Array 1 46333-44977 **** Predicted by CRISPRDetect 2.4 *** >NZ_NWWY01000008.1 Neisseria meningitidis strain INS-Nm1137 NODE_8_length_68999_cov_71.1693, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 46332 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 46266 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 46200 36 100.0 30 .................................... AGGGGTCGTGAATGGAGTTCTTGCAGTTCG 46134 36 100.0 30 .................................... TAAGCGTTTCTTTTTTGGTCTGCTTCTGCT 46068 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 46002 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 45936 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 45870 36 100.0 30 .................................... ACACAATCTCCGCCGTTCCAATCAAATGTG 45804 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 45738 36 100.0 30 .................................... AATGATGTATATAAAATGCCGTAAAAAATG 45672 36 100.0 30 .................................... CGTCTGAAGGTTTGCCCATCTCCTGACAGG 45606 36 100.0 30 .................................... TCGATTGTCTATGAAAGCACTTGATGATTT 45540 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 45474 36 100.0 30 .................................... GCCTGCGTACTTGGTACGCTGGTCGCCTCC 45408 36 100.0 30 .................................... TTCATAGATCGATGCATGAGGTTTTCATGG 45342 36 100.0 30 .................................... AGGTCAAAGTGTCAGGCAAATTTAAAGGTG 45276 36 100.0 30 .................................... AAATCCATTTATCGCCCACCCTTTCCGGCC 45210 36 100.0 30 .................................... TGCTGAAATTATGGCAAGTATGGGGCAAAG 45144 36 100.0 30 .................................... TAGCAAACAAGGAATATTCAAAGTCCTTTA 45078 36 100.0 30 .................................... CGGCAATGCGGCGGCTGTGTTGGTTGGCGA 45012 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 99.6 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //