Array 1 2231906-2233687 **** Predicted by CRISPRDetect 2.4 *** >NZ_RRCN01000001.1 Paenibacillus oralis strain KCOM 3021 KCOM3021_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 2231906 32 100.0 35 ................................ GTTGCTATTTAAAGGTGTAACAATCACGAATGATG 2231973 32 100.0 34 ................................ CCGGATGGCAGCCACGTCTATTACGACACCTCCG 2232039 32 100.0 35 ................................ TGCGTATTGCAACCGAGTATGACGCTGTAAATTCC 2232106 32 100.0 34 ................................ ACCTTATGGCGATCGCAAATAAGAGTGGTTGTCC 2232172 32 100.0 37 ................................ TATAACGACACCACAGACAAAGATATTGGCATGCTGA 2232241 32 100.0 36 ................................ ATTCAAAAGATTACTCATTTTTGCACCTCTCCCGAT 2232309 32 100.0 35 ................................ CCATCACTGACATTTGTAAAAAGCTCGTTTATCGC 2232376 32 100.0 35 ................................ TTGTGGTGTACCATATCAGCAAATGTTATTCTACT 2232443 32 100.0 35 ................................ TAAGTTTGTTTTCAGCCAGCTACCAAACGGTTTCA 2232510 32 100.0 37 ................................ TACGCCATGGACTTCTCCTATCAAGGTTGGGCTAACT 2232579 32 100.0 37 ................................ GCTCATTGCCAGACTGAAAAGCCTGGTCTGCCTTGGA 2232648 32 100.0 36 ................................ ACGAATTATTCCAGCGTTGAGGATTATGTACGTGGA 2232716 32 100.0 36 ................................ TTGAAGGTGATTGGGATACATTCGCAGGGCAATATT 2232784 32 100.0 36 ................................ CGGCTATGAGCAGAAATTGGAGAACGTGGCGCATGC 2232852 32 96.9 37 .......................T........ AAATCTTTCAGGATTTGGTATCCAGATGTGCGGAACC 2232921 32 100.0 36 ................................ GGCTGGGTGCATCGAGAAACCGGTAAGCGCCGGTTT 2232989 32 100.0 34 ................................ GGGGAACGTTCAACGACTATCGGTGAGAAACCGA 2233055 32 100.0 37 ................................ TAGCGCTAAATTTACGAGTCTGACCCCAAGGGTGCGC 2233124 32 100.0 35 ................................ GTTTAAAATTTCCTCGATTACTTCGCTTTTGTCAT 2233191 32 96.9 33 ..................A............. ATTGCTGCCTGTGTTCAGATCAAAGAAATCGCC 2233256 32 96.9 34 ...........T.................... CGGAAAGAGGAAGCACCGGCTGCGCCGCCGGATG 2233322 32 93.8 35 .....G.....T.................... ATCACGCCCAATGTCCGGGGCAAGCGGCAAATACC 2233389 32 96.9 38 ...........T.................... AAGAAGTTTCTCGGGGAATACGGGCTCGAAGTTAGACA 2233459 32 90.6 33 A..........T...G................ ATTGGAAAGGTCAACAATGATGCGGATGGTCGG 2233524 32 93.8 36 .........C.T.................... GCTCACCAGCTCTTGGCCGCGCTAATGGCGCTCCTG 2233592 32 90.6 32 .........C.T......A............. CCCAATTTTCGATGCGATTAACGCCATGCCCG 2233656 32 75.0 0 ...A......TT..A.......A.....C.GG | ========== ====== ====== ====== ================================ ====================================== ================== 27 32 97.5 35 GTCGCACTCTACGTGAGTGCGTGGATTGAAAT # Left flank : GATGAGTACCGCCATTTTTATGGCAGTAGGTGAGTCGGGATGCTTGTACTCATTACTTATGATGTTCAAACAACAGGCGTAGGAGGTGCCGCGCGGCTGCGTAAAGTGTCCAAGGCGTGTCAGAATTACGGGCAGCGGGTGCAGAATTCCGTGTTTGAGTGCATTGTGGATGCAGCCCAGTTCACTGCTCTGAAATTGGAGTTAACCCAGTTAATTGATGAAGAAAAAGATAGCTTGCGATTTTATCGGTTGGGCAATAACTACAAAACCAAAGTAGAGCATATTGGGGCCAAGCCATCGATAGATTTAGAGGAGCCGCTTATCTTCTAGCGGTGCGAACCCCAAGCGCACATGAAATCCCTGGGAGGTTCGCACCCCGCGTCATTAAAGGGTTTGTAGAGATTTTGGTTAAAATTAATGGAGAAATTTCGTGCTCGCAAAATGGGTTCGCACTTTTGGGCTTACGAGGCCTTGTGCCACAAGGATTCGCATGGCCCGCT # Right flank : GGAAATATTGGACTACACTTTCATACTATTGACTAACCGTTCATAATAAATGCTCTGATTCTGAAAGTCTCGCAACTTTTTGGGGTTCATAGCAAAGCGCTTTAGGTAGAGATGATAATCATGGCGTTAAACGTCAAGATGGCTTTCCACGTAATTTGTACGACTTCCCACACGTCGCCGAAGACGACGACCCCGGTCAGCAGAGCCAGCACCGCGCCGCTGTAGGCAGACCGGCCGATGTTCAGCCCTTTGGGCTGCCAAATCACGAAGTCAACGTCATGATAAAAATAACCTATGTCGCAACGATGTCAAAACTCATAGTTCCCCTCCATTATTACAACCGGAGAAGTGTATAGCTAAGCGAGTTGCTTGTTGGGATTGCTACTTAATTGTAATAAGGCTTTTTACCCGTATATTGGTGAATTATGACAAATCTTGCGGTAAAATAGAACTAGGTTGTATATGATCATACGCGAGGAGATGTGCTTGTGTATATTGCC # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.60,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2242798-2245516 **** Predicted by CRISPRDetect 2.4 *** >NZ_RRCN01000001.1 Paenibacillus oralis strain KCOM 3021 KCOM3021_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 2242798 32 100.0 36 ................................ CGGATTATTACGATCCAGGCGAAGCAACTCCCTATT 2242866 32 100.0 35 ................................ ATTCTGTTTTTCATCATGGCGAATGCCGGGCTGTT 2242933 32 100.0 34 ................................ TTCCTCTGCCGCAAAAGCCAAAACGGGAAATAAA 2242999 32 100.0 33 ................................ GAATCCAAGGGTTATGAGATCGAACAGCCCGAG 2243064 32 100.0 35 ................................ TTATGCAAAGGAGGGATTAGCATGGTGTCGATTCG 2243131 32 100.0 34 ................................ TTATGCAAAGGAGGGATTAGCATGGTGTCGATTC 2243197 32 100.0 36 ................................ GGTAACAAGCGCAGCAAAACGCATTGGCTCGTTTTT 2243265 32 100.0 38 ................................ CAAATCTTATCAACTCAGCGATGCAGCGAGGGCAGCAG 2243335 32 100.0 35 ................................ TGCATCTGTAATTTGGATCGCATGTGTGAGTGCTT 2243402 32 100.0 37 ................................ GACAAGGCGAAGGAATATGTAGGCGGCTGGCGACCAC 2243471 32 100.0 34 ................................ CAGAAAACAACTATGATAAAGAAAAAAAGAAGCT 2243537 32 100.0 34 ................................ CGGAAGGTACGATCGTAAAAATTAAGGAAGACGA 2243603 32 100.0 35 ................................ GTCAAAGGTCACCACTTTGGCCGGAAACCCTACAT 2243670 32 96.9 33 ..................A............. CTCCTTAGAGGGGCCGAAGCCCCCGCGTTAAAT 2243735 32 100.0 34 ................................ TCTTTGTATGATGTACTGAGCGCTGAACCAGTTG 2243801 32 100.0 35 ................................ TGGTATCTAAAGTGACGGTTGGCGAGGCTCTGATT 2243868 32 100.0 35 ................................ TTTAGGAGGTACGCACTCATATGGCAAGTAATCAG 2243935 32 100.0 36 ................................ GCTTAGCTACGATGCCCTCCATGCCGCGCTCTACGA 2244003 32 100.0 37 ................................ AATTTGCATCGGTGAAACCTTCGAAGCCAGCGGGCGC 2244072 32 100.0 36 ................................ CAGAACGGAGCGTCTCTGAGTTTGATGCCGTGCGAA 2244140 32 100.0 35 ................................ TGAGATCGCCGAGGCTGTCGAAGATTATCGGGATG 2244207 32 100.0 36 ................................ GCCCGAGAGTATGAGTTATTTACTCAATATGGCAAT 2244275 32 100.0 35 ................................ CCGTATAGGAACTCGCGCCCATGGCTGCACAGGTC 2244342 32 100.0 36 ................................ CGCTTCACCAGCCGGGCCGTAGAAGTTAAGGACAGG 2244410 32 100.0 38 ................................ AATCATGCCATCAGAATCGATATGAACAACACCTCGAC 2244480 32 100.0 33 ................................ TCTCCCTCGCTTTCGGGTAGGTTTATTTCTGCG 2244545 32 100.0 35 ................................ CTTGTAATTCCGTGCCATTAACTTGTCTGTAAGGC 2244612 32 100.0 36 ................................ CCGGAGGATTTCCAGGCCAACGTCTAGCGCATCCGG 2244680 32 100.0 34 ................................ TATCGCTACGCCCAATAGCAGACATCTGATCATA 2244746 32 100.0 37 ................................ CAACTGGTCTTCCAACTGCGAAGCTCTCTGCGTCTCC 2244815 32 100.0 34 ................................ AATTCGCGTCACACGCTCCGACAGCTCATCAAAC 2244881 32 100.0 34 ................................ TTACAATGAGTGCAGTAAGCAGACTGAATGCCTT 2244947 32 100.0 35 ................................ AGGAGAGCAAACAGGATCGCATTGAGCTTGATGAT 2245014 32 96.9 33 ..................A............. GTCATAATGTCGGTATATAGCGCGACCGCCTCC 2245079 32 100.0 36 ................................ AGGATCGCACAAGCGCCCTATATCTAAAGCATGATG 2245147 32 100.0 36 ................................ ACTTTGCCGATGTAAAACCGCTCGAAAGTGCCTTTA 2245215 32 100.0 34 ................................ GGGATTTGCAAAAGATTGAAGAAATGAAAAAAGC 2245281 32 100.0 36 ................................ GGAAATGAAATTCCGGATGAAGTGGATCTCACAAAA 2245349 32 100.0 35 ................................ TATTAGCAACGGCGCTAACCGTCCGCTCCTCTTCC 2245416 32 93.8 37 ..............A.....T........... CAGAAAAAGCTTCATGTGCTCGCGTCAGTATCCAGTG 2245485 32 96.9 0 ...............................G | ========== ====== ====== ====== ================================ ====================================== ================== 41 32 99.6 35 GTCGCACTCTACGTGAGTGCGTGGATTGAAAT # Left flank : ATTGGAGTTAACCCAGTTAATTGATGAAGAAAAAGATAGCTTGCGATTTTATCGGTTGGGCAATAACTACAAAACCAAAGTAGAGCATATTGGGGCCAAGCCATCGATAGATTTAGAGGAGCCGCTTATTTTCTAGCGGTGCGAACCCCAAGCGCACATAAAATCCCTGGGAGGTTCGCACCCCGCGTCATTAAAGGGTTTGTTAGGATTTGGGTTGAAATAAACGGTNATAGCTTGCGATTTTATCGGTTGGGCAATAACTACAAAACCAAAGTAGAGCATATTGGGGCCAAGCCATCGATAGATTTAGAGGAGCCGCTTATTTTCTAGCGGTGCGAACCCCAAGCGCACATAAAATCCCTGGGAGGTTCGCACCCCGCGTCATTAAAGGGTTTGTTAGGATTTGGGTTGAAATAAACGGTAAAATTTCGCACTCACAAAGTAGGTTCGCACTTCTGGGTATGTGAGGCCTTGTGGCTCAAGGCTTCACAAGGCCCGCT # Right flank : GTTATGCGACGCTCACGGCGGAATACCCGGACATAGTCGCACCAGCAAAATGAGCTTTTTCTCGAACAAGCGGTCAAACGATTGAGAAATATTCAGTCCTTAAATAGCGGGGATAGAGAGGAAAAGTACGGGCGGGGGAATGATGGAGGAAACGGAGGTCCTATACATCGTTATCAGCAAACAAGAGGTGTCCACGCTTAATAAGATTGTCAAATCCATCGACAAATCCGCCTTTATCACCATTCACGACGTGCGGGATGTGTTTGGCGAGGGGTTTTTGGATATTTCGAAGTGAGTGACAAAAAAACCGCAACCTTATTTGGTTGTGGTTTTTTGTTTTTCTCAATAAGTAAGTTGGAAAGACGCTGATAGCACTGTGTGCTCAAGTTCGACCTGGTATAATTTGTTTATGGAGCAACAAGGAGATGGTTACTATTAAGAGTTTTGTGAAAATCAATATAATGAGTTTTGGATACGCGGTAATGTTATCTTTCCCTATA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.60,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 2769431-2770192 **** Predicted by CRISPRDetect 2.4 *** >NZ_RRCN01000001.1 Paenibacillus oralis strain KCOM 3021 KCOM3021_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ============================================= ================== 2769431 26 100.0 41 .......................... AACAGGGAAGCGCTCATCGCTCAATGCATCCCTAAGTCGCT 2769498 26 100.0 40 .......................... TAATTTATGACAGGAATAGCTGTCTTCGTCCTCTGTCGCT 2769564 26 100.0 42 .......................... GAAAAAAGGCCGAACAGCCACAAATAAAACAAAAGGGTCGCT 2769632 26 100.0 42 .......................... GAAATTAGCGAAATTGCAGCGGAAATTTTGGACCTTGTCGCT 2769700 26 96.2 39 .......C.................. ACGAAGGTTATCGAATCGTGCAGGTCTTCATCAGTCGCT 2769765 26 92.3 41 ......AC.................. TCACTATCATCCAGCTCAACCTGCGCCCGGTCGTAGTCGCT 2769832 26 92.3 45 .......C......A........... TCCGGATGCCGCTCAAGAATCTGGATTAAGGCAAGGATGGTCGCT 2769903 26 96.2 41 .......C.................. ACAATTGTGGCCTGTGTTTCCGAAATTCGATTCCAGTCGCT G [2769914] 2769971 26 100.0 40 .......................... AAATCCTCGCTGGAGGTATCGACTTTGTCTTTGAGTCGCT 2770037 26 92.3 39 .......C.....A............ ATTGTAAAAGCCAATGCCCAAAACTTCATGCTTGTCGCT 2770102 26 88.5 39 ....A..C......A........... ATCCGGCGCCGGTGTCCGTCCTGAAAGCTACGGGTCGCT 2770167 26 73.1 0 T...A.CC.....T...A......T. | ========== ====== ====== ====== ========================== ============================================= ================== 12 26 94.2 41 CCCTGTGTGGGAGCGTGGATTGAAAG # Left flank : AACGCCAAATAATCGAGGAATTATCGGATTTATATAGCGGCAAACCGGCCTTTTTGGACGAGTTGAGCCAAATCCATGACCGGTCCAATTAAAGTGCTCCTCCCTTGCGGGAGAGTTTTTTGTTTAATTTAGAAGTCGTCGCTTGGCTACTGTCTATAGACCAATTCATTGGATAGATATTAGGGGGTGGAAAAAGAGGGTTTTGGTCGATAGGGATCGAAATAGGTGCGTAAGGTTATGTGACTTTAACGAGAAATATACGACGATGTAGCCTTGAAGTACTGAAGAGTAATCAATTGGCTGGCAAAAGCGGGGAAATAATAGCGGTGCGAACCCCAAGCTCACATAAAATCCCCGGGACATTCGCACCTCTTGCCCGGCGCGGTATTGCGGGATTTTGCGGTTAGAATTCCCCTGTTTTTAAACCACAAAAAAGGGGATTCGCACTAAAGCGTTTCCAAACCTTTGCTGGATGTGGGGTTAAGATGAACGCAGTCGCT # Right flank : GAAAGTTACTGCTGGTGATTCCGACGTATCTATTCGCCGGGCGCTTCCCACGTGAAGGCAGTATCTTGTAATGAAAGTACCTTTCGGTTCGGGGCTTTTTTTGTGCACTCAAGATCTAATGTGGAGTGATTTTAGAGTGAAGCCTCCCCTTTATCGATTGCCTAGATGATTATTCCTTCGCTTAGAGAGAGGAGATAGATAAAGTTAAGGGGGCCTATGGAATTAACGGATTTATAAAAGGCAAATCGGCCTTTTTAGATGAATTGAGCCTAATCCACGATTAGACAAATTATTTAACTCCTCCCTCGCGGGGGAGTTTTTTTGCTTGACTTAGAAATCGCTGTAGAAATCCGATCAGAAAGGCGACTCTACCCTCAGAATCATTTCTCACTCTTGCTTTAGGCCTATAATATATTGGGAAATTTGTGGGAAAAGAGGGTTTTGGTCGATAGGGATCGAAATAGGTGGAACAAGGCGAATGGTTCTTTTTTCCTGGGTCG # Questionable array : NO Score: 8.66 # Score Detail : 1:0, 2:3, 3:3, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTGTGTGGGAGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCCTGTGTGGGTGCGTGGATTGAAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-24] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 2778593-2779426 **** Predicted by CRISPRDetect 2.4 *** >NZ_RRCN01000001.1 Paenibacillus oralis strain KCOM 3021 KCOM3021_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================== ================== 2778593 31 100.0 36 ............................... CGTTCGTCCAAAGCGTCACCAACACGACAGAGAGCG 2778660 31 100.0 36 ............................... GTTCAGCGTCTTGGCGGCAATGACGGCGTTATGAAG 2778727 31 100.0 37 ............................... AAGTGGTTACGCTAATATCGAATACGGGCGTAACAAG 2778795 31 100.0 37 ............................... TTCAATGATTTTTTGCAGCTTAGTTGGATAATCAGTG 2778863 31 100.0 40 ............................... AGCGAGGCTGACAGCATGGCCCGCAAAGACGTGACCGAAG 2778934 31 100.0 35 ............................... TAACGCAATTCCTGCGCGAAAACGCCGCAGCCGTG 2779000 31 96.8 34 .........T..................... AAAACGGCCGTTTTCCGAGCTATGCAGAGTATTG 2779065 31 100.0 34 ............................... CCCGCGGCGGCAGTAAAGTCAATGGACCCTCGAG 2779130 31 96.8 37 ..A............................ ATTATCCGTGAGGGTTTGGGGAAATTCTGCGAAACAA C [2779138] 2779199 31 96.8 34 ...............A............... GTTACGGTCATGATCCGTTTATAAAGGATATAAC 2779264 31 100.0 34 ............................... TCCAGAAGATCCACAAGCTGACAGGCCGCTTCAG 2779329 31 93.5 36 .........T..T.................. ATCTTTGCGGTGTAAAAATGGATATCGGAGGTAAGG 2779396 31 93.5 0 .........T..............A...... | ========== ====== ====== ====== =============================== ======================================== ================== 13 31 98.3 36 TCGCTCCCTATGCGGGAGCGTGGATTGAAAG # Left flank : TATCGTAAAGCATTTGTGTGGTACAAGACAAAGGATTCTGGAGAAACAAGTGAAGAGCAGGCAGCGGAAGCACAGGAAAAAAAGAAGCAGTACGATTTGCAGAATTACCGAGTACTCGTCAACCTGGATAGCAAGAGCGAGGAAAAAGAAGAAATCTCGCTACTCTCACTAACGTTTCAACTGAATCAGATTTTGATGCTGATTAATAACCCCATGTTATTCCCGCATAAAGCTTACGTGGATATGTTTAACGAAAAATATGCGGCGAAGTAGCCTTGGAACATCAACGGGATAGTAATCGATCGGCTGGCAAAAGTGAACCATAAAGGTGGTGCGAACCCCAAGCTCACATAAAATCCCTGGGGCATTCGCACCCCTTGCCCGGAGCGGGATTCCGGGATTTTTCGCCAATCCTTACCCCATTTATTAATCATAACAATGGGGATTCGCACTAAAGCGCTTTCAATCTCTTATTGGATGCTGGGTTGAAATGATCGCCG # Right flank : GCCTCCAGTGTAGAGCCGCCGCCAGATTGTATATGTCGTTCCCTTACGAGGAACCAGAATGGGATTTACTTGCCCAAGAAAGAAAAAGACTCGATAACTGGGTAAGTAAGATCGAGCCCATAGGTTAATTTTGTACACATGAAGGAGAACTAGCTTATCTACTGTCCAAAAATTCTGTTGAGAACTTCTGGACAGTGAGTTTTTTTGCGTCAAAACGAGGAATTATCATTTTCGTTTAAATTTAAAAGGGAGAATTACGACTTAACCTAAAAATCGGTGTTTGTCTCACCGGTTAGCCTCGAATGATCAATCTATCCTGAATATTTTCTACGCTAACGGTTGTCATCGCGCTTATTCGGCCGAAAATCGGGTGATTTCTTTTCTAAGGGTTGTATATGCGCTTATTTGGACGAAACAGCCCCTTTACCGCCGAAAAATAGGAAATAAGGCTCGCTGGCAACCGTTACATTTTGCAAACCCCCGTTTTAGCCTAAATAGCG # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCTCCCTATGCGGGAGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.50,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //