Array 1 18191-16965 **** Predicted by CRISPRDetect 2.4 *** >NZ_APUZ01000114.1 Neisseria meningitidis NM27 gnm27.contig.115_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 18190 36 100.0 30 .................................... CCGCAAAGCAGCCGAAAAAGCCGACAGGAA 18124 36 100.0 30 .................................... CATGCCGTCGGGCGGTGTTGTAAATTTTAA 18058 36 100.0 32 .................................... TGACGGCGGTGGAAACGGTTTTCATAAAATTT 17990 36 100.0 30 .................................... GCCTCACAAATATCGTCAATGCTTGCGCGA 17924 36 100.0 30 .................................... TGCCACTTGATGTTTTAGCCATAGTGTTCT 17858 36 100.0 30 .................................... TGCGAAGCGAACACCCTGAACAATGCCGAC 17792 36 100.0 30 .................................... CCGCAAAGCAGCCGAAAAAGCCGACAGGAA 17726 36 100.0 30 .................................... CATGCCGTCGGGCGGTGTTGTAAATTTTAA 17660 36 100.0 30 .................................... TGACAAATAAAGCACGATTGTTGCAAAAGG 17594 36 100.0 30 .................................... CCAACGGATAAAATTACGCCCAAGCACCTG 17528 36 100.0 30 .................................... GTATTGAGCGTCAAGTACTCGCCATTCGAG 17462 36 100.0 30 .................................... TGAAGGTTCGATAATTCGACCTGAAAAACG 17396 36 100.0 30 .................................... TCACTCTAAAAATCCGATTCTACCACCGCT 17330 36 100.0 30 .................................... TTGGCTCGTCTGCTGCCGTCAATCGTGCGC 17264 36 100.0 30 .................................... TAGATTGCCTCATATACGCCGAGCGGGTAG 17198 36 100.0 30 .................................... CAGGTCGTGCTGGAGCAGGCCGACGATTTT 17132 36 100.0 30 .................................... CATACAGTTCATCTTCACCTGCAATCAGGG 17066 36 100.0 30 .................................... CACGAAACCCATGATTACATTCGCTACTTG 17000 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 19 36 100.0 30 GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Left flank : TGCCGA # Right flank : ACCCCAACGGGAAATCCTTATTCTATAAGGATTTCCCGTTTTATTTAGTCTGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGCTGGAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATCGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACACCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //