Array 1 20837-18729 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKND01000001.1 Parabacteroides distasonis strain BIOML-A3 scaffold1_size478473, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================= ================== 20836 33 100.0 34 ................................. ACAAAGCTACCGACAGGGTAAACAAAGCGAGGAA 20769 33 97.0 39 ................................T GACAATGGCTGGATCATCATTGACGTGACGACTACCGAC 20697 33 100.0 33 ................................. AGAAAAGTTGGGTCTCCTTGATGAAGCGGTAAA 20631 33 97.0 33 ................................T TTCGAGTAGATTTCCTTGCCCGGGTTCAACTTC 20565 33 97.0 32 ................................G CTCCACTTTTCACCTTGTTTTTGATACGATAA 20500 33 97.0 33 ................................C ATAAATCATTAAAATTAGGCAATAGCTCATACC 20434 33 97.0 33 ................................C GGTCAGTCCGTTCTCCACCGCACGGTTGTAGAC 20368 33 97.0 33 ................................G GTGTCCGTCCCGAATTTGAACACGACCGGAAGA 20302 33 97.0 33 ................................G ATGCGGACGCTATGCAAGTAACCTTAAAAGGGA 20236 33 97.0 35 ................................T TGCTGTCGGGCAAGCGGGTGGAAAGTACCGGAACC 20168 33 97.0 36 ................................C TGAATATGGGCGTGTCATAACCGACCTCGGACAGGA 20099 33 100.0 32 ................................. TTGACGATGGAGGTTCCCGCTCCGGAAGGTAA 20034 33 97.0 35 ................................C CGCCATTGTTTAGCGGTTGTGCCGAATAGAGCGAC 19966 33 97.0 35 ................................C ATCAGATTGATGAGCGTACATGATTTGGAACAGGA 19898 33 97.0 34 ................................G TCTGGAAGCATACGGACTTGAGGTAGTAGAGAAC 19831 33 97.0 37 ................................G ATTTTGGGGAGATCGAGGCCATGGAAGAGACTCCAGA 19761 33 97.0 34 ................................C ATCCGCAGGGATGGGACTGTACACATCTTGATAA 19694 33 100.0 38 ................................. CCATCAATCTCCCTCAAATATTCGAGGAGACCGTTAAA 19623 33 100.0 36 ................................. CTCGCCGGCCGGCAAGGACAGGGTCTTGTACACACG 19554 33 97.0 33 ................................C CTTTGGATTAGTCCCTTTGCCGGCAACGAAGCC 19488 33 97.0 33 ................................C CTCTCGACCTCCTTATAGGCGCAAAAAGTATTG 19422 33 100.0 32 ................................. TTATATCCAAAACGTTTATGCGTATTGCCTAT 19357 33 97.0 32 ................................G TTGCAGCGCCGCTTCAAGAACCGGAAGATCGA 19292 33 100.0 33 ................................. GAACTTAATCTTTCTCGACCAACCCTATATGTT 19226 33 97.0 33 ................................T CCAACCAACTGGTATATCTTCAAATCGAATAGT 19160 33 97.0 35 ................................G TTAACCTCTTTGCTAGATTTAAACAGCTGGCACCA 19092 33 97.0 34 ................................G ATCTCTTTATAGGCGCAAAAGGTGTCATTTACAC 19025 33 97.0 34 ................................T CACTTGCTTTCTTTACCTCGTTTTGGACTTTGTT 18958 33 100.0 33 ................................. CTTGGTATGTGCTACTCTCACAGCATACCACCA 18892 33 97.0 32 ................................C CTTACTATGAGGTGTTTAACGGATCGGATAAA 18827 33 100.0 33 ................................. GTCGTAGTATGAACCGTTATTCTTTGGGCTTGT 18761 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ======================================= ================== 32 33 97.9 34 GTCGCACCCCGTGTGGGTGCGTGGATTGAAACA # Left flank : TGATAATTATCCGGTATTTCTAATAAAATGATTTACGATTATGCATATTCTTGTGACTTATGATGTGGATACTACGAGCAAAGAAGGAGCTCGCCGCCTACGACATGTGGCTAAGGCTTGCATAGATTATGGCCAAAGGGTACAGAATTCTGTCTTTGAGTGTGAGGTGACAGAAGCACAATATTGTCTCTTGATTGAACGAATCAAGCGTATTATTGATATGTCTCTTGATAGCGTTAGATTTTATATTCTCAATAAAAACGAGAATAAAAGGGTAAAAGTGATAGGTGTTGAAACTGCTTACAAAGTTAATAATGCTCTTATCATATAATTTATGCGAATGTGGAGTATTACGAAAAAAGTAGTATTTTCGCACCCCTTAATAATTAGCAGATTAACCCGTCTTTAAGGCGATTGCAGCCATTAAGCTGAAATAAAAATGAGAATTCGCATATTAATAGGTCTAATTTATTGACTTATAATATGTAACTTTGCACACT # Right flank : TTTGTAAAGCGCAAGCTTTTTCATAAAAGATATACTTACGTGATGAAGTATATCTTCTATGGGACTTGAAGTGTTCTTCTGCGACGAAGGGATTAGTACTTCGTAAAAATAACTTTTTAAAGTCACTGACTCTGACATATAATTTCGCTTAGTTATTTCTGCAAAAATCATTCATATGTAAACAAGTTTCGTATATTCGCGACCTTATAATAGTTTAAATATGGCAGAGGAACTACGGATTAAAAACGGTGATAAACAGGAGATGTATGAGACATTGCTCCCGCAAATCGCCTCATTGGTAGGTAACGAGACCGACCTAATCGCTAACATGGCGAACATCGCCGCAGCACTCAAGCAGACTTTCGGTTTCTTTTGGGTAGGTTTCTACCGGGTCATAGACAATCAGTTGGTATTAGCGCCTTTTCAAGGCCCTATCGCCTGTACACGTATAAAATACGGAAAAGGGGTATGCGGCACGGCCTGGAAGGAGGCTCGTACGA # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.42, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCGTGTGGGTGCGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.60,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //