Array 1 46409-45588 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANYW01000053.1 Escherichia coli KTE90 acwoK-supercont1.53, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 46408 29 100.0 32 ............................. CAACAAAACGCTGGAAGCCGGAACAGATATCT 46347 29 100.0 32 ............................. CTTATTGAGTTGGCACAGGAATTACATGAGGA 46286 29 100.0 32 ............................. CCGCCGTCGAGTGTAATACCCTGATCCATCGC 46225 29 100.0 32 ............................. CAGGATTGAAATACAGCCTCGGCCTGGGACAG 46164 29 100.0 32 ............................. AGGCGAGGGAGATCAGAGATCAGGCTATTACA 46103 29 100.0 32 ............................. AGATCGGCGGCCAGTGGATAACCGTTATCCCC 46042 29 100.0 32 ............................. GTGTGGTAATTGGTGGTCTGGCTGGTGGTTTA 45981 29 100.0 32 ............................. AGAATCTGGACACTGCATATACCGCAATCCGT 45920 29 100.0 31 ............................. CCGCGCAAATCCAGCGAGCCGCCGACGCTCA 45860 29 100.0 32 ............................. TTGCAAACCGTGGCAAACGCAATTAACAAAAA 45799 29 100.0 32 ............................. ATTGTTATAATTATTTATTGAAATATCATTCC 45738 29 100.0 32 ............................. AATCTATTGTGAATTTGAAATGGTCCAGCACT 45677 29 100.0 32 ............................. GGTAAAAACACGGTCTGAACCGACATTCATGT 45616 29 93.1 0 ...........AT................ | ========== ====== ====== ====== ============================= ================================ ================== 14 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCCGCTGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGTTAGGCGATAGCGGTCATCGAGGACGCGGCGGATGAGTATGATCGTAGTTGTAACGGAAAATGTTCCTCCACGTTTACGTGGACGGCTCGCTATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTCGGAGATACATCCAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCTCAACTGGCAGGTTGCGGAAATGTAGTGATGGCTTGGGCGACCAATACCGAGTCAGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTGGATTTGGATGGGTTGCGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 73418-72108 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANYW01000053.1 Escherichia coli KTE90 acwoK-supercont1.53, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 73417 29 100.0 32 ............................. CCAGGGTGAGCCAGCGCCGCAGGAAGACACGC 73356 29 100.0 32 ............................. CGTTCCCAACGCTGAATATTGCTGGCATAGCC 73295 29 100.0 32 ............................. CCAATACGGAGAACCTTCATCGGTAATGGGGT 73234 29 100.0 32 ............................. GAGCGTAGAGATTCTCGAAACCGATCCGGACG 73173 29 100.0 32 ............................. GAAGTTGCGCGCACTAAGAAAAACAGGTTCGA 73112 29 100.0 32 ............................. CTGAAATCAATCGCCGGTCGTCGCCACGTTAC 73051 29 100.0 32 ............................. AGACGGCGCGTAAAACTCATACGGCGACAAAT 72990 29 100.0 32 ............................. CTCGCGGGCGTGGAATTTAACGAACGGTTACC 72929 29 100.0 32 ............................. TCGGGACGCTGCGCGATCTGCATAGCAACGCA 72868 29 100.0 32 ............................. GTATTTTTGCTGACGGATTCTCAGAGAGTTTC 72807 29 100.0 32 ............................. TTTCTATCTCCCAGTGGGAGAGAGATGACAGT 72746 29 100.0 32 ............................. GTTTTGGCGATATCACCTGATGCCTGCAATCC 72685 29 100.0 32 ............................. GGGTATCGCACTGCGGCAGATGTTCCGGGGCC 72624 29 100.0 32 ............................. CATGAATATGGACGATGAAAAAATAAGAGAGG 72563 29 100.0 32 ............................. TTAAAACATTTTCCGAGCTTTGCGATTTATAT 72502 29 100.0 32 ............................. TAAAAATCATCATGGAAAATCAACCCGGCGAC 72441 29 100.0 32 ............................. AGCGCGCGCGGGCTACTGCACTCGGTGATAAC 72380 29 100.0 32 ............................. GCGATCTCGCGGAATACACCGACGAGGCGGGC 72319 29 100.0 32 ............................. TAAGGCCGTCGCCGGATCAGCCTGGCTATGCC 72258 29 93.1 32 .A.C......................... TTCTTGCGGGTGTTGCAAATATTCTTCACGTA 72197 29 93.1 32 .A.C......................... GACGCCGCCTCCGCGAAGCCGTTTCCGATGTT 72136 29 89.7 0 .A.C........................A | ========== ====== ====== ====== ============================= ================================ ================== 22 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATATTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //