Array 1 1247532-1246837 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LR594045.1 Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413 chromosome 1		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1247531	    36	 100.0	    30	....................................	AGTCTTTTTGGCAGCGGGATTCACCTACCT	
   1247465	    36	 100.0	    30	....................................	TTGAAATTAAAGGCACAACTTTTGCTGCGG	
   1247399	    36	 100.0	    30	....................................	TGTTAGAACTGCTCATAACATTCGAGATTC	
   1247333	    36	 100.0	    30	....................................	GACTTTAATATCTGCGTACACGATTGCATA	
   1247267	    36	 100.0	    30	....................................	ACAAAGTAACAACAGATAACTACAAATCAG	
   1247201	    36	 100.0	    30	....................................	GATTGTCTCAGCAATTAACCTCAATGGCCA	
   1247135	    36	 100.0	    29	....................................	GTCGAAGGGACAAAAAAGGGAGATCGAGA 	
   1247070	    36	 100.0	    30	....................................	TAGGGGCCTTGTCAGATTATCAAGATGGCT	
   1247004	    36	 100.0	    30	....................................	TAAAACCTACCACAATAAGACAGGTTTTAC	
   1246938	    36	 100.0	    30	....................................	TCGCTCCGCTTCAGTCATTTCTCTTCCATA	
   1246872	    36	  94.4	     0	.................................TT.	|                             	
==========	======	======	======	====================================	==============================	==================
        11	    36	  99.5	    30	GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC	                              	       

# Left flank :   AGAAACCTGAAGTGAAATCGATGATTGAAAAATTGGTTGCTACGATTACAGAACTGATTGTCTTTGAATGCTTAGAAAATGAATTAGATTTAGAGTATGATGAAATCACAATCCTGGAATTGATTAAGTCCTTAGGAGTAAAAGTAGAAACGCAAAGTGATACTATTTTTGAAAAATGTCTAGAGATACTTCAAATTTTCAAATATCTCACTAAGAAAAAGTTGCTTATTTTTGTCAATAGCGGAGCTTATCTAACAAAAGATGAAGTGGCTAGTTTACAAGAGTATATATCATTGACAAATTTAACAGTTCTCTTTTTAGAACCACGTAAACTATATGATTTTCCGCAGTATATTTTAGATAAAGACTATTTCTTAATAACTAAAAATATGGTATAATACTCTTAATAAATGCAGTAATACAGGGGCTTTTCAAGACTGAAGTCTAGCTGAGACAAATGGCGCGATTACGAAATTTTTTAGACAAAAATAGTCTACGAG
# Right flank :  AATATCGTCAATATGACTTGAGAGAGGGATAAATACAATATCCTTATGCCTTCCCATTCTTTCTATTAAAACGTTTTCATGTTATAATAGTCAAAAGGAGAAGGAGGGTGGAGCGATGGAACAAACATTTTTTATGATTAAGCCGGATGGGGTTGAGCGAGGGTTAGTTGGAGAGGTTTTGCGGCGGATTGAGCGTCGAGGGTTTACATTTGAACGTTTGGAGTTGCGGCAAGCTAGTCCGGAACTCTTGGCTAAGCACTACGAAGCCTTGGTAACTAAACCATTTTATCCTGAGCTTGAAGCTTACATGACAAGTGGTCCTGTTTTAATTGGGGTGCTGTCGGGAAATCGGGTGATTTCCTCTTGGCGAACCATGATGGGGGTAACTAATCCTAAGGATGCTCTTCCCGGGACCATTCGTGGTGATGTTGCCCAAGCTCCTGGTGATGATGGAGGTATTTTTAACGTGGTGCATGGGTCTGATTCAAGAGACTCTGCTA

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-2.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
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