Array 1 2431159-2432712 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015421.1 Rhodovulum sulfidophilum strain SNK001 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2431159 29 100.0 32 ............................. GCGATGCAAAAAATGGGGGTCGTCACAAAAGA 2431220 29 100.0 32 ............................. GGGGGTGGCGAGAGGGCGCCGCCGGGCATAGA 2431281 29 100.0 32 ............................. CTGGTGAGCGTCAACCTGGACAGCCTGACATA 2431342 29 100.0 32 ............................. CGCCGACCCCCGGTCGCGTCTGCCAGGTATTC 2431403 29 100.0 32 ............................. TTGTTACGCCAGAGCGCCGTCCCGTAATCTGC 2431464 29 100.0 32 ............................. TGCGATCTGGTGGCGCGGGGTCTGCCGCCACT 2431525 29 100.0 32 ............................. GGGAAAGTCAGGCTCCGCGTTCACAATGGCGC 2431586 29 100.0 32 ............................. CGCTCAGCAAACATGCGCAGGCTGTCGATGCC 2431647 29 100.0 32 ............................. CCTATGTGGTCTTCTCTGATCCAAGAAATTGC 2431708 29 100.0 32 ............................. GGGGGTTACACAGGCGGGGTTACTCTGGACGG 2431769 29 100.0 32 ............................. ATGAAAGCTTGATCTTATGGCCGCTGCAATTG 2431830 29 100.0 32 ............................. ACCGATTGCTCTGCGGCCGGGGGCGTTCTTTC 2431891 29 100.0 32 ............................. AGCCCCATCCACGCCCGCAGTCTGCAATCCGG 2431952 29 100.0 32 ............................. GCATTGGAAAGGCGGGGGAATAGATATGCCCC 2432013 29 100.0 32 ............................. GCGCTGCCGCCCTCCATCCAAGCCCGGCTCAT 2432074 29 100.0 32 ............................. ATCTGCCACCCGAGAGCGGCTAGTGCGTGCGC 2432135 29 100.0 32 ............................. TACCCGGTCACCAACATGCCGAAGGTGGGCGA 2432196 29 100.0 32 ............................. ATGAAAAGGACGCGAAAAAATGGCAAATAGCT 2432257 29 100.0 32 ............................. GGGCGGCAGGCGGTCGAGGCCCGGATGCGCGC 2432318 29 100.0 32 ............................. ACACCCTGGCACGCGCAGGACGGGTGGGAATA 2432379 29 100.0 32 ............................. CACCATGGCGACCTGAGCGCGGCCGAGGTCAA 2432440 29 100.0 32 ............................. GGCAGCCGCGATCCGGAGGCGTGGATCTCCGA 2432501 29 100.0 32 ............................. CCCCTTGCCCGTAGGCTGGGGACCATGGTCGG 2432562 29 96.6 32 .........................G... CCGGAAGACCACATCAGTGTCTGGCTCACCAC 2432623 29 100.0 32 ............................. CGGATGCGCCGGGCGCAGGGAAAGGAGTGAGG 2432684 29 96.6 0 ..........................T.. | ========== ====== ====== ====== ============================= ================================ ================== 26 29 99.7 32 CTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CTGGCCTGCTAAAGAGGATCATTCCTGCCATCGAGGAGGTTCTCTCGGCCGGAAACCTTCCTCGTCCCGAGCCGCCGCCCGAGGCCGTTTCTCCCGCTTTTCCCGATGCGCCGCCGACGGGCGATGCCGGTCACCGATAGTCTATGTTGGTTGTTGTCGTCTCCAACGCCCCACCGCGCCTCCGGGGCAGGCTGTCTGCCTGGTTGGTCGAGGTGCGCGCAGGGGTTTATGTCGGCGACTATTCGGCCCGGACGCGCGAGATGATCTGGGAACAGGTTCTGGCCGGGCTTGATAAGGGGGATGCCGTCATGGTTTGGAAGGCACCGACCGATCAGGGCTACGACTTTGTGACGGCAGGTCAGAACCGCAGGATGCCGGTGGATTTCGACGGATTGAAATTGGTCAGTTTCTTCCCCGAGCCACCAAGCCGATAGGCGGAAGAGGACGGTAGGTTCTTTGACATCGTGAAAAATTTTTTAGATCAACGGTTTGCAGTAAGA # Right flank : GGAGGAGTCGGCCGCACTCTGATAGAAAGTTCCCGTTCTCTGCGCGCCTGGGAGTGAAGCGAGAGCTTGCTAATCATTCCGAATGACTTCCGGTTGTGGTGTACAAAAGCGTCGCGTGGCCGTGCGTCAGCGCTCAACAGATTAACTCCCTCTGACCGCTTCGCCGATCCGCCGCGCGATCTCGCCGGGCGAGGGGGCGATCCATCCGATCAGGGCGACCAGCACGATCCAGGGCGGGATGACATTGACGATGACGGTCTCGACGCGGTCGGCGCGGAGGCGGTTCTCGGACTGCTCCTGGCGGATCTCGCGGGCGCGCGGCCGAACGATGCTGGGCGCGTTCTCGACCTTCTGGCCCTGCACGTTTTCGGCCCCGGCCTGGACATTCGCGGCGAGGTTGGGGCCAAGCGGCGCGGGCAGCCCGCCGCATCCGGCCAGCAGCAGCGCCGCGAGGAGCGCCCTCATGCGCCGTCCCAGCGGAACGGGACATTGGCCGGAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //