............................. GTGCATGCGAGAGACGAGGCTGCGCAGTTTCTCGTCCGAC 2732782 30 100.0 38 .............................. GCCATCCACCGTCACCCTCTCGCCATCGTCGGCGACGA 2732714 30 100.0 39 .............................. GCAACCAGGAATTCCTCCACATCAAACAGTGCCGCCAGC 2732645 30 100.0 36 .............................. TAAGAAGCGAGCTAACAGCGAAACATCATCCTCGGT 2732579 30 100.0 37 .............................. ACGGTCTTTGAAGAGGTCTGCAATTCCGGACGTCTGC 2732512 30 100.0 38 .............................. ATGTGCACGCTGAGAAGATACGCCGCATGAGCCTGATT 2732444 30 100.0 38 .............................. TTCCGACCGCCACGTCCGTAAAATTTCGTCGCCTGCCG 2732376 30 100.0 37 .............................. CTCGGGGTGCCGTGCGAGTTAGGGACGATCACGTCAA 2732309 30 100.0 36 .............................. TCCCCCGAGACCGTCCAGGCGCTCATCGCGCACAGG 2732243 30 100.0 36 .............................. ACGCAAGCCGCACGATACTCGGTACCTATGGGTACT 2732177 30 100.0 36 .............................. GATTGCTTTCAAGACTCGAAGTTTAATTTGCATCTC 2732111 30 100.0 36 .............................. CTCTCCCTGGCGGGTACGCACGATGACTATATCGCT 2732045 30 100.0 40 .............................. GGACGCCATTTCTCCCGCCGCGATCGAACTGGTGCAAGCG 2731975 30 100.0 38 .............................. TTCGGCATCGTCCCCGTCTGTTCCCCAGTGTCGTTGGT 2731907 30 100.0 37 .............................. AGCCGAAACGCCCTTCGGGGCGTCCACCCAGGGGTGG 2731840 30 100.0 36 .............................. ACCACTCGGGCGTACCCGGTGTCATTTGCGTGAAAA 2731774 30 100.0 38 .............................. GCGAGAACGTATATTCGCGGCCCAGGAGTTGCGCCCCA 2731706 30 100.0 38 .............................. ACTGGGAATATCTGGACAGAGTAAACTGGGAATGTATG 2731638 30 100.0 40 .............................. CATCGAAGCTCGGATAGCCGCTTCTTGTCTGCCCGCTCGG 2731568 30 100.0 37 .............................. TCTTTCTAATAAAAAACTTGATCAGGCATTTATCGAA 2731501 30 100.0 39 .............................. GGTGTGCATCAGCTTGGAAAGCCTTTCTACTATCTAAAG 2731432 30 100.0 40 .............................. TTCAAAACATTATGCCAGTCATCTCCCTCCACTCTCTCCC 2731362 30 100.0 39 .............................. GCTTCATTCGCTTCCCGTTCATCCGGAGATTGGTTTGGC 2731293 30 100.0 38 .............................. TTTTCATGTTCTGTATATACGTAAAATGACGTTGGTTC 2731225 30 100.0 38 .............................. ATGTTGGTATGGCAACAATAGCAGCAGGAAAGACATGG 2731157 30 100.0 40 .............................. CGACAACTCATACATATTTTTACTACGTTTTTTAAGATCA 2731087 30 100.0 37 .............................. GAATCTCATATCTTTCAAACTTTCGTCGTTTATCCGC 2731020 30 100.0 39 .............................. TAAATTTTGACTCCCTTTACAGTCAGCGCCTCGGCCAGC 2730951 30 100.0 39 .............................. GCCGTTCCCCGGCGACCGTATGCTACAAAGCCAGAGATA 2730882 30 100.0 37 .............................. ACGAGGAAGAGGCGCGGGAGCTATATCCTGCGCTATT 2730815 30 100.0 35 .............................. CGCCATGGCTTGTACGGCATGCGGAGATCTTCCGA 2730750 30 100.0 38 .............................. TTGAGCCGACCTCGCGGTATGGGGTGATTTTTTGGGAT 2730682 30 100.0 36 .............................. GCGAGGAAAAAAGGCGTCGATTTCGAGGACATCGTT 2730616 30 100.0 40 .............................. CGGCGGACCGCATTCGCCTCCGCCTCGATATCCGCCCAGC 2730546 30 100.0 41 .............................. CTTTTTCCAACCATGCCAATCGTCGTTCACGATGTCCGCCA 2730475 30 100.0 37 .............................. ACAATATGATGCAAGCCATAGGAGTGGACTAATATGG 2730408 30 100.0 39 .............................. ATCTTCAATTTCTTCTATATCATCTTCAGATAAATCATG 2730339 30 100.0 39 .............................. TCCATATAGTAAATATAGTCAACGGTCTTCCATTCAACT 2730270 30 100.0 36 .............................. TCGGTTGTACTACAATGCGCTTTCCACGTTTCCGCA 2730204 30 100.0 35 .............................. AACGTCGGTTATGAGTCATTGAACGGCATATATAA 2730139 30 100.0 36 .............................. CCTGGCTATCACTGGAAAAACGTTGCAGGATGTGAA 2730073 30 100.0 37 .............................. CCGGGGCGACATCATCGATCCAAGCGCATTCGCGGTA 2730006 30 100.0 40 .............................. AACTTCGTTGCGGCTGCGCTGGCGGCCATCCAGCCCGGGG 2729936 30 100.0 39 .............................. ATCTTCCGCATCAACTCAATCTCCACCACCATCAACCCC 2729867 30 100.0 38 .............................. AAAGGAGGTGAAGCCGAGATGACGCAGACCGAAGCCGC 2729799 30 100.0 37 .............................. CAGAACCCGCCGATGGACGACGATGTCCGGGAGCTGC 2729732 30 100.0 40 .............................. TTCCCCCCTCTCCACAGGCTCATGCCGCCGGGCCCGGATC 2729662 30 100.0 38 .............................. ACGCCGGCAGCGCGGCTGTGCTGACAAACAAACTCCTG 2729594 30 100.0 36 .............................. TACATCATTCCCCTTCTCGTGGGCGATCACTTCGGA 2729528 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 141 30 99.8 38 GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Left flank : CCTATCTTTACTGAGTACTCCGACCAGTCGAACTGGGCTTGTTCACCTGGAGCCGTCTCCATCCGCTGAACCCGCACTTCGGTGTGCGGCTGTTCTTTCTTCAGCCGCTGCAGACACCGGTGAACCGCAGAAAGTGAACCTTGGTACCCCATCTTCTGCAACTCCGCATAGATTCGTGTTCCGATCAATTGTTTTTCCACGTACATCTGTCGAATGTGCTCCAGGAATGGGTCTGTTGCCCGAGCCGACGGCTTCTTTCGCACATACTTGGGTGGATCGTCTCCCCGCAAGGCACGACGCACAGTGTTGCGCGAAATTCCCAGTTGCCGCGCAATCGCCTTAATACTGACACCGCGGGCATGGAGTGCTCGAATCGCAGTCCAATCCTCGATAGAGATCAACCCTTTCTCCCCCGCTCCCACTCAGATTAGTAGGAGCGTACCAGTCTATCTGGTGGGGGTCAATTTTCACTGACGATCTGGGGTCCATTTTCAGTGTAT # Right flank : CAGCTGTGCAACGGCGCGGGGCTAGCGTAAAGGGGAGGCGATCAGAGTCACCCACCAAAATATGGATTGGCACAATTCTTGCATGTGTCCACCCATCCCCACAGCTTCCACCTTCTCCCATCTCACCCCATCCCACCACCTTCCACCCATTTCCATGCCACCCCATCCATGCCCTCCCATCTCACCCTATCCAAAAAATAGCCATATAATTTTCACACAATTAACCCCATAGGCCCATAGTCCTATCCCCCTATATTCACAATTGTATCAGCATCCCACACAATTCCATCCCTCTCCGTTTTCGCAATTGTAGCCACATCTCACACAATTCCCCTTCCTATCCCGCCCATATGTCGGCAACATGTCTCCAATATTCCCGCATCATGTTGTCCGTCTCTCATGGACTACAATTATACGTTCGCCACCCCGGGAACCGCCGCCCAAGGGGACTACCGCCGCCCCCGGCTCGCCCCCGGGGACAACCGACCGGACACCCCCCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTGTAGGGTGCCTATGAGGAATCGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 8 2746839-2741711 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024955.1 Kyrpidia spormannii strain EA-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 2746838 30 100.0 42 .............................. CCGTTCAACAAGGAGATAGGACAACGTTTGAATCAACGTCTA 2746766 30 100.0 36 .............................. GACGATCCACTGGTACGGTACGTATGGCTCTATCCA 2746700 30 100.0 38 .............................. AAAGATCGCCATACAGCCCGTTTAATTTCGGGACACTC 2746632 30 100.0 36 .............................. GAAAGAGGTAAAATTGAATGAGATGGAGTGATGTCA 2746566 30 100.0 38 .............................. AGAGAAAAAGGACTGGTAGACGATAGTTTTTCTAGCAC 2746498 30 100.0 37 .............................. CTGAAGCCGGTCGGCGAAAACGCCTGGGGAATCGGGG 2746431 30 100.0 37 .............................. ACACAGATGGAAAGACTGTTGATTTTGTACGGACTGG 2746364 30 100.0 39 .............................. CCTCCCTTTTAAGCAACTTCAGCCGCCCGGCGTTCTAAT 2746295 30 100.0 40 .............................. TCCAGGGGCTGAACCCGGCCAAGAAGCAGTGCTACTTCGT 2746225 30 100.0 39 .............................. TCCGACCTTACATCCTCGACGCGCACGATCTGGAAGAGT 2746156 30 100.0 37 .............................. CTTAGTTCGTCCATTCGACCATCTCCCCCAAAATGAA 2746089 30 100.0 35 .............................. CCCGTAAGTTTTCGTGCCCTGAATGGCATTTTTGC 2746024 30 100.0 41 .............................. ATGGTGCGCTTTACATCAGCGTTACCGATAGTTGGTACACA 2745953 30 100.0 36 .............................. ATGATTAAAGAGGGCGAAAAATGGGAGCCTGGAGAC 2745887 30 100.0 39 .............................. CACTGACCACTCCGCTCACACAGGCACGACCGGCGGGGA 2745818 30 100.0 38 .............................. CGAATGGCACGGCCTCGACGCGGCGAACGCGCCATTTC 2745750 30 100.0 39 .............................. TCCACGTCTCGAATCCACAATGCGGGCACGGTACGGGCG 2745681 30 100.0 38 .............................. TCGTTCAGCACTGGCAGCAAATCACCGGGTTCCTGGGC 2745613 30 100.0 39 .............................. GGCACAGGAATGTAATCCACATGCCCTAGATATTGTATC 2745544 30 100.0 38 .............................. GTTGATCGCCCGCGCGCGCGTCCAATACATCATCAGCA 2745476 30 100.0 35 .............................. CCGAGAATCTCGCCCAGCTCCGCAAGCTCCGCGTC 2745411 30 100.0 38 .............................. ATCACGGTCTTCAGCGCCATCTGGTCGGTGAATTTCTG 2745343 30 100.0 37 .............................. CACTGGCTGGCCAACGGGACCATCCCGTGGCCGAGGG 2745276 30 100.0 39 .............................. TCTCTGGGTCGTGCAAACTCACTCACCAGCCTCTCCCTC 2745207 30 100.0 36 .............................. ACCGGGCTCATGTCGAACCTGAAGGACACCATGAAT 2745141 30 100.0 35 .............................. CCGACGAACGAGCGGGAGGGCGCGAAGATCGGCAT 2745076 30 100.0 38 .............................. CTCACGGGCAAACCCTCCTATGGTATACTCGAAGAAAA 2745008 30 100.0 36 .............................. TTTACGCCGTCGAAGATCATCTCCACCTCCATGTCG 2744942 30 100.0 39 .............................. AGTCGCGAAGGTCAGAAGAACCTTGCTAAAGCCTGGAAA 2744873 30 100.0 39 .............................. CCCCTTGGCGCCGGATTTCAACTCGGCCCCGACGACGTT 2744804 30 100.0 36 .............................. TCGGCTGACGAAGTTAAGGGCCTCATTGAGGGGGCC 2744738 30 100.0 40 .............................. CAAATCAGGCGCTCAAGGAGGCGGCCGAACCGCTGGCCGA 2744668 30 100.0 39 .............................. ACCAGATCTGCGTATCCGTTTTCCTTGAGCCAGTGGATA 2744599 30 100.0 39 .............................. GCGAAAAAGACGGAAATATCATCCTTTACGGCGGCCCGC 2744530 30 100.0 40 .............................. CCACGTGGTCAGCGTCTTGTCTCGGATCTCGGCTTGCCTG 2744460 30 100.0 35 .............................. TCGCCAAGGCTGAGCGTGGGATGCCGCTCAGCGAG 2744395 30 100.0 37 .............................. CGCCGTCGTGAATTTCGACACGCTCGCAGACGCCAAC 2744328 30 100.0 39 .............................. CCACCTGTCGCCACAGTTTCACTTTTGGCTTCGGCGCGG 2744259 30 100.0 39 .............................. CGGCAACCTGGAGTCTGTCTTGATCCGGTCCCCATGCCG 2744190 30 100.0 38 .............................. TGGTTTTCATTCCACCCACCCCTCCCGCAACCATCGGA 2744122 30 100.0 40 .............................. CCGCATTTGGGGCATTCCTTTTGCGGGACTGGATGAAATT 2744052 30 100.0 38 .............................. CAATTCGTGGTAGACGGTCTCTGCGAACGCATAGGCTT 2743984 30 100.0 39 .............................. GGAACGGATTGGGAACGGACCTTGGAGGGGTTCAGTTTC 2743915 30 100.0 38 .............................. GCGCCTGGACGCCGAACGACTGGAGCAGTCCGACGAGT 2743847 30 100.0 37 .............................. CCGTACTGGCAGAAGTCAAGCCTTTAGTTACCGCTTC 2743780 30 100.0 39 .............................. ACCAGACATTCATCAAGTGGAACGCACGCCTAACTGATG 2743711 30 100.0 39 .............................. GTCTCAAACTGGAGGTGTCCAGCGGTCTCGGCTGGTCCG 2743642 30 100.0 36 .............................. CGGTTCGGCATCCCTGCAATCCCACAAGATCACGAT 2743576 30 100.0 38 .............................. GGCGATCTCCTTGTCAGTAGCCGTTTTCCTGCCTTTCG 2743508 30 100.0 35 .............................. AACCGCTTCCCGATCCTTTTCAATCTCTTGCATAC 2743443 30 100.0 37 .............................. CCCTACGCTCCACCTGGTGTTTTCGAGCGCACGCATG 2743376 30 100.0 39 .............................. CTATGATCCTCTCGTCCAACTCTTTCTGTGCTTCAAAAA 2743307 30 100.0 39 .............................. TTCTCAGCCGACGCGCTTTTCTCTGTAAAACGCCGCCAA 2743238 30 100.0 40 .............................. TCCATTCTGCGGACACGTGGATATCAGTCGGAACTGGAAA 2743168 30 100.0 39 .............................. ATCAACCCCTAGATATTCCTCTGCGGTGGCTTCATCCCC 2743099 30 100.0 35 .............................. TAAGAGATGCGTTGGAAGTCACCTTTCTTCTCGCC 2743034 30 100.0 38 .............................. AGTTTCGTTTCGGCTTCCTTTTCCGACCGATAGCCGCG 2742966 30 100.0 39 .............................. ATCAACCCCTAGATATTCCTCTGCGGTGGCTTCATCCCC 2742897 30 100.0 36 .............................. TGTTGATTTTATTATGGCACGATGCCATACATAAGT 2742831 30 100.0 38 .............................. GTTGAAACAAAAGGCATTCCAAGGTGCATCTGCAACTC 2742763 30 100.0 40 .............................. ACGAAGGAACAGGGCAATGGGGGGTTGCGGCGTATACGGC 2742693 30 100.0 41 .............................. ATTTCGATGACGTCGTTCAAGCCGGGGTGCTTGGCTACATT 2742622 30 100.0 36 .............................. CTCCGCCCAACTTCTGCACGCGGTAAGGGAATCGAG 2742556 30 100.0 39 .............................. TTTCCGGCTCCGCCCGACCGCAATGGTGATGTCTGCATC 2742487 30 100.0 38 .............................. CCAGCGAGTCCCCTGTAGTGCCTGCATGAGCGCGAACT 2742419 30 100.0 39 .............................. TCTAAGGCACTGAGCATGGCCTTCGTGTCTGCGATTTTC 2742350 30 100.0 39 .............................. AACCTCGAATCGAGGAGGCGATTTTTTCCCGCATCCTCA 2742281 30 100.0 36 .............................. CAGCCTGGAGAAGAAGCTTCTGTACCCCTTCCTCAC 2742215 30 100.0 38 .............................. ACCCCGAAGATGCTGTCTTCGGGCCGACGAAAGAAGAG 2742147 30 100.0 40 .............................. GATTTATCAGGCAATATCCTATGGCCATGCGGGGGAAAGT 2742077 30 100.0 35 .............................. CAGAAGTCGATGACGAAGAAAGCCAACAAAAAATT 2742012 30 100.0 38 .............................. TATCGTCATCGAGGCGTTTGTGGCTAGGAAATGTAAAA 2741944 30 100.0 36 .............................. CTTCACTTCCGCATATACCCATCTACAAAACGTGAG 2741878 30 100.0 39 .............................. TTGCACCGGGGTCATGGACGGACCAAGTATGGGACGATA 2741809 30 100.0 39 .............................. ATGTGAAATCCTCATCGCAACCTAGAACACCCTCCAATT 2741740 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================== ================== 76 30 100.0 38 GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Left flank : AAAGCCTGGTAGGTCTCCAGCGGGATTTCATGACCGTCGACGCTGCGTACCCGAACTTTTTCCACAGCCACCTTCCGGCCCCCAAGCATCACGGAGCCCTTTTCCTTTCCGTGTCGCACAGCCTTGCGCTTTGGATTGTGTTTCCCTTTGGGGCCCACCAAAGCTTCGACTTCCTCTCGCATCATGAGTTGAATCACTCGAAGCCCGGTTTGAACCGCCAAGGCCATGAGTCCCTCTTTCGCGCTCTCCATCACGTCCAGTAGCGACAGTTGGAGGGTGAACTGCTGAAAAGGATCTAGTGTCGAAAACAGGCTCTGGTCATTTCTCACAATTTGATGTACCCTTGATTTCATAGGTGGCGTTCTCCTTTCTTGTTGTGCCCAATCCCGTTATACCAAACGGGTTCAGGAGACCGCCACCTTCAAATTTCCACGAAACCTGGGACAACGCCGAGGAATGGAAACATCCCATACCGAAGTTAGAAATCCGTATTTTTGCAA # Right flank : AGCCGTTCCACGCGATGTGCATTCAGCACTACATGAGACGTTCGTAGCGTTGTTGATCGTCAAGTAGAATTGACCCCGGTTTGGCACTGAATTTTGACCCCCCTCAGAAAACGGAAGTCATTGCTTGCCATGTCGTGTCGTCACTCAGGGTTCATCGTCGTCGGCCGTTGTCCCAACGGGCCGAGTGTATCGGCCCTGGCCGCTCCGTCAAGGGACGCTTCGCTCGCCCAAGGGCGCCCTTGACCTCGCGGCTGCGGGCCGATGGGGGGCCCTTAGGGGACAACGGCCACGTGTGCGTGTCGCACACGCACGGACAACATGGGGTACCAAGTCCGCCGGGCTGGTGATTAGGCGGAGGCATCGGCCTTGAGCTTGTCCTTCATCCGGTAACTGTGACCCTGAATGTGAAAAATGTGACTGTGATGCACCAGACGATCAATGATGGCGGCAGAAGCAATTGTATCGCCAAACACCTTGTCCCACTCGTCAAAAGGCATGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTGTAGGGTGCCTATGAGGAATCGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 9 2752962-2748332 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024955.1 Kyrpidia spormannii strain EA-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 2752961 30 100.0 37 .............................. CCGTCTCCAAACTCATGTGACTCCTGAGCAACCTCGG 2752894 30 100.0 37 .............................. TCCTTCTCAATCGTCGCTTCAAGCGACTTGATATAGA 2752827 30 100.0 37 .............................. TCCTCGGCATCGTTCCGTATGGCGACGACACGCTTGA 2752760 30 100.0 39 .............................. ATGAGCTTCCACGCGGCCTCATCCCACACCACGCCGAGC 2752691 30 100.0 39 .............................. ACCAAATGAGGCAAGCGGTGGAGCGGCAAGGCGGCGCCC 2752622 30 100.0 39 .............................. TCGAATCTCCGACTCCCGTGGCACTCTCGGCTGTTTCCC 2752553 30 100.0 39 .............................. TTCTTTCTGGGTATAATATACCACATAATATATTAGTCG 2752484 30 100.0 38 .............................. GGAATGGATGAAGAACACCGCGACGACTACGTGGCAAA 2752416 30 100.0 39 .............................. ATGCCTTCCGTGAGCATGTTCATCAGGTTCGGCGCCCAC 2752347 30 100.0 36 .............................. CGGCTGACCTCTTTGCCGTTTGGATCGTACAAGATC 2752281 30 100.0 39 .............................. CCAGACTGGTTTCATCCTTGCGCTGAAGCCATTTGCTGA 2752212 30 100.0 35 .............................. ACGGATGATGGGGGACCGTGAAGTGATCCAACTGG 2752147 30 100.0 35 .............................. ACGTACGGATACACGATCATCCTTGACGTGTCATC 2752082 30 100.0 40 .............................. CAGCGGGGGGAACTTGACTCAGGTGCAAGAGGTGGTTGGC 2752012 30 100.0 38 .............................. ACGATTATTTGCTCCAAAAGTTTGCGGACGCGTTCGAA 2751944 30 100.0 38 .............................. TCAGCGGGATCAAGCTGGACCGATACATCACGTTCTCC 2751876 30 100.0 35 .............................. CACCTCGTGGCCAGGTCCTGGTTTACATCCGCGGG 2751811 30 100.0 40 .............................. CGGAAGGAAGAGCTGATTCCCTACGTGGGCTGCGTAATGG 2751741 30 100.0 40 .............................. CCTACCATTTTTGATCGCCTCTTCCTGGCTCCAACAGAAC 2751671 30 100.0 40 .............................. TAAGTGGATCGGCGGCTTCGACACCAAGAAGGCAGCCGAA 2751601 30 100.0 38 .............................. ACTTTGGCGAGGCAATCATTCACAGGCCCGACCCCCTC 2751533 30 100.0 39 .............................. TCGTTTGGTGGGCGGGATGCAGCGCCCGAGCAATCTCGC 2751464 30 100.0 38 .............................. CGCCACCTCCACATTTTCCTCGTCGTGCACAACGACTC 2751396 30 100.0 39 .............................. CTAGCTTCGCGTCCGCTTCGGCAGCCTTCCTCTCGGCCT 2751327 30 100.0 38 .............................. CGAACGAAGATGGCTCCGGCGTCAAACGAGAGAACATC 2751259 30 100.0 36 .............................. CGGCGACGTGTCCGACGAGGATGTCATCGCCGCAGA 2751193 30 100.0 38 .............................. TCTGGATCATAGCCGACCATGGACAGGAACGCCTCAGA 2751125 30 100.0 38 .............................. TCTTCCGCCTGGTCTTCGATCATGTCGGCCGCGTCCAG 2751057 30 100.0 39 .............................. CTCCGTACGTGCCGGGAGATGGCCGGGTACTCCCAAGAG 2750988 30 100.0 36 .............................. ATGTGTTACAGGAGGCCAGCATGTGATATACTGGCC 2750922 30 100.0 35 .............................. CAGGGCCAAATGAACCACCAAGCGTGAAGTTAGTC 2750857 30 100.0 36 .............................. GCTTCTCAGGCGTATAGCTGGGGTGCGAACCTCATC 2750791 30 100.0 39 .............................. GAGATGGAAAAGAAATACCGCAAACATGTTGTTGTGCGG 2750722 30 100.0 39 .............................. CTGGGATGACGAAAGAAAGATGTTGGTCGGAGAGATGTC 2750653 30 100.0 37 .............................. TAAGCAACGGACGTCTGCGGCAACAGAGGTGTGCCCC 2750586 30 100.0 35 .............................. CCTATCTGGAGTCGATCGGCGAAGGGGCGCGGGGA 2750521 30 100.0 37 .............................. ATTCTCTACATCCGGGACGGGAACATCGTGGCACCGC 2750454 30 100.0 36 .............................. TGTGCCGGTCAACTATGCCCCGATAGATGCTCCTAC 2750388 30 100.0 38 .............................. CGGTTTCGTATGATTTTGTCATTTTTATTATACGAAAC 2750320 30 100.0 39 .............................. TAATCCTAGGTTCTATCTTTTTCACGGGTGCTTTCTTTG 2750251 30 100.0 35 .............................. CGTCGCTCCGACCGTCATGCTTGCGGGGGCGTCCA 2750186 30 100.0 36 .............................. CTTAGTTCGTCCATTCGACCATCTCCCCCAAAATGA 2750120 30 100.0 41 .............................. TACCGCGACTATCGGGCGATTTTGTCGGTGCTGAATGAGGA 2750049 30 100.0 40 .............................. TACCGCCGCCGCAACCCAAAAGACACGAGATAAGCGTTTG 2749979 30 100.0 35 .............................. CTCCACACGACATCTGCGAAGGTGATCCGCCGACC 2749914 30 100.0 35 .............................. CCGCGAGTCATTCCAGCGCGTTTCGCCGCTTCTTC 2749849 30 100.0 39 .............................. CGGCGCAAGGTGGAGCTGCCGATACGGCGCATGCTACTT 2749780 30 100.0 40 .............................. CGGAGTTTTTCGGGGTGAGCACGGACTACCTGCTCGGGCA 2749710 30 100.0 39 .............................. ATCTCGATCTTTCGGCGGATCGCATTCGCCTCCGCCTCG 2749641 30 100.0 38 .............................. TCTGCTGATTTCAACCTCCATCACCCCTCGCCCAATTC 2749573 30 100.0 40 .............................. TGCATCCAATCAACCAGAGCCTTCCTCGTGTCCTCGTCGA 2749503 30 100.0 34 .............................. CCCTCACCCTCTGCCTCCCGTTCCGTAGTGCCTC 2749439 30 100.0 38 .............................. AGGCGATTGACGAGTTGGAGAGATTGCGGAGGTTGGAG 2749371 30 100.0 35 .............................. GACATATCCGGATGTAAATAGATAATGGAATAGAG 2749306 30 100.0 36 .............................. TCCAGGAACCGCAGTCGGATGATTTTCGCTTCATCC 2749240 30 100.0 37 .............................. ATTTGCCGGAACTGGACCGGAAGGCCACTCGGCAGGC 2749173 30 100.0 38 .............................. TGCACCGACTCATGAATAGGATTACGTCTAACATTTGA 2749105 30 100.0 40 .............................. GCATTTTCCGGACTGGTAGCCGCGATTGGGGCGGTGGCGA 2749035 30 100.0 40 .............................. TCACCAAGCCGTTCTCTTTGCCCTCATGCGGGGTATACCA 2748965 30 100.0 36 .............................. TGTATGACCACTTGGTAACGTACTCAACTATTCAGC 2748899 30 100.0 36 .............................. CTTAAAAGGGAGGCAGCTAATATGGCGTACTACACT 2748833 30 100.0 39 .............................. TTTATTCATACAACAGATGCGAATACATATTCATACATT 2748764 30 100.0 37 .............................. GCCGTCCATTGAATGAAGTCTCCAGCAACATCGGTTG 2748697 30 100.0 35 .............................. CGTATAATGCTTGATTTTATTGGCTTTTTTCATTG 2748632 30 100.0 37 .............................. ACCCGTTCTTCCAGCATGGCGGCCCTGGCCATCTCGA 2748565 30 100.0 37 .............................. TATCTCTCTTTAAACAACGTTCAGCAGCGTCAAAGCT 2748498 30 100.0 38 .............................. TATCTCTCTTTAAACAACGTTCAGCAGCGTCAAAGCTA 2748430 30 100.0 39 .............................. TCGACAGCAACCGCATAACCGTCTATGCGGTTTTCCCGG 2748361 30 90.0 0 ...........................GGT | ========== ====== ====== ====== ============================== ========================================= ================== 69 30 99.9 38 GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Left flank : GGCTTGTTCACCTGGAGCCGTCTCCATCCGCTGAACCCGCACTTCGGTGTGCGGCTGTTCTTTCTTCAGCCGCTGCAGACACCGGTGAACCGCAGAAAGTGAACCTTGGTACCCCATCTTCTGCAACTCCGCATAGATTCGTGTTCCGATCAATTGTTTTTCCACGTACATCTGTCGAATGTGCTCCAGGAATGGGTCTGTTGCCCGAGCCGACGGCTTCTTTCGCACATACTTGGGTGGATCGTCTCCCCGCAAGGCACGACGCACAGTGTTGCGCGAAATTCCCAGTTGCCGCGCAATCGCCTTAATACTGACACCGCGGGCATGGAGTGCTCGAATCGCAGTCCAATCCTCGATAGAGATCAACCCTTTCTCCCCCGCTCCCACTCAGATTAGTAGGAGCGTACCAGTCTATCTGGTGGGGGTCAATTTTCACTGACGATCTGGGGTCCATTTTCAGTGTATATCAACACGAGGGCGAATGGTGGTCGCGAGCGACG # Right flank : TGTCCCGGTCGTCGTGGATTTTCGTGACGGCCTTTTTCTTCAATTTACGCGGTGATGGATTTGTTTTCCTGCTGTGGTTGCGGATGTACACATTTGTGTAATGCATCAAGAAGCAGAGGGATTTGGCGAAATCCCTTGACGGTCCTGAACTTTTTCTCCGCCTCCAAAAATCCTGCAGCCGCCCAGCGCAGCACCTGTTCCCCATTCTGCCAGCGCTTGACGTTCCGACTCACCATCCGCACCTTCTCATTGGCTGATTCGATCGCATTCGTCGAGCGCAGAGTTCCCCGAAGCAGTTCCGGAACTCCCAGCCGGATCACGGTCACGGTCTCTTCCATCCCCTCGCGCAAACTGGCTGCTGCTCCTGGATGCGACTTCTCAAGTTGTGCCGCCAAGCGCCGCAGGGCCGCCAGTGCCTCTTTTTCGGTTTCCTGGCGCCAGGCCTCCCGCAATTGCCTCTTGACCCAATCTCGCTGTTTCTCCGGCAGATGCTCCAGGAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTGTAGGGTGCCTATGAGGAATCGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 10 2763226-2755635 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024955.1 Kyrpidia spormannii strain EA-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 2763225 30 100.0 39 .............................. CAGATTCGATAGCCCCGAGCTTTGCGGCGCGGTCGACGG 2763156 30 100.0 39 .............................. AGGCTTCGACGGCTCACCACCAGAGCCCCCAGAACCTCC 2763087 30 100.0 36 .............................. TCCTCCCCCGGCACCACCGGCCCCCGGCGAATAGAT 2763021 30 100.0 38 .............................. TGGTCGGCGGCCGGACGAGCATGGGGAAATCGGCGTTC 2762953 30 100.0 39 .............................. AGTATCACCCCGGATTCGGATGGCACATGAGCATCAGCC 2762884 30 100.0 39 .............................. CCCCCACTATCGCCGCCCAGGGTTTTACTGCGCACGAAT 2762815 30 100.0 39 .............................. TTGCACTTCCGCCGCCGGTGTCGCCCCCGGCCTGTCCTC 2762746 30 100.0 39 .............................. TCCTCCCCCGGCACCACCGGCCCCCGGCGAATAGATCAT 2762677 30 100.0 37 .............................. CCGCGCCAATCGTAATTTTCGCCCCCACGGCTCTCAC 2762610 30 100.0 36 .............................. GAGAGAAGATGATCGAAGTTGGAGAGAAAAACGAAT 2762544 30 100.0 39 .............................. AGACGAATTTTCTCGATGCGGCGACCGTACTCGAAAGGA 2762475 30 100.0 39 .............................. CGGCAGAAGCGATCTGGAGGCGCGGGCACGGAGCGTTTA 2762406 30 100.0 39 .............................. ATATGGCTCAGGCTCAGTCATCCAAAGGCCAATTAGGCA 2762337 30 100.0 39 .............................. TCGCGTAAACTCCTCACCCAATCCGGGTGCATCGGACGA 2762268 30 100.0 38 .............................. CGGGAAGGAGCCATCGTGGAGGTTCAGCAAACGGAAGC 2762200 30 100.0 35 .............................. CTCTGCGAAGTTTGACAATCCTCTCGGCAAACACA 2762135 30 100.0 39 .............................. TAGAATAATACGCCAACCGTGATGTTCATGCTTTCTTCC 2762066 30 100.0 39 .............................. TCCAAAAGGCTGGCCACAAGGTCCGGATCATGCACCTGA 2761997 30 100.0 37 .............................. CGATGCAGCCGGGGTAGGGACGGTCACTCACTCCGGA 2761930 30 100.0 39 .............................. TACAGGGTGACACGAAAACTCCGGGCCGCCGCACAAGAG 2761861 30 100.0 38 .............................. CAAGTCTCGTGATCGCCCCCGGATACAACGCCGACAGC 2761793 30 100.0 40 .............................. TGTGATGAGTCCGAGGGCCACAGCCTGCGCGAGGTCATCC 2761723 30 100.0 37 .............................. GAAACATGCCGTCGGACATCGATACCAATGAGGGAAG 2761656 30 100.0 38 .............................. CACCGTTCCCGCGTTTCGCCGAGGGTGGCGAGGGCGGA 2761588 30 100.0 40 .............................. TGTGATGAGTCCGAGGGCCACAGCCTGCGCGAGGTCATCC 2761518 30 100.0 37 .............................. GAAACATGCCGTCGGACATCGATACCAATGAGGGAAG 2761451 30 100.0 38 .............................. CACCGTTCCCGCGTTTCGCCGAGGGTGGCGAGGGCGGA 2761383 30 100.0 36 .............................. CGATTGCGGTGCCGGAGCCTCCCCGGGAGGCACATA 2761317 30 100.0 35 .............................. CGCGGGCTTGATCCGGTCGATGCCCGCCCTCCGGA 2761252 30 100.0 38 .............................. TACGAAGCATTCCCAAGTCTTGGGTACGGAGCGATCCC 2761184 30 100.0 36 .............................. ATGTCAGCGGTGTAATGTCCGCTCCCACCCAAATGG 2761118 30 100.0 38 .............................. CCAAACGTCTGGCTTGGCGTTTCTGTCGAGAACCAAAA 2761050 30 100.0 38 .............................. TTCGGCAAGGACAGCCAGAATCGATCAGACTTTGAACT 2760982 30 100.0 36 .............................. TTCGGCAAGGACAGCCAGAATCGATCAGACTTTGAA 2760916 30 100.0 38 .............................. AGGGTTATTCGCCGGTCTCCGAGGTCGAGGACAGCCTC 2760848 30 100.0 41 .............................. GCGAGACACGAGGTCAAGCGATCATGCGCTGTGAGTTGAAC 2760777 30 100.0 39 .............................. CAGTATCTCGTATGAGGAAATGCTTCGGATGCGCGAGGC 2760708 30 100.0 40 .............................. TGACATCCCTCCATATGTGTTTTTCAGAGCATCCGCGCTC 2760638 30 100.0 38 .............................. ATGACTACGAAATTATCGAGGTCGAATTTGATGACGAT 2760570 30 100.0 40 .............................. TCACAGTAAAACGCAGTTCCTAGGCACCAATTGCCAAATG 2760500 30 100.0 38 .............................. CTGTATGGAAAGAAAATGGTCCAGGTTCTGGAGTCGTT 2760432 30 100.0 39 .............................. GCAATCGCTGCAAACGATCCTGAGCTAATGGAAATCAGA 2760363 30 100.0 40 .............................. CCGAGCTTCACAGGACGCCCACCTTCTGGGCTAACAAGTC 2760293 30 100.0 40 .............................. ATTTCGTTGCTGAAATGATAATGTTTTGGTTCCTCGTGCG 2760223 30 100.0 37 .............................. TTTGTCCACGGGAGGCCTCATAGCATACCCAATCACG 2760156 30 100.0 40 .............................. CGCTGTTCTGCGCCTCCGAGCAGGTCCGAGAGGTATGCTT 2760086 30 100.0 36 .............................. AGCAAACGCGACCGCACGAACCGAATCATCGACCTG 2760020 30 100.0 41 .............................. CTCGTAAGCTTTGGGCGGCCTGGGCACGGCATCGCCGCTCA 2759949 30 100.0 38 .............................. TAGCCGTCGTGTATCGGATTCGTGCCTCCAGCCATGCA 2759881 30 100.0 39 .............................. TTGGACGTGGATAGAAGAGGCGTATCAGGTGACGAACGA 2759812 30 100.0 38 .............................. TCGCCTCCAGGTATCTCACCTGTGGCGGGCCAAGCAGA 2759744 30 100.0 39 .............................. TGAAAGCCCACTGGGGGCCCGTCCGGCAGTTTGTGACCA 2759675 30 100.0 38 .............................. GGTGCACGTAGATCCTGTACTGCTGGATCCTCTGGATG 2759607 30 100.0 36 .............................. CAGACGAGCGTGGTTTCGTGGGTGAGCAGGGTTCGC 2759541 30 100.0 38 .............................. AACCGACACCGCCGGCAACCGGATATGACCTGGCCCAA 2759473 30 100.0 38 .............................. ACCTCGGGCAAATAAAAATGGCCCGAATCCATTCCGGT 2759405 30 100.0 39 .............................. TTGACAACTCGGGTGGCTGTTGCCCGGCTGGCACGGGGA 2759336 30 100.0 40 .............................. CCCGAAGTTTTCCAGGATACTCAAGCCCTCGTTCGCCAAC 2759266 30 100.0 39 .............................. TATTCCAAGGTGATCCGGATGTCGTAAATCCAAAAGGCA 2759197 30 100.0 38 .............................. AGGAAACGTGACCGGATCGCAAAGGCACTCATGGAAAA 2759129 30 100.0 40 .............................. CTTCGACGTTCTCCTATGATGGCTCCAATAACTTAATCGG 2759059 30 100.0 39 .............................. CCGAAGTCGACGTACCGCACGAGTATGGGTATCCGACGG 2758990 30 100.0 38 .............................. TCGGGAGTACGCCCAAACCTGGATAGACGAAGGTGAAA 2758922 30 100.0 38 .............................. AAGAGGAGGGAGACGAGGGCGGGGAGGGAACCGGCTTG 2758854 30 100.0 37 .............................. ACATGGTTTATGTCTCACCTTCCGCCGCAGATCCCGA 2758787 30 100.0 39 .............................. TCGGGAGTACGCCCAAACCTGGATAGACGAAGGTGAAAG 2758718 30 100.0 38 .............................. TTGAAATCGACGCCCGCAAGGGCACGTGGCGTAAATTC 2758650 30 100.0 38 .............................. CCTACGCCGATGTAAAAACCTCCGACGATAACCACATG 2758582 30 100.0 39 .............................. GCGAACAACCCGATGGTGGTGGCGGACATCCTGTCCGGC 2758513 30 100.0 38 .............................. TGTTCCTCGGGGCGACGGGAAGTGGGAAAAGTTACCTG 2758445 30 100.0 40 .............................. ATGTGGCTGTGGTTCACGCTGGGCGGGAGGGGGAGAACGA 2758375 30 100.0 38 .............................. AACCGCTGCGGAAGGATGTCGCCGCACTTCGGGCCGAT 2758307 30 100.0 35 .............................. GCGAAATCCAAGGCGGACATTCAAAATGAGCGGGA 2758242 30 100.0 41 .............................. TACGCTCCTCTCGGAATCCACGTCGTAGAATCGCCGCTTAC 2758171 30 100.0 36 .............................. TGAACGAAGGCCGATAGGACACCCGTCAGATAATCG 2758105 30 100.0 39 .............................. TAATTCAAAATTGTTCCCCCCGCTGGCGGTTGTGGTACG 2758036 30 100.0 39 .............................. CCCCCGACTCCAATCGGCCAGTGCGGTGATCGCGGCGGC 2757967 30 100.0 38 .............................. AATGCCATCGATCTCGGCATTTTTACGTAATTCCAATC 2757899 30 100.0 37 .............................. GAGACGCATTGTCGGCTGCGTTACTGGCCGCCATCGG 2757832 30 100.0 36 .............................. TCGCAACAGGGACGTGATCGAAGGTGGTCGAATCGA 2757766 30 100.0 40 .............................. TAGATTCGACATCCCCGAGCTTTGCGGCGCGGTGGACGGC 2757696 30 100.0 39 .............................. TTTGGATGGCATGGACAGGAATTTGTTGACAATCCCACC 2757627 30 100.0 40 .............................. TATCGTCCGGATCCAGAAGACAGTTTTCCCCTTCGTCCTT 2757557 30 100.0 38 .............................. TCGTCCGTTTCTCCCAACAATTCGGCCCGCAACTTGAC 2757489 30 100.0 35 .............................. TTCTGCATCGGTAAAAGGCCCAAAAGCAGATCGGA 2757424 30 100.0 38 .............................. AACTCCATCACCGACGAGCAGTACGCCAGGACCAACTG 2757356 30 100.0 35 .............................. TCGGCGTCGCAGCCAGCAGCCGCATCTCTTGGACC 2757291 30 100.0 36 .............................. GAAAACCATAAGCACAAAATGAAGATGGGCTTAAAT 2757225 30 100.0 37 .............................. TCTATGCGACGCGGCCACGGTGCCATCCACAGAGTCT 2757158 30 100.0 38 .............................. TTTCGTGCCCACCGCCACTTGCTCCACCCCTTTCTTCG 2757090 30 100.0 40 .............................. ATCCTGCTGTCTGTTTTTACGTCCAGTTCATGAATAAGGC 2757020 30 100.0 40 .............................. CGCAGAGGAAAGGCGAGAAAACTTTTCGGAGAGTCTCTGG 2756950 30 100.0 37 .............................. CGGGCGGCAGAAAGATGGGGTATGGTCGCCAAAAACG 2756883 30 100.0 37 .............................. ACGATTCTCATTCAGGTAGCAGCCTTGCTCCTTTTCT 2756816 30 100.0 38 .............................. TCAGCGTAAATACGCATTACTCCATCACCCCGAGCACC 2756748 30 100.0 39 .............................. CAACCCGCCGTATAAGCATTACGACGAGCTGGTCGCGGC 2756679 30 100.0 38 .............................. AATCGTTGTTGGGCCACTGTTGCTTGGTCAATGGCTTG 2756611 30 100.0 38 .............................. TCGCAACCCCGGACGCCACGTACTCCAACACACCCTCA 2756543 30 100.0 37 .............................. CCAATAAATCGACGATAGGACCGATAAAACCGGGATG 2756476 30 100.0 38 .............................. TGGCATGGAAGCCAAAGGGCTTGTGAGGCTGGCCGACA 2756408 30 100.0 38 .............................. ATGTGCGAGTGATTCACCGACGGCGGGAGGGGGAGGAT 2756340 30 100.0 40 .............................. TGCGCATACTGCGATGACAAAAAATGCGCGGTGTGCCCGA 2756270 30 100.0 35 .............................. GTAAATTCAAGGTCCAAAAAAGTCGGGGCACTTGA 2756205 30 100.0 38 .............................. GCGGGGTAAAAAAACACAACCCCAGGTGACGGCCTGGG 2756137 30 100.0 38 .............................. TCAAGGTGCATCCCCGCTCGGTCGGGGTTATGCGGTGT 2756069 30 100.0 38 .............................. TTGATGCGGGCCCGCTCGGCCGCAAGGACCTTCCTGTG 2756001 30 100.0 38 .............................. TGCGCGGATGGCGTAAAGCTGGCCGGCTTTCCTTCGAT 2755933 30 100.0 38 .............................. ATCGTCAAACGCCAGTTTGAGGCGGCGCAGGAAATGTT 2755865 30 100.0 35 .............................. CGTACATCGTTCCGTACAAAACCAGAGGGAAGATG 2755800 30 100.0 37 .............................. TCCGATCGACTCTCCACACCGCGGACGATTTGACTAA 2755733 30 100.0 39 .............................. CTCGTGGACGACAACCTCCGAGGCCGCCAACAAGGCATC 2755664 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 112 30 100.0 38 GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Left flank : ATTCGGATCCGGACGGATAACCTCTTGATGGAAGCTTCCTTGCCACCGGCGGAAAGCGGGTAATCGACCTCTCGGCGGGCGGGTTTTCGACAATAAACGACAACTGAATCCTCCGAGAGGTCCTCGTTTGTGGAAATGACGTCGAACTTTGTCGAAAATAGGTAGATAATCAATTCCATGTTTCGACATTCTTCGATATGCGAAAAATGGGCTCGACCCGCGGGATGGGAGGTATTAAGCGATCGCAGTAAGCTAAAAATTCTGATCTCAACAACCGCGCCCTCTACAAAGGAGGGATTTGTTGCAATTCCTGTTTATGGAAGTGTCGTCGATCAGAGATCGAGCAAAAACCCCGGGGGATCGACGACAAGAGACGGGTCGCTCAAAGTCACCAGAATCCGCGTCATCTGAAACAAAGACTCCGTTTCAGGAGTTGACGCACTTCTCCGCACACTGTATGCTAGTAGCGACAGATCCCTTGTATAATGCGGAAAAAATGG # Right flank : CGAAGCTTCGAGGTGTTGATCGTCAAGTAGAATTGACCCCGGTTTGGCACTGAATTTTGACCCCCCTCAGAAAACGGAAGTCATTGCTTGCCATGTCGTGTCGTCACTCAGGGTTCATCGTCGTCGGCCGTTGTCCCAACGGGCCGAGTGTATCGGCCCTGGCCGCTCCGTCAAGGGACGCTTCGCTCGCCCAAGGGCGCCCTTGACCTCGCGGCTGCGGGCCGATGGGGGGCCCTTAGGGGACAACGGCCACGTGTGCGTGTCGCACACGCACGGACAACATGGGGTACCAAGTCCGCCGGGCTGGTGATTAGGCGGAGGCATCGGCCTTGAGCTTGTCCTTCATCCGGTAACTGTGACCCTGAATGTGAAAAATGTGACTGTGATGCACCAGACGATCAATGATGGCGGCAGAAGCAATTGTATCGCCAAACACCTTGTCCCACTCGTCAAAAGGCATGTTGGTCGTCAGGATGATTGATCCCGTCTCATAGCGCTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTAGCGTGCCTATGAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTGTAGGGTGCCTATGAGGAATCGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 11 2807043-2806197 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024955.1 Kyrpidia spormannii strain EA-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 2807042 36 100.0 39 .................................... GTTGAGACGGATGGTGAACGGTGCAAGCTTGTGGACTAT 2806967 36 100.0 37 .................................... GATTCGACACAAAAGACACATCATTTCCCCATCTCAG 2806894 36 100.0 38 .................................... GTTCTTGGAGCGATTGGGAACGGTCTCGAATTTGGATC 2806820 36 100.0 39 .................................... GGCCCACTTTCGGAACGATGTTCGTTGGCGATCACCCCC 2806745 36 100.0 36 .................................... GGCGGTAACACTGGTAACTCTGATACACAGATACTC 2806673 36 100.0 38 .................................... GTACTTCGGCTGTTCCATCATGGCCGGATGCGTGACGT 2806599 36 100.0 38 .................................... CCTTTCAGCCTCCGTTGCAGCTCGTTGATTGCCTCGAT 2806525 36 100.0 39 .................................... CAGCGCGAAGTACAGCATTCCAACGAAAGCCACAAGCTC 2806450 36 97.2 39 ......................T............. CACGTATAATACCGAAATTAGGCTGCCATTGTAAGTCAA 2806375 36 100.0 36 .................................... CAAGTCTACCGTATCGTAGGAGATTGGCAGGAAAAT 2806303 36 100.0 35 .................................... CATCCTCAGATGGAGTTTTTAATCCCCCAGCCGTC 2806232 36 94.4 0 .................................TT. | ========== ====== ====== ====== ==================================== ======================================= ================== 12 36 99.3 38 GTAGATCCGCGGAGTGACTCCGCGGCCCCATTGAAG # Left flank : GTAGCCAATTTAAGGTAGGCCAAATAGCTGGGGCAGTGGTGTCCACCACAGGTGTGAGAGGGCACTCGGGTGTGAGGAGGTTGCAGTGAGGGACCAAGCCTCTTTACTTCTCCGGGCTGTGGGGGAGCCAGTCGGCTTTACACGGCATGGGGGAGTGGTTATGGCGGTATGTCTCGGGGAGTGTAAGGCTGCGGCGAATATGAGCAAGCAGATTTTCAGGGAAATAGTGCTTATGGGAGAAGGGTGAGGAGCCGATTCCGGTGCTGTCACTGGATGGCGCCGGTGTCGGCGGGGGCTGTTTGCGGGCATCTCTGGTTGCTTGCGCGAACCTGTAGTGATGGGGGATTTCCCAGGGGGTTCGCGATCCGGATTTTTTGCTGGTGTGGCGGGGAAAAAGGGAAAGAGGTGTGAGATGGAATGCCTTCGCGGAGTACCATGCAACTGAGGTTCGCGAAAAAGACCATTGAAATCCGCACCACACAAGGTATAATAAGCGAGGA # Right flank : CCTCGGTGGTCGGTCCTTCGGCGAGCCCCTCAGTGTGAACATCTGTGGAACAATGCCATGATCATTTAAAGCCTTCCATGTTTTGATGAGGCTTTATTAAGCCCCGGCGGTTTCCTCGGTCAACAACGCAAACTTCTTGTTTGAAATCATCAGCCGCACGTCTAACCCGTCGAAATTCTGTTCACAATGATAGATAACGTGAAGATATTTCGATGTCCTTGTGAGAACGACGGGCGGAGGGTGGAGCATGAGCGATCCCGGCGATTCGACGGTGGGGCGGGAAGAGATCGAGTGGGCGGATGAGGATTGGGTTCCCCTGTCTGCGATTCAACATTACAGCTATTGTCCGCGGCAGTATGCGTTGATCCATATCGAGCAGGCGTGGGCGGAGAATATTTATACGGCCAAGGGGAGATGGGTGCACGAGCGGGTTGATGAAGAAGGGGCGCAATCCCAAGACGGTATACGGGTGTTGACGGGTCTGGCCGTGTGGTCCGATC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGATCCGCGGAGTGACTCCGCGGCCCCATTGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-15.20,-14.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 12 2819707-2819085 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024955.1 Kyrpidia spormannii strain EA-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 2819706 37 100.0 36 ..................................... GGCACGAAAACCGCCCAACCACACACCGGACACCGA 2819633 37 100.0 39 ..................................... TTGGATCGCTATGCACGGTCTGAAGACGAGTACTTGCAA 2819557 37 100.0 35 ..................................... ATCCGCCATAGGCCATCACATCCTCCATTTGCTCG 2819485 37 100.0 35 ..................................... ATCCGCCATAGGCCATCACATCCTCCATTTGCTCG 2819413 37 100.0 34 ..................................... GTCGGTCTCTTCGATGCCGTGCAGCCGAAGGATG 2819342 37 100.0 37 ..................................... TACGCGGTTCCAAGGTTCCGATGCTTCCCGATACGAA 2819268 37 100.0 39 ..................................... AACAAATCCTCGCCCGTGATGACGTTCCGCCCAACGTTG 2819192 37 100.0 34 ..................................... TCAAGTGCGTCCTCGCCTTCGTCAGTATCTTTGA 2819121 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 9 37 100.0 36 GTAGATCCGCGGAATGACTCCGCGGCCCCATTGAAGC # Left flank : GCATCGCATGTTGGGGTAGGTTAAATCATTGGGGCAATGGCTTCCCAACAGGTGGTACAAGGCATTGTTGTCTGGAGAGTTCTCGATAAGTGACCGAATACCTGGTCTTTTCTGAATTAAAGTAGATCCAACGGTGTGTAAATGGAATATATGTTTTATTTTACTTATAAGGGAGAACTATGATGTCCGGACGAATATGGGGAAGCGAAATTTGGGCAATGGGAAAAAGTACGGGGGAAGGCTTGAAGAGGCACATTTCTGGTGTTATAGGTGGATGGTGCAGGTCGCGACGGGGAGTTGTTCGAAGGGCCTGTAGTCCGTGCGCGAACCTGTAGTGACGGGGAATTTCCCGGGATGTTCGCGATCTGGATTTTTTGCCGGTTTGTCGGGAAAAGGAAGAAAGGGATATCAGACGCAAGTGCCTCGAGAGGCGCAATGCAGTCCAGGTTCGCGAAATAGGCCATTGAAATCCGCATCACACAAGGTATAATAAGCGAAGA # Right flank : CTCTATCCGGCTGCCCCGAGTGCCATGCAGGCTGAGCCCACCGGCAGATTCCTGGTCACCACAGACCGTGTATCGCCCGCCCTGAGTCAAAATGACACTGCCGATCGTTCCTCTACCACCCGCGCACGCGACAACTTTCACGTCCATATGTGGAAGGTACCATGGTATAATGAATCCGTCTTGACGGTCCAAGCCCTGTAAGACCGACACGAATCAAGGCGGTGGGTGCATGTCTGCGTCTCAAACCGTTCGATTCGCAAGCCGACTCTTTGACTTGGTGAACCTGATCGTCACAAACCCCAAGCTGTACACAGCTCCTCGTCTGGCGGAACATTTTCATGTGTCCGTCCGAACAATCAGACGGGACATTCGCCTCATCGAAGACCTCGGCATCCGCGTCGAGTCGGAGCCGGGGGGAGGGTATTTTATCATGCGGGATTTGCAGCGAATCCCGGGGATTTTGACCGAAGATGAGCGAGCGGTTTTGGATATCATGCCCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGATCCGCGGAATGACTCCGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.30,-12.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA //