Array 1 452327-453026 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010519.1 Streptomyces albus strain DSM 41398 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 452327 29 100.0 32 ............................. ACGACGCGGACGGCATCGGCACCCTGGAGTGG 452388 29 100.0 32 ............................. GCCGAACGGAAGCGTTGCTCGTGACGAGAGTA 452449 29 100.0 32 ............................. GTGTTCGGTCTCCTCCCGAGCAGCTTCGGCAC 452510 29 100.0 32 ............................. TTGAAGGTTGGCGTACGAGTGGTTGTCCCCTC 452571 29 100.0 32 ............................. GACTCCATGTCGGGGCCGTCCTCGCCGTCGCT 452632 29 100.0 32 ............................. GCGGCGCGCAGGAGGCGGTCTGCCTCGGTGGT 452693 29 100.0 32 ............................. GAGCCCAAGGGCGGCAAGGGCAAGATCCGCAA 452754 29 96.6 32 ............T................ AGCTGCGGCCACCCGAGCCCTACGGCGGTGAT 452815 29 96.6 32 ............T................ CCCAAGAACGCCGATGCGAGCGCGACCACCAC 452876 29 96.6 32 ............T................ TTCTGCCAGTGGGGGTGGAGCGTGAGGCGTGC 452937 29 100.0 32 ............................. GAGGGGCTGCGGCACGGCATGCTTTCGGTGGG 452998 29 89.7 0 .....................AC.....C | ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.3 32 GTTTTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : GCGGCCCCTTGCCCGAACCGCCGTCCTCCCGGCCGGTGTTGGAGCCGCAGGCGGTCAGCAGGCCGAGGGCCGTACCGGTGGCGAGCATCCTTCTGCGGCTGATGGTCATGAGCTGATCCCCCTGCGCTGATCTTCGATTGCTGCGGTGTCGGGCCCAACGATCAACCATGCAAGCGGATTACGACAGGGGTATTGCGGCCGCATGTCACCCCACCTGGGGAGCGGGCTCGGGGCGATGCCCGGGATGCCGCCGCTTTGCCGTTCCTGTCCCCCGACCGCGAGCCTGCCGCCCATCGTCCACGCGAACAGGCCGCGACAACCACCGAGCAACTGCACACCCCTGCCGACGCGCCCCGGCAGCGCAAGCCGATCGGATCATTCCCGCTCCCGGAAGGGCTGCCTCACCTACAGTGCAGACCGTGCGTACTGGTCACCCGCTGCCCGGCATCACGCCTGGCAATGAAATGGCAAAGCCCCTCTGACGTTGCAGGTCAGGAAGT # Right flank : CCACCCCCTCAGGCTCGGCGATGGCATGCCCGCCGGGAAGAGCCGGGCGCTGAACGGCGTACGAGGCCACCCACGGAAAGGTGCGCCCCTCTCCCCCGCCATTGCCCCGTTCGGGTGGTTGATCAGCGGACTTGAGCCGTGGGCCGAGTGCCCCCGCATGCCCCCGCCGACTCGGGGCACTCGTCGGTGACGTCCCCGAGTGGGACCCGGATGAGAGCCGAAACGAGAGCCGAGTGGGAAGAGAGGTAGCCCTGTGTCGCAGGTCGAGGAGTCCATCGAGGTCGGTGTCCCGGTCAGTGCCGCCTACAACCAGTGGACCCAGTTCGAGGACTTTCCCAAGTTCATGGACGGCGTCGAACGGATCGAGCAGCGCACTCCGACCCTGACCCACTGGAAGACCAGGATCGCCGGTGTCGAGCGGGAGTTCGACGCGGAGGTCACCGAGCAGATCCCCGACGAGCGGGTCGCGTGGACCAGCGTCGGCGGCGAGGCCCGGCAGG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : GTTTTCTCCGCGTGAGCGGAGGTGAGCCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 4057100-4056765 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010519.1 Streptomyces albus strain DSM 41398 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 4057099 28 92.9 33 ............CG.............. CCTGGGCGACCTGGGGACAGGACTCGGACAAGA 4057038 28 100.0 33 ............................ CCTGCGCCCACTGCGCATCGGAGAGCACGGGGT 4056977 28 100.0 33 ............................ TTGGGCCGGGAGATGGGGACGCAACCGGTCGGT 4056916 28 100.0 33 ............................ CTCGCCCCGGCTCGGGGACTGTCCGTCCACCCC 4056855 28 85.7 34 ..........T.CG...........C.. CTGGGACTGCGTGATGGAGGTTCCTGACCACCTG 4056793 28 67.9 0 ............CCCC.CC...AC.C.. | C [4056769] ========== ====== ====== ====== ============================ ================================== ================== 6 28 91.1 33 CTGCTCCCCGCGTATGCGGGGATGGTCC # Left flank : GTGGGAGGCGCGGTTCGTCGCTCAACTCGCTGCGCCCTCCGCCGAACTGATGGGCACCGGTTCCGGCGTCATCCTCCGCGACGTCGCCACCGGATCCCAGGCGTGGACCGAGCCGAAAGGCGCCGGGTGGATCGCGCACCAGCACGGACCACTCCGCCTCTGGGACCAGGTCGAAGACGCGCTCCTGGAATGGCAGAGGGCCGGAGCAGCCGACCTCACGGAGTTCGGCATGACAGCGACTCCCGAGTCCCAGACCGTGTGGATCGGCTCACCGCGGGGCCCCAGTTGGCAGCTTCCCGTCTGAGTCCACGGGTACTGTCCACCCTGTCGCTGCATCGGCGTCCGAACCCACTCATCGGTCGGGACGCTCTTCCAGGGGGCTGAAGCTCATGAAGGGACGCTCGGCGCCGGATGAGGGGTGAGTTTTGTCGGGTATACCGGTCTCGGTGAAAGCTGCTGACAGCGAGGGGGGAGCGGACTAAACGTCCAGGTCAGCTAGT # Right flank : CGACACCCGCCCCGGCGTCACCACTCCACCAGCACCGCCGCCCACGCCCTTCACGGTCGGTCGCCTCGTTGGCCAAAGCAGCCCGCTCAGCCCCCCAGCACCGCCCCCAGCACCCCCACCACTTCCCGCGCCCGCTCCTCCGGCAGGTTCAGTGGAGGGGCCAGCCGCAGGGTTGCCGGGCCGATGGTGTTGAGCAGGAGGCCGGCTTCCTGGGCGGTCGACTGGACTGCGGCGGCTGTCGGTTCGGTGAGTTCGATTGCCAACAGCAGTCCTGTGCCCCGGACTTCGCGTACCAGCGGATGCCGGGGCCCCTCGATGCCCTCCCGCAACACGGCACCCACCCGCCGCACTTGAGGAAGCAGCCCCTCGTTCTCGATGGTGTCCAGTACGGCGAGGGCGGCCGCGCACGACACCGGGTTGCCGCCGAAGGTGGAGCCGTGCTGGCCGGGGCCGAGGAGGCGGGCGGCTGCGCCGAAGGCGAGGGTGGCGCCGAGGGGGAG # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGTATGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGATGGTCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 4331191-4330368 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010519.1 Streptomyces albus strain DSM 41398 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4331190 29 100.0 32 ............................. CGAGCGCCCGGCCTCGACCTGCTCGCGCTCGT 4331129 29 100.0 32 ............................. ACGACCTGTCAGGTCGGATCCTCGCCCTCGAG 4331068 29 100.0 32 ............................. TCCTCCAAAACGGGCCAGAAACCCATCAGTGC 4331007 29 100.0 32 ............................. CGCCCTTGTCCGAGACCTGGTTGACGGCCGTC 4330946 29 100.0 32 ............................. GCGCAGCTCGGCGCGGCCCGCCGGGAGGTGCG 4330885 29 100.0 32 ............................. TACCGCCCGGCACGGGGCGGCATCGCGGCCAC 4330824 29 100.0 32 ............................. AGTTAGGTACTCAACATGGAATTGCCATGGTC 4330763 29 100.0 32 ............................. ATCTGCGAGGGCCGGGCGAAGGACGATGGCCT 4330702 29 100.0 32 ............................. TCGCGGCGGCAGACGGGGCAGCGGGTGTCAGT 4330641 29 100.0 32 ............................. GGCTCATCCACCACGATGGGCACCGGGCAGTA 4330580 29 100.0 32 ............................. CGGGTGTTCGTCGTGATCGTCGGGCATGCCCG 4330519 29 100.0 32 ............................. ATCATGGTGAGATCGAGGGGCGGACCGGGGAT 4330458 29 93.1 33 ...G........T................ GGCCGTCGCGCGAGGCCGCCTGAGCGCGGGACA 4330396 29 82.8 0 ...TT.......TC............T.. | ========== ====== ====== ====== ============================= ================================= ================== 14 29 98.3 32 GTGCGCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CGCGGATCGTCCACGACATCCAGGACCTCCTGGACCCCGGCAGCAACCGCGAGGCCCCCGACCCGGAAGAAGAACTCGTCGACCTCTGGGACCCCGTCACCGGAGCTGTCCCCGGCGGCATAAACCACGCCGCCGACGGCTGAAGCCCCCTCCCGGGAAGGACCTGCCCCATGGCCTCCATGATCGTCATCTCGGCGACCGCCGTCCCCGACCACCTCAGAGGCGCCCTCACCCGCTGGCTCCTCGAAGTCACGCCCGAGCTCTACGTCGGCACCGTCTCCGCCCGGGTACGCGACGAACTCTGGCAGTCGGTCACCGCCTGCGCGGACCAGGGCACCGCGGTCCTCGCCTACCCCACCGACAACGAACAGGGCTTCGAACTCCGCACCGCGGGCCCACAACGCCGTACCCCCGTCGACTTCGACGGCCTGACCTTGATCGCCTTCGACCGACCGAGTCAAGAAATGGCAATGCCCCTCTGACGGCGCAGGTCAGGAAGG # Right flank : GGTCAGTCAGTGCCGTCTCGGTCAGGTCATCCGTTCTCTCTGCGGAAGCGGAGGTCATTGCCTGGGGGGCGTGTCTTCGGGAGCGAGTACGTCGGTTCTGCTCGTGGCCGGTCGAGCCGCGAGGACTTCTCGACGGCATCCGCCCGGCGGTCTCGCCACCCAGAAGCGCAGCAGTTTCTCCCGAGATTCTCCCAAACGATCTTTACCGGGGGTCGTTCACCGGTCTGGACTGGGGTGTTGGGCTTCCAAGTGACGGACGGCCATTGCTGGTAAGGATGAGGCCACAGGTTCACATCCTGTTGGAACCGCCAGTACGAAGACCCCCAGCCGATCATGGTTGGGGGTCTTTGGTATCTCGGGCCGAGATGAGGCAGCCGTCCGTGTCCGGGGCGTTCGGGTTGGCGTGTTGCTGTGCTTCAGGGGCGGAGGGCGTGCATTCCATGGGCTGGTTTTCCGGTACGGCGCGTCAGGAAAACCGTTGGAGGCGCGGCCGCCCCCGG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 4340969-4341119 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010519.1 Streptomyces albus strain DSM 41398 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4340969 29 100.0 32 ............................. CGGAGAGCCCGACCGAGGGCGGTCGGGGGCTC 4341030 29 100.0 32 ............................. GTCGCCTTACTGCTGGCCTTCACCGGAGCCCT 4341091 29 96.6 0 ......C...................... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CGCTACATGCGCGTACTCGGGCTGCCCACCCACCACCTCGAACAAGGCGGGCACCTGCGCCTGAAAAGCAGGCGAGATCTTCCCCAGATCGTGCAACCCCGCCCAGAACGAGAGCACCGCCCGGCACTCCCGCCCCGACAGCCCCAACTGCCCGGCAAACCGCTCCCGGACCCGCCCCTCCAGCAACTCGTCCCAGAGCACACCGAACGTCGCCGCCACATCCAGCAGGTGACACATCACGGGGTAAGGCTCAACCAGCCCGTGCTCCTTGCCCCACAGCCGCCCGTCCGACAACACCACTGCCTGCGACGCATCTTGACTGTCAGTCATGACGCATGTCCTACCAGCCCGCACCGACAACGCGAGCCGATCAGGCCATTCCCTCCTGCCGCAGGGCCACGCCGCCTACAGTGCGCACCATGCGTACCGCCTACTCCCTGCCCCGCACTTCACCTGGCAATGAAATGGCAAAGCCCGTCTGACGCCGCAGGTCAGGAAGT # Right flank : GCCGCCCGTCCCTACGGTCGGTGGACGGATCCTGTGGAGCCGTCCGGCCCTCGACGAGCACGGCCCGCACACGCAGGTGGGCGTATACCGGGTCGTCCGCGAAGAACGCCGCACCGACCCGGGCCCGGGCGGGGAGTACATCCTGCTGGACCTGGAGTTCCTCCCCGACATCAGCCGCGAGCCAGAAGCTGCCGGGAGCCCGGCGCCCTGAGCCTCCGCCTGCTCGTACGGGGCGTTGTCAGGATGTGCCGATGGCGGGCCGGTCGGTGTCGGGGCAGTCGGCGGCGTAGCGGCAGGGGGAGGTCTTGGACGGGCAGCCACTCGGGTCCTGGTCGTCCTTGGAGCCGTTCGTTGTCAGGGTGACGGCGACGAGGGTGGTCTGCGGGGAGAGGTCATTGGTCCCGGTCAGTCGATGCCTTCGACGATACGGAAGTAGCGCTCGACGCCGTCGTCGAGGGCGGCCAGCGCCTGCTGGTAGTCCGCGCTCTCGCGCGCCGCGA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //