Array 1 5412-6342 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDIS01000038.1 Bifidobacterium lemurum strain DSM 28807T, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 5412 36 100.0 28 .................................... GACCATTGGCTCGTCTACGTATACGCCA 5476 36 100.0 28 .................................... ATTTGAAGCCGTGTATGTCGTGCGGGTG 5540 36 100.0 28 .................................... AAAGGAGTTGGCGATGAATCCGCTGAAG 5604 36 97.2 28 .................................C.. TTGGTGTGACGTTCATTGAGGTTACATC 5668 36 100.0 28 .................................... GCTCATGCGGGATGAGCAGACCATCTAT 5732 36 100.0 28 .................................... ACGCGATAGATGTCGAGTTCGCGGACGG 5796 36 100.0 28 .................................... CGATCATCTGCGTGCCGACGCCGTTGCC 5860 36 100.0 28 .................................... TGCATAGTAGGCGGTGTTGCCGTGAGCT 5924 36 100.0 28 .................................... TAAGATCGTATCGGGTGGCGGTGGCCAT 5988 36 100.0 28 .................................... TAAGAAGCGCATGTCCTATTACTTTTCG 6052 36 100.0 28 .................................... TGTAGGCCTGCGGGATCTCATCGATGAA 6116 35 97.2 28 .............................-...... CTTTGGTCAGGCGGTGAGCAGCACGAAG 6179 36 100.0 28 .................................... CAAACATCCCGTGAATGCGGGCAAGATG 6243 36 100.0 28 .................................... GAATGGAGCGGCCACGTTCCCGTGATGC 6307 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================ ================== 15 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : GTTTAACGGTGTTGGTTTGACCATTCCAAGCTCTTTGAATGACTTTGCTCAGCAGTTTGGAATGTACTGCGAGAAAAAGATCGACCGTCTTGAGGTTCCTCTCTTTGAGGGGATCTATGAAAATCGATGAGGACAGCGGAGGCATGTGGTGTTTGGTGATGTTTGATTTGCCGGTGCGAACCAAGAAGCAAAGGCAAGAGGCCACACGGTTTCGTAACTTGCTGCTTGATATGGGCTATTCGATGGTGCAATTCTCTGTATACGCTCGATATACGCCAACTCAGGCTGGAAACAGGGCGACGGTGAAGATGGTAAAAGAAAACCTGCCAGCGAAAGGGCAGGTCCGAATACTGCATATCAGCGATCACCAGTGGTCGACGGCGCTGCGTTTTTCCAGTCGTAAGGTGGATCATGAGGAAGAAACTCCAGATACGCTTTTGCTTTTTTGATTGGAAAATCGAGCGTAACCTATTGGAAAATAGCCCTTCTTGACGAGCTAT # Right flank : CTAGATGGCGGAGGAGAGTTCGTGGAGGTTCAAGCTTATCAAGAAGGGTGAGCAGGGATCTTTCGTCGTCCCTGTTCCCGATATAAATAGAGTCGTATATGGTGTCGCTGAGTGATGACAATGAGACCTGCATCGGTGAAAATGTTAGTTCTTCATACGAGGGATTGGCGTTGTCTTTGTGAATGGTCTACTTTGGTTTTTGCGCGTGATTAATATTTGAAGCTGAGAATTAGTGCTTTAGTTGCGTGTTTAAGCCGTCTTCTGTTGGAGAAGACGGCTTTTTCAATATGTTTCATGACGACATCTGTTTTGAGATTCTGTCTCGGCATACCATGCCAATAAATATTTGGAGAGCCATGAAAGGAGATTCGGATGTGGCGTATAGATATGACTGTTATGCATGTGGAAAAGGAACGTCACTTTACGGTGAAAGTGCTAAGAGCCGCACTGCTGGTTGTGGTCAGCATGCGCGTAGCGATGCATTGCATATTCCAAGTGTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //