Array 1 7539-8466 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXZV010000070.1 Pseudomonas aeruginosa strain CriePir317 NODE_70_length_25840_cov_55.282620, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 7539 28 100.0 32 ............................ TGTCAGAAGGGATTACCGCGGACCTGGTCGCA 7599 28 100.0 32 ............................ TCAGGCTCATTTCGTTGTCCTCGATGCCCCGG 7659 28 100.0 32 ............................ GGGAGGGCATGTGATGCGAGCAGACGAGTACC 7719 28 100.0 32 ............................ GGGCCCGACGGCTAGTAATTCGCGGAGGATGG 7779 28 100.0 32 ............................ TGTCCGCAGCAGGCCGGTAATCCGGATAACTG 7839 28 100.0 32 ............................ TGCTCGCTGATGACCAGCCGCAGCGCATGGTT 7899 28 96.4 32 .......................G.... CGCAAAGCCCCGCAGGACAATGACTTGATATC 7959 28 100.0 32 ............................ AATCCGAGGCGGAGTTCAGCCACTTGGCATAG 8019 28 96.4 32 .....................C...... GCAGTGATCGAGCGCGCACGGTCGCGCAAGAC 8079 28 100.0 32 ............................ AGAAGCGCATCCAGCGATACGAAGATGCACTC 8139 28 100.0 32 ............................ AACCAGCGTGTCGATGCCGAAGCGAAGGCCCG 8199 28 100.0 32 ............................ AGTGAGCACGATCATCATGTCGGCCTGCTGGC 8259 28 100.0 32 ............................ ATCACCGGAGGCCACGGATTCGCTGTAGCTCA 8319 28 100.0 32 ............................ ACCAGCTGCTGCGAGTGCTGGTTCGCGCTGGC 8379 28 96.4 32 ........................A... TGTCCCGAAGTTCATAAGCGGGCTTCGGGCGA 8439 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================ ================== 16 28 97.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAGAGGGTTAGAGATCGCTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGTTTTTTGGTCTA # Right flank : ACGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGTCACCAGTCGAAACGAAGTCCCTTTCCATGGAACTTCGTTGCGGACATGCCGATGAGGTGCTGACGGGGTTCTTCAGAACCAGGGAACGGAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGTTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGGCGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGGTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 19359-16991 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXZV010000070.1 Pseudomonas aeruginosa strain CriePir317 NODE_70_length_25840_cov_55.282620, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 19358 28 100.0 32 ............................ TTCGTGACGGCTCGTCGTTCACCACCAGTAGC 19298 28 100.0 32 ............................ TACCTCCAGTTGCGGGGCTCGGTAGAGCTCGT 19238 28 100.0 32 ............................ TGGGGCGAAACCCCTAGGCGCCGGGCTAGCTC 19178 28 100.0 32 ............................ TCCTCAAGTTTTGTCAGCCGAGCCAGCATTTC 19118 28 100.0 32 ............................ TCGATGCCCCGGCGAACCGGGGCGGGGTGGTT 19058 28 100.0 32 ............................ TGATTGCTGCGGCACCTGAACTGCTCTCCATT 18998 28 100.0 32 ............................ TACCCCTCATTAGCCCGGCAAGTCCGGGCATT 18938 28 100.0 32 ............................ ACTCTGCGCCTCGACGTCGGGATCTACGAAAA 18878 28 100.0 32 ............................ AAAATGAAACGGATCAGCTCGCCGACAATCTC 18818 28 100.0 32 ............................ TGGAGCGCTGCACCATTACCCGCGCAGCCCGA 18758 28 100.0 32 ............................ ACCCGAATGCATCACCAACCCACGGCGTGCCC 18698 28 100.0 32 ............................ AGGACTCAGCGAGCCTTCACAAGACGCCTCCA 18638 28 100.0 32 ............................ ATCGAGCAGTGCATCGCCGTCTACAACCAGCT 18578 28 100.0 32 ............................ TGATCGACATCAGGAACGCCCACAGAGGCCGC 18518 28 100.0 32 ............................ ATCACGCCCCAGCCACTTTTCAACCCCGCACT 18458 28 100.0 32 ............................ GGTGTGTGCGGCCAGCTCGGACCCGAACTTGA 18398 28 100.0 32 ............................ AGTCACAGCCGCCGCAGCAGCCAGACCGCCCG 18338 28 100.0 32 ............................ TTAGCGAGTCACCGGGACAAAGGTGACCACGG 18278 28 100.0 32 ............................ TGTCCGAACTCCCATCTGTTGCCCTGATCAAC 18218 28 100.0 32 ............................ AGAAACTGCGGAACCGGAAGTGCATTGATCAA 18158 28 100.0 32 ............................ AAGTTCGTGACTGAGCACCGGCACCTGGGCAT 18098 28 100.0 32 ............................ ATCACGTGTGATTTTCGATGAACGTGATTTTT 18038 28 100.0 32 ............................ GGAACGAAGCGGGTGCGACACGTCGCAACTGC 17978 28 100.0 32 ............................ AGACCATCACACCGGTGACGCTGCACATCGTC 17918 28 100.0 32 ............................ GCATAAAAGTGCCAACGTCGACTTTGTAGCGT 17858 28 100.0 32 ............................ AGGAGGTTCTGGTCCGTCGCCCAGTTCCCGGT 17798 28 100.0 32 ............................ TCGCCCGTCACGGAGCCCGCCGCCTTGGTCAC 17738 28 100.0 32 ............................ AGAATGGACTGCCGAGCGCCGGCCGCCAGTTG 17678 28 100.0 32 ............................ CGGCATTGCTGAATGCCATAGCGGATCTGCTC 17618 28 100.0 32 ............................ GGCATCCCCGAGCGCAAGCTTCCATCCCCGCC 17558 28 100.0 32 ............................ AGCGGCCTGGACCTGGTTCGGCCCGTCCAGGC 17498 28 100.0 32 ............................ CAGAAGCGCCGGCCGTTGGCGAAGAACCAGTA 17438 28 100.0 32 ............................ GATACCTGACGGCCTGGTGCTGGATCACCTGT 17378 28 100.0 32 ............................ TGTCCTTTCAACTCGGTCTGCTCGTAGAGGTT 17318 28 100.0 32 ............................ TTGAGAAGCCGCGGGTGTCTAAGAAACTGGTA 17258 28 100.0 32 ............................ AAGACGTGGCAGGCGGCCTACAACCACGACGA 17198 28 100.0 32 ............................ TGACTGCGGGGCTGCACGACATAGTCGTCGAC 17138 28 100.0 32 ............................ GTATGAAGTGTGTTACCGCGTGGGCGATTCCT 17078 28 100.0 32 ............................ TCGTAGTGGCCCCACGTCGGCGGTAGCTCGCC 17018 28 96.4 0 ...........A................ | ========== ====== ====== ====== ============================ ================================ ================== 40 28 99.9 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCCTGTACGTAGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : CTCGAACCCACCTCGGCCACAACAGCCACCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCGCTACCAAACATCCGAATATAAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGACAGGCCACGGTCAGCATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACCGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //