Array 1 334660-335216 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069240.1 Cutibacterium avidum strain KCTC 5339 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 334660 36 100.0 37 .................................... TGGTCCATAGTGCAAGGTCGAGTAGGGGGGAACGGTG 334733 36 100.0 38 .................................... TTGCCGCCATGACGCCACTCGGCCCAGTGATTCCTCGA 334807 36 100.0 39 .................................... CGGTGCACTCAGGTCCGCTCCACCGGCACCGGCGGGTCG 334882 36 100.0 38 .................................... CCAGCGCCACGCCCATCCAGATGTTCAGGAACGGCATG 334956 36 100.0 39 .................................... TGTTCGTGGGCGGGCTCCTCGGCGACGCGCTTGACTCCC 335031 36 100.0 38 .................................... TCTCTCGTCCCTCCCCCCGGTGTGCGCAGCCACAGGGG 335105 36 100.0 40 .................................... CTACGCCACACTCGCACGGTGTCGGCGCCGACAAACGGTG 335181 36 94.4 0 .................................TC. | ========== ====== ====== ====== ==================================== ======================================== ================== 8 36 99.3 39 GCCTCGGCTTAACTGCCGAGGCAACTTCGTTGAGGC # Left flank : ATCGCGGGGTGACGGTGAGATGAGTCGCCAACCTGACGAGATGGCATATCTCATTGCTTACGACATAGTGGATGATCGCCGTCGCGACATGGTTGCGAAGGTGCTTGGAGGTTATGGCAACCGTGTTCAGTACAGCGTTTTCATTGTGGTGTGTACCAAGGCTGCGCTTCTTCGGCTCCGCCGGAAGCTGACGGGGGTCATTGATTGTGAGGAGGACTCGATACTTGTAGCGCTGTTGGGGCCTGATGGAGGGGCGGACCTCTCAGTGGATTGGATAGGTCGGAGCCGAAGAGTGTTTGACGATGCTCCGGTCATCGTCTGATGCGAGAGGGTCTTGAAACACGGAATCATGTTGACCGCTCGCAGCTGCGAAGCTGGTTCTCAGAGACGGTTTGACCGAGATTTCTCGGTCTGGATCTTGATAACTACGTGTTCCTGGCGCGGGCCCCTCGCGAAGGGTTGATATTCTTCCTAATGAGAGGCGCTTGGATCGCCACGCT # Right flank : CTGGTCCGAGGTCGTTGAACCTTCCCGGTCGCCTCGATAACCCCCACCCGATCGACCCACCCAACCCCTTACACTTTCAGCGTGATATTTGTGGACCCCGCGAACACCAATCCGCATCCTGCCCGCACCCTCGTCATGGGTGTCGTCAACGTCACCCCCAACTCCTTCTCCGACGGAGGCATGTGGGCAGACCCCGAGGTGGCCATCCGCCACGCGCGTGACCTCGTCGCCCAAGGAGCCAACATCATCGACGTCGGCGGCGAGTCGACCCGACCGGGCACCGAACGCACCCCCGAGGACGAGGAACTGCGTCGCGTCATGCCCGTCGTCAAGGCCCTCGTGTCTGACGGGGTCACCGTATCCGTCGACACCATGCGTGCCTCCGTCGCCAAGGCGGTCGTCGAGGCCGGAGCGACGATCGTCAACGATGTTTCCGGGGGCAAGGCCGAACCGCAAGTCCTCAACGTTGTCGCCGATTCTGGCGTCGACTACGTCCTCAT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCGGCTTAACTGCCGAGGCAACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 2327100-2328715 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069240.1 Cutibacterium avidum strain KCTC 5339 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2327100 29 100.0 32 ............................. ACTCTCCATTCCCTCGTCACGTTGCTGAGCCA 2327161 29 96.6 32 ............................T TGATGATAGTGCCAGCAACAGTTCTGATTCGT 2327222 29 100.0 32 ............................. GTTGCATTCCTTAAGCCGCCAATAAGTGAAAT 2327283 29 100.0 32 ............................. ACATGAAAAAGGGCCACTTGACTAGGCATAAC 2327344 29 100.0 32 ............................. ACATGAAAAAGGGCCACTTGACTAGGCATAAC 2327405 29 96.6 32 ............................T GTTCGGCGCAGTCCTCGAGTCCCGACGACTCG 2327466 29 100.0 32 ............................. TCCGAGCCGCACTCAACCACGGCGCAAACCCG 2327527 29 100.0 32 ............................. GCGCTCTCCTGTTCACCATCCTCGCCGGATTC 2327588 29 96.6 32 ............................T TCACGCCGCGATCCCCGAGGCCCTGGTCGAGT 2327649 29 100.0 32 ............................. AACGCCGAGGTCATTGGCCCGGTCGACTCCCT 2327710 29 100.0 32 ............................. CTGAATGGAGAGCGAGCATGAGCACCACCCCT 2327771 29 100.0 32 ............................. GTCGCGGCCTTCCTTGAACAGGGAGGTGTGCG 2327832 29 96.6 32 ............................T TCGAGCGTGACCTCATCGCTGAACGAACCCGT 2327893 29 96.6 32 ............................T CGCCCCGACCATGCGGGCGTGAGCAGCAGAGG 2327954 29 96.6 32 ............................T CCTCCCCGGTGGGTGTCTGCCCAGATGCGGGA 2328015 29 100.0 32 ............................. GGCGCTATCCGGTATATGCCTGATGAGGAGAT 2328076 29 96.6 33 ............................C CGACTAGAGGGCGCATGGGGTATGACGATCCAC 2328138 29 96.6 32 ............................T CAAACCCTTGTTGATCGGGATGTCGATAACCC 2328199 29 96.6 32 ............................T TGCCCATCGTGAGCCACTGCTTTGTCCCCAAT 2328260 29 100.0 32 ............................. GTGATATCTGGGTATGTGCCGCTGGCTAGGAC 2328321 29 100.0 32 ............................. GCCACCGCCGCCCGCGTCATCGACACCGTCGG 2328382 29 100.0 32 ............................. CGGGGCCAACCTGCGCTGGGCCAGGCTGGGCT 2328443 29 100.0 32 ............................. GACTGATGACATGGCATCCCCAACAATTCACG 2328504 29 100.0 32 ............................. CTGAACCACACACCTCCCTATTCAAGGAAGGC 2328565 29 100.0 32 ............................. GCCGCCATACCAGCACCAGCAAGCCCACCAAC 2328626 29 96.6 32 ............................T ACCCGTGAAAAGGCTGCGGTAATGCTGGGTCA 2328687 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 27 29 98.7 32 GTCTTCCCCGCCTACGCGGGGGTGAGCCG # Left flank : GACGCCCCCGGAGATCCCGATGACGGATACGGGTGGGATGTTGTCGACCTGTGGGACGACCGCACTGGCACGGTCGCCGGCGGAAGATCGTGGGCATAGCCATGGTCGTGCTCGTCCTCACCGCCTGTCCCGCGGGACTGCGTGGCCACCTCACGAGGTGGTTGCTCGAGATCAGCCCTGGGGTGTTCGTCGGGCATCTGCCTGCACGGATCAGGGATGCCCTGTGGAGCCGAGTCGTTGAAATGTGCCACGACGGGCGGGCGATCCTCGTGTACTCGATGCGCGGCGAGCAGCATTTCGAGTTCCGCGTGCATCGACATGACTGGGACGTCGTCGACTTCGACGGGCTGAAACTCATGCAGAGGCCAAACAATAGGGCACACAACTCGACACTGCGGCCGGGATGGAGCTCGGCTGCGCGGCGACGTAGGACGGCCAAGCGCTAGATCGAGTACACTTGTATCTGGGCAAAGCTCCTGCATCAACCGTAGTCGGCTGGT # Right flank : GGAGGTCAGCATGGCTGACCTTGTTATCCAGGCGTTGCAGTTGGCGACAGCGGTCGTCAACCTCGCAGCCGCCGTGATTGCGGTGCGCAAGCTCCGCAAAGAAAGCCGCCCCCGAGGTGCAACTCGGAGGCGGCGAGGTGGCAAACGCCGGTAAACAACGGGGACCCGGTTCCACAGAGGGGCCGGGTCCCCTCCTTCCACGAAGTATACCTGTCTGCGCGGGCCAGGAGAAGGGGTCGCCGGTACGCCGATGAAGCGCTTAGGTCTCACCACAAGGGCCGTTGATTGAGGTCGTCTTCCCCGCCTACGCGGGGGTGAGCCGGCATCACCGCCTCACAGACCCCCAGCGCGGCCGATGGACCGCAGCCGGAAGCGTCATCATCGACTGGCAAAACCGATCACTGGTCCCCATCGACGGAAACCTTGATGCCGTCATCGACCACTGGGCATGGACTCACGACCCCCAAGCCCACACATCCACCATGATCGACCTTGGCACC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCCTACGCGGGGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCGCCTATGCGGGGGTGAGCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //