Array 1 1027269-1026307 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT907933.1 Latilactobacillus sakei strain J112 chromosome LSAJ112, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1027268 36 91.7 30 A.C.....G........................... AAACCACTTTGTAAAATCTTCTTGAACCGT 1027202 36 97.2 30 .........A.......................... TGCGAAAGGCGGCGAGATTAATCCTGAACA 1027136 36 100.0 30 .................................... ACCCAACGTCGCCAGTTAAATGATAGTAGG 1027070 36 100.0 30 .................................... TAACCTTGTAACCAGCGTTATTCTGTAAAC 1027004 36 100.0 30 .................................... TAGCGGTGAGAAAATAACAATTAATTCTGT 1026938 36 100.0 30 .................................... TGTTCACCGGTTTAAAAAATCCCATTTAAT 1026872 36 100.0 30 .................................... TACTGATCTAGAATCTGCCAATAAATTAGC 1026806 36 100.0 30 .................................... CCAATCCTTTAAGGCGTGAAATAGTATTCT 1026740 36 100.0 30 .................................... TGTCGTTGTCCCAGATTGTAATAACTTCTT 1026674 36 100.0 30 .................................... CGTGCAGTTTATTATCATATTCGACAATTG 1026608 36 100.0 30 .................................... ATAGTTGCGTTCGCTAGACTTATAGGCCTT 1026542 36 100.0 30 .................................... AATGGAATAGTTTAATTTGGGATGATAAAA 1026476 36 100.0 30 .................................... CTAAAACGGCAGTGGTTAACAATGGTTTGT 1026410 36 100.0 30 .................................... CATTATCGAGATTTTAACAAAGATATTAAA 1026344 36 86.1 0 ............................C...TCCT | GT [1026313] ========== ====== ====== ====== ==================================== ============================== ================== 15 36 98.3 30 GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC # Left flank : AGCAGCCCGCATAAATTCAGCGTTTGTAACCCCTTGAATTTCAGATGGATATTGCATCGCTAAGAACAAGCCAGCGCGCGCCCGTTCATCAACTGGCATTTCAAGAATATTTTGACCGTCTAATTTAATTTCACCTTGAAGCACTTCGTATTTAGGATTACCCATGATGGTTTCTGAAAGGGTTGATTTCCCGGTCCCATTTGGTCCCATGATGGCGTGAATCTCACCCGTATTCATTTCTAAGTTAACACCTTTTAAAATTTCTTTACCGTCAATTCCGACGTGTAAATCGATAATTTCTAATTTAGACATTACTGACCCTCCAAAAATCGCATTATAGCACGTTGTTGCTGACTTAATTCTAAGCTAAATGAGAACGCTTTTCAATAGTCGAATCGTGAAATATCAATCAAGGATATGCATTAAATCTAATAAAAAAGAGTACCCCTTTAAAGGTACTCCCCAAACTTAAATTAAAAGAATTTACGATTATTAGCGTG # Right flank : AGTATTTGGTACATAAATTTCTGAACAGTTGTGCCATAATTAATAAAACAAGATAGGAGCATTCCAATGAAACGATATCAAGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCGACATTTGTCGTCTTCGTTAATGACATTAATCTATTACATTTCTCATACCAACGTTTCTTGAAGAATCAACTACGCAAAACGTTTGACTTTACCGGTACACCAATTCATTTGATCCCTCGTCAACGGAAATAAACAAATTTCGAAGTTGATAAGCTAATATGATTAACTAAATTGGAAAGAAAGCCCTTTTTTTAGCGAAAATCCTTGCTATCACTAGGTTTGTGTGATAAATTTAAAAATGAAATGGTGATCAACTCATTGTTTCGTCATTTTTGACCACTCAAAAATGATTTCGGTATTTATTACTGAT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //