Array 1 31368-28578 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASGL01000071.1 Acinetobacter baumannii TG27395 TG27395_72, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 31367 29 100.0 31 ............................. GTCTTTGCCAAGTATGTTAAAGACCCAGCAC 31307 29 96.6 31 ............................C TATTTATTTAAAAACATTAAACGATTTAATT 31247 29 100.0 31 ............................. ACTGTAGTGGGTCATAAGGAGATTTAGTTAG 31187 29 96.6 31 ............................C AACATATGGAATTGCAGCAACCGATGCATAA 31127 29 96.6 31 ............................T AGTTCATCAAATGAAACTAACGCTTCCCATT 31067 29 100.0 31 ............................. CTCAGGCAATTGTTGGGAAAAGTCGATTTCT 31007 29 96.6 31 ............................T GTTTCAAGGTCTCGGATAATTCCACATTCAT 30947 29 100.0 31 ............................. TATACATCGTTATTGCATTCTGCATATCCCA 30887 29 100.0 31 ............................. TTAAGAGAGGCTTGTTTAGATCAATACTTGC 30827 29 100.0 31 ............................. TAACAGGTCAAGTTACTGTTGACCCGGTAAA 30767 29 100.0 31 ............................. TAACCAAAATGAGAATAAAAAATTCTTTAAA 30707 29 96.6 31 ............................T TCACCTGTAGTAACAGTTGTTAGATAACCCA 30647 29 96.6 31 ............................T CTGGAGTCATGGGGGCTAATTTATTTAAACG 30587 29 96.6 31 ............................T TATCCCTCGATCTGCTGTAACGTGGTGTGAG 30527 29 96.6 31 ............................C CAAGGTGTGCGCACCAAAGCAAAACCAATCT 30467 29 96.6 31 ............................G CCCACAGGTTGAGCATCAACGGCCATCGAGA 30407 29 100.0 31 ............................. TCATAGAGCTCACTTTGTCGTTGAGCCTGCA 30347 29 96.6 31 ............................T TGTAAAACCTCTGGATTAAGCATTGCGTTCA 30287 29 96.6 31 ............................T CTTCCTGAGTTTTAATCCCATTTGCCTTACA 30227 29 96.6 31 ......T...................... AAATGACCATCAATCGACAGTGGTTTACCTT 30167 29 96.6 31 ............................C ATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 30107 29 100.0 31 ............................. GAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 30047 29 100.0 31 ............................. ACACGTTCTCTATATCGCTGTTTGCGGTCAT 29987 29 96.6 31 ............................T TCAGTTGGATATGCCTTTGATACCAAGAAAC 29927 29 96.6 31 ............................T CTCCCCCCTCCTCGATCGGCTGTGAAAGTAC 29867 29 96.6 31 ............................T TTAAATCGTCATATTAAGGCGCAGTTCCGAA 29807 29 100.0 32 ............................. AAGATCTGACCAGCTAAAACATTCTGGTTATC 29746 29 96.6 31 ............................T AGAAGCAGAAAATATCCAACTCATTGCTACT 29686 29 100.0 31 ............................. CATGGGAGCTTTCATTCATATATGTCATTAG 29626 29 100.0 31 ............................. CGTCCACGGTAGCGGCGCCAAGGCTGCCAAT 29566 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 29506 29 89.7 31 ...AC.......................G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 29446 29 89.7 31 ....C.......G...............T TAAATGCTCAACTACTTCTGTAGCTAATGGA 29386 29 86.2 31 ...GC........C..............T CTCAACTCATTGATTTTTTCTTCTCTTGCCA 29326 29 93.1 31 ...GC........................ TTTTTATTCCAAGGGCTTTTGCTTCTTGTGA 29266 29 86.2 31 ...GC......T................T TCAAATGATTTAATGAGCTTGTAGCCATTTT 29206 29 86.2 31 A..GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 29146 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 29086 29 75.9 31 ..CGC.......CC......C.......T TTATAACCACCAGTTAAAGTATTGACTAAAA 29026 29 75.9 31 ...GC.G...A..C.AT............ CAATCGGGGACGTGGTCAAAAAGATTATCAG 28966 29 93.1 31 ....A.......................G TGTTGATGTTGTTGTTCAGATCGTTTTTGGT 28906 29 79.3 31 ...GC....T..TC..............G ACATGCGAGCTTTCATTTAAATGTGTCATCA 28846 29 93.1 31 ....G........C............... TTAAAGCATTTTCATATGAGCCTTCCTCATT 28786 29 82.8 31 ....A......TCC..............T TCGGATCAGTCCAGTCATCATTCTCGTCAAT 28726 29 86.2 31 T..G........G...............T ATTATTGCGCGACAGAACGTATCAATTAATG 28666 29 89.7 30 ...GC.......................C AAGCTGATGCTTCCTTATGGTTACAGTCAG 28607 29 82.8 0 .G..G...................AT..T | C [28602] ========== ====== ====== ====== ============================= ================================ ================== 47 29 93.9 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACCCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTCGACCTCGCTGATCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTTCGAATGCAACTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGATATATGTAGTAAAATCAAATAAAATCATATATTTAATCTAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTGAATCTTAAAAGAAAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATTTTGGTGATGGCGTCAATTGAACAAATATAATAATATACTGATTTATCTTAATTAATTTTTATAAAAAAATCCCAGTGTACATGACAGTGTACAAATTATATGTTGCTGGCCTATTTCCTTCGGGTTTGGTTGCTATATACGGAGTACAACTCATGTATTAAACACCTTACTGGCAATCCAGTAACACTACCCTACTCCACCACTTACACAGCATCACTTCGACATCTCGTCAACGCAATTTTGCGTTCGGCATTGTTTTCAAAAGTTTATCCAGAATTAGACGCACCTAAAACCCGATAAAACCCTATCAACTCTTATCATTAGCTCTTAATAAAACGTAGTCTTTTATCCAGGTAGCTACTACGAATTTCTCGTAGTAAGGCACTGTATTTGAAACATGGAAATGAGATTCCTTAAATTAGCGATAAACCTTGTTGTATATAGC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.35, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [56-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 36458-37979 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASGL01000071.1 Acinetobacter baumannii TG27395 TG27395_72, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 36458 28 100.0 32 ............................ TAACGTGGTGTGAGCCGAGAACCTGCAAGCCA 36518 28 100.0 32 ............................ TTTTGATGAGCAGGTATTTACACAATATAAAT 36578 28 100.0 32 ............................ TGATCAAGAATGATATGTACTAGCTCACTATC 36638 28 100.0 32 ............................ TTCGAGTCATAATTATAGTAAAAAGTCATCTT 36698 28 100.0 32 ............................ TACATAAAAATGCGGACCCAACGATAAGGATT 36758 28 100.0 32 ............................ ATTAATCGAGGAAAAAAAACATGAATGTTAAT 36818 28 100.0 32 ............................ ATCACTTAACCCATCATCAATAAGTTGGCCTT 36878 28 100.0 32 ............................ AGTCACCATTGTTCGAAGCTGTTGGGTCATTA 36938 28 100.0 32 ............................ TTGTTGCATCATTTGCGACTCATGACTATTTG 36998 28 100.0 32 ............................ AAATACAAAGTTAGGTATTGGTACTGGTGAAA 37058 28 100.0 32 ............................ AATATCCACCAATGATTTTGGTAAAGATAGAG 37118 28 100.0 32 ............................ AGACACATACGTAATGGTGTCAATATCGTATA 37178 28 100.0 32 ............................ TGCCCCAGCGAGCAAACGCCTTAAAAATCCTG 37238 28 100.0 32 ............................ GAGATTTTTGTGCGCTTATAGAACATGAGCTT 37298 28 100.0 32 ............................ GTAGGGATAGTGAGATTGTAGACCTTACAATG 37358 28 100.0 32 ............................ CCGCAGATTTACGGATGCCTGTAACTGTCATG 37418 28 96.4 32 ...A........................ TATCATGAACATTGTTCCTTGACCCACGGGCA 37478 28 92.9 32 ...A.....T.................. ATTCGATAGACTGATTCTATAAGCTTATTTGC 37538 28 100.0 32 ............................ TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 37598 28 82.1 27 ....C......TCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 37653 28 92.9 32 ....C....T.................. AAACAACGAGCCTTGTCGCGGGTCGCCCATGT 37713 28 96.4 32 ...A........................ CAAATCAAAAGTGCAGTTGCTGCCTCAATAAC 37773 28 96.4 32 ...A........................ TCTTCATCTGTTACATATGAAGCAAGGATCTT 37833 28 92.9 32 ...A.......T................ GTCAAACGACAGGGCTATAAACACTTAATCTT 37893 28 96.4 31 ...A........................ ACATTCAAAGAGGCTCATCGAATCCAATCGA 37952 27 78.6 0 A..T........TC........C.-... | A [37956] ========== ====== ====== ====== ============================ ================================ ================== 26 28 97.1 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCCTCATTTAATAAAGTTCGAGCACTAAGATAGGGTAAATCAAGTGCTTGCTGTTTACTTAAACGAATCCCGCCTTTTTCAATATTGGAGTTAATCGTCTTTAAACTAAAGTGTACTGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : ATTTCTCTTTCGAAATTTAAAACGACATGTTTTGTCGTTAAAAGGCCGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAATATTATATTTTTATTACATTCGAACTTTAACAATAAACTATGCATGTCATTCTCATCTCTGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATTGTGGATAGCTATGCTATTCGTACAGGACATTCATCTTGGCAAGCACCAATGACAATGGAAGGTTTAAAAGAAATTCGTAGCGCATTAAAAAAAGTAGCCACCCGACAAACTGCGGTAGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTAGGAGCAAAGCATAAATTTGCAAACGATGGTGCATATCCAGTTGCATCGACCAAAAAACAACAAAAACTACTAATGCTAGATGAATGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGGGACATGCATGATATCGGTAAGGCC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //