Array 1 2913746-2913343 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDBS01000001.1 Natrinema sp. CBA1119 contig00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ========================================== ================== 2913745 33 100.0 42 ................................. ACCGCCCGTAGAATCCGTCGTGTACTGCGCTGTGTTTGATCT T [2913744] 2913669 33 97.0 40 G................................ ACCGCCAACAGGAGGAGTTGGGGGAGCGGTTCACCGGTCG 2913596 33 100.0 41 ................................. AGTGCGCCAAGGACGCTGAGCTCAGTTGCGTAGCTGGGTCG 2913522 33 100.0 41 ................................. ACATCGCTATCCAGCAGGACACGAGCGAGACGTACATGTCG 2913448 33 97.0 40 ........T........................ TGCTTGTACTCGGGGTGTCGGGTGTTGGCAACGAGAGTCG 2913375 33 93.9 0 ..................C.C............ | ========== ====== ====== ====== ================================= ========================================== ================== 6 33 98.0 41 CGACGCAGCAGAAACCCAGAACGGGATTGAAAC # Left flank : TGCTTGAAGCTGCCGAGGGGACGGTGGTACTCAACTTCGACGGGGGTCCGCGGGAGATCTTTCTCCCGCTAACCGTCGCCGCGATCGTTCGGCCGAACGTCGTTGACCTCGCACTCCAGTTCAGGGACATCGACGAAAAATCGAAGAGATCGGCCTCCCGGACCTGATGAGCAGCCCGTCCGACGCGACTCTTGACACGCTCCGGTATCTCGTCTCTATCGACGAGAGTACGACACTTCCTGAAATATCTGACGAGACCGGGAAATCGAGGAGTACTGTCGGTCGACACTTCGACGCGCTCGAATCCGATGGCGCCGTCGAGACGTGGATGGAGGGCAAAACCCGCTACGTCGTACCGACACTTGCCGGCCGACTCCAGACGTAAGTGCCAATTTTCGTCAACCCTTTTCAAAGCCATGTACAGCTGGGGTCCACGAACGACTCCCCCATTCTCGCGTCTCCAGAGAAAACTATAGGTGCTATCCCCCAGAAAACACCCC # Right flank : GCAAGCGTTGGCCGGTGCGACCGAACTGGTCACGACGTCGCGACGCAGCAGACGTCGAGAAGAGCGGATTCGCCATGTTACTCCCCTGTTACGTGACACTGGCAAGTTAACTTGATTATACCGTGAATCGACTCCGATTGGCCGGGAGGCTTTGATGTGGACTCTTGGCAATCAGTTTTTGGCGATGTGATACAGCGATGCGACCGATTATGTTCGGATCTTGGATAAACGACGTTCACAAATCGTGTGACTGATGTCCACCAATCCGACGGTACGTATCTCATCGTCGGTGCTGTCGGCTTCGAGCCACCGAAACACTTTGTACTGGTCGCTGAACGTCTATTATGGGAACGATCGAGGTTCCATCAGACGTTTACGATGCCCTCAACGTCCCGGACGACAAACGGGACGACGTCTTGCGCAACGAATTGGCGATTTCGCTGTACCGCGAAGGCATCCTCTCGTTCGGAAAGGCTCGAGAACTCGCACCCTCTCTCACC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGACGCAGCAGAAACCCAGAACGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [2,13] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.10,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : NA // Array 2 2922086-2923360 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDBS01000001.1 Natrinema sp. CBA1119 contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 2922086 37 100.0 37 ..................................... ATCATCTCTGGTCTCAACTCTCTGGGTCCCATGAAAT 2922160 37 100.0 37 ..................................... CGTTTGCAGTCCCTCCGACGTTGCACTGCGTCCACGG 2922234 37 100.0 38 ..................................... GACTCGGTGGAATGCTCGAGTCGTCCATGTCCAAAGAC 2922309 37 100.0 34 ..................................... ACGTAGGTGATGCTATGGGTGACGTTGCTCAGAA 2922380 37 100.0 36 ..................................... CGACCTCGAGATAATCCCGCCCGGTGATGAAGTTAC 2922453 37 100.0 37 ..................................... AATATCACCGACGCACCACAGGATTTCGCCGATGGGA 2922527 37 100.0 36 ..................................... AGGACGTGACGCCGACTTAGTTCCTGAGTCAATTCC 2922600 37 100.0 35 ..................................... AACCGGACTCGGTGGAACTCTCGGAAGCCGAACGC 2922672 37 100.0 35 ..................................... TTCGTGGTACAGTCCGAGTCGCCGCATCACGCGGT 2922744 37 100.0 35 ..................................... AACGGTGAAGACCTGTCGAAACGCGGGAAGCTCGC 2922816 37 100.0 35 ..................................... ATCGGGTGCCGTGGCATCGGCTCCAGGAGGCGCTC 2922888 37 100.0 36 ..................................... TCAGGTAATCCTCACTGGATGGGAACCCGGGGTACT 2922961 37 94.6 35 ........CT........................... TGTTGCCGCCAGTCCTCCAGCAGCATGTACTTGAA 2923033 37 100.0 36 ..................................... TGGCAAGAAGATATCGTGAATGAACGGGCTGACGGG 2923106 37 97.3 36 ........................G............ TGGCAAGAAGATATCGTGAATGAACGGGCTGACGGG 2923179 37 97.3 36 ........................G............ TGGCAAGAAGATATCGTGAATGAACGGGCTGACGGG 2923252 37 100.0 35 ..................................... ACGAAGTCGCCGGCCCCGTAGCGACTAGTGTTCCC 2923324 37 94.6 0 ......A............................G. | ========== ====== ====== ====== ===================================== ====================================== ================== 18 37 99.1 36 GTCGCAGGGCGGTAGAAACCCAGAACGGGATTGAAAC # Left flank : GCACTTCGAGTACCGCGTGAGTCGTCGAAAGGCGATCCGACAGCAAGTGATCCTCCTGCGGAAAGCGATAACGGGTGAGCTCGACGACTACCACGCACTGGAGGTGTCGCGATGAGACTCGCAGTGACATACGATGTCAGCGACGACACGAATCGTCGGCGCGTCTATCGGACGCTGGAACGATATGGGGCATGGCGACAGTACAGCGTCTTCGAACTCGACGTGTCGAAGAGCGAGCGGGTCGAGCTTGAAGACGAACTCGAAGAACACATCGACCCGGCGGACGGAGATCGAGTCCGGCTGTATCGGCTCTGCGAAGCCTGCCAAGAGGCGACGACAGATCTCGGGACCGAACCACCGGACGAGCAATCGAACGTCATCTGACGTCGGCTTTCGTCGACCTTTTTTAAAGCCGTGTACAGCAGGGGTCCACGAGAGCGAGCCGCGCTGTCGTGGGTAGAGTAAGGTTTATGGACTCGCTCGAACAAAAATCACCCCCT # Right flank : CCTGGCAAACTAGTCTACAGGCGGAGCAGGCCGAGTGCCTCGGGGCTTGACCCCGAGAGTGAAGGCCGTACGCTCCGCTAAACGTGTTCTGTGCGCTCGATATATTGTTCAATCGTGTCGGTCGAAACATCTTCCGCCGTTCCGACGTAATACGATTCCTCCCAAAATCCGCCACCCCACAGATACTCTTCCAAGAACGGTTCGTGCTGTTTCCACATCTCTCGCGCCGTGATGCTCTTGACCGTTCGCACGATCTCGCTCGGTGCGTGTTTCGGATGGGCTGAAAGGAACAGGTGTACTCAGCTGAGAAGGCCACTAGCTGTCAATATCATTTATGTTCCCTGATGGACGAATGGCTCTTAGCGAATCGCACAACGACGCTGACCCCCGTTCACTAATTGAATGGACTCTAAACGTCGAACGACGCCCCATTTAAATACACCCCGATGCTGTCCCTTGGATCTGAACCATCCAAAATCGGATGGGCCCACAAGATCCGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGGGCGGTAGAAACCCAGAACGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [12,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA //