Array 1 186061-184882 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRRC01000006.1 Paraferrimonas haliotis strain CFD7-4-2 NODE_6_length_209524_cov_218.948, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 186060 36 100.0 38 .................................... TCTTCCTTTTGTGCTTCAGCCGCGTCACTATCTACGTG 185986 36 100.0 36 .................................... TGCCGTCCGCAGGATTCGTGCTTGTAATGTCGTATG 185914 36 100.0 36 .................................... CGTGTTGACTAGTGATACGGCTTGCACCTGAAATAA 185842 36 100.0 35 .................................... TTACCAGTATCAGGGCAGTTAGCTTTCTGGAAGGC 185771 36 100.0 38 .................................... TCAACTTTTTGTAGCTTTTTAGCTACTTGCTTTTTATC 185697 36 100.0 34 .................................... TAAGTACGGAGTCTATTGTCTACCTTGTGAGCTA 185627 36 100.0 36 .................................... GTCGAAGTTAGAGTCGTTAAGAGACTCTGCTTCTTT 185555 36 100.0 34 .................................... TACCCCTGCCTTGACTCCCATGCGTTTGAATTTG 185485 36 100.0 32 .................................... ACAACTTATCCCCTCTATAACTGACTTGAAAT 185417 36 100.0 38 .................................... GGCGAGATGTCGCGGATGCCCTGTTCGCGCTGCTCTAT 185343 36 100.0 37 .................................... GCATTTCGCGGTCAAGGTTTTTAGCCATTGCGGCGCG 185270 36 100.0 37 .................................... TTCGTTTTTTACGATCGCTAACAGTTCTAAATTTAAG 185197 36 97.2 35 .................................A.. TCTAATTGAGCTAGCTTATTTAGTGCATAAATTGC 185126 36 100.0 32 .................................... ACCACCACAGGGACAATACGTCGCGTATCGCC 185058 36 100.0 35 .................................... ACATCTCGACGTTGTCGGGGATGCTGTTGAAGGTT 184987 36 100.0 34 .................................... GACCGTATCATTCCCGACTTTGCCAAAGCCGGCG 184917 36 91.7 0 ............................G.....GA | ========== ====== ====== ====== ==================================== ====================================== ================== 17 36 99.3 36 GTTGGAACATTGCCCCGACATAAAGGGGATTAAGAC # Left flank : GAATAAGGTAAATGCAGCTAATATTTGGTTTGTCGGCGAGTACAGTTATTAAAGCTGGTGTGAGGTGATCGGATATAAGATTTATATGAATGCTCACCTAAGCTCCTTTGGTATTCCAATAATTTGAATACTTTCCATAGTAAACTAGCCTAACTTATTGGGTACGCTGGGGTTCCAGCTCCGCTCTGGTCATAAAGCATAAGGTAGGAAATTGAAAGTTAAACTTACAAGAACTTTACCGACAACTTCGTGACTTAGAACACGTTTTTATCAATTAACTATTTTTAAAACCTTCAATGCAGTGATACGTAGCGAGCAGGTTAAACGGTTTCGTCAGCGCATTATATTTCGAATTGAATGATACCCAATTAACAGGTAATCTATCGGTTGTTTCCAATCAAAATAATCAACTAATGATATCACCAACTTTTGAGTTTTTTATTTTTTCTTCAAGCCTACTTATAACTTGCTGTTTTTACAACTTAAAAAGTGGGTCTAGG # Right flank : GTGTGCGGACGCATTCCCTTATCAAAGGCTAGAGGTTTAAAATGTTGCTTCGTTGTATAGCTGCAAACTGCTGAACTTGCTTTTCCAATTCGTATAAGCCTTCAAGTACAAGCAGATCGTTGTAGTCCGTTGGGCAGGCTATCAATGATGTAGCCGAAAATTCGGGTGCTAACAGGTGGTCACCCTTAAGCATAGCCAGTTTCGCTTTCTCGATTCCTGTGTTTCCAGCGTGGGGTTTCCATTGATCATTGTCAGCAAAAAAATATACGAATGACTTTGTGTGATGAGATATGCTCTCGCGAACATACTTTAAATTATTAGCAGTTAAAGCTACATATATTGGTCCGGCCCAAACTAAAGCAATAGTCAAGCCGGTAACAAGACCCTCACAGATTGCAATTTTGCCTGCTTTTGCTCCTTTAATCTCAATATAGCTACCATTTAACCGACCAGATTTAAGAATTAAATGACGTTTATGGTCTTTACGGTTTCGGGTAAAG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGAACATTGCCCCGACATAAAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.30,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 5854-6242 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRRC01000015.1 Paraferrimonas haliotis strain CFD7-4-2 NODE_15_length_7442_cov_261.159, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 5854 36 100.0 36 .................................... ATGCGTATTCTTCTTCACTGAATACTTCTAGTTGAC 5926 36 100.0 37 .................................... TCTTTTAACAGGGCGAAGACTTCCGCCATTGGTTCCA 5999 36 100.0 34 .................................... ATGGTTCAAGCTTTACAGATAAGTCTTTTGTAGT 6069 36 100.0 32 .................................... TCACGGCGGGGGAGGTGTGGGCGCGGTGCAAT 6137 36 100.0 34 .................................... TTCAATTCTGTGATTTCTTTCGCTATGTATTCGC 6207 36 94.4 0 ............................T..G.... | ========== ====== ====== ====== ==================================== ===================================== ================== 6 36 99.1 35 GTTGGAACATTGCCCCGACATAAAGGGGATTAAGAC # Left flank : CTGGCGCAAGCGTTTGCGAGCTGTTTGCGCATTGTTGGCAAAGAAATTGGTTGAGTGACTTAATATGGCTAAACACTTTATTATCAGTTACGACATTAGAGACCCGAGGCGGGTTAAGCGCGTGCATAAGATGTTACTAGGATATGGTATTCCTCTTCAGTTTTCAGTTTTTTACTTTAAGAACAGCAAGGCTATGAGTGTCGAAGGTATATGGAAAAAACTCGAAAAACTTATCGATAAAAAAGAAGACGATGTGCGGTTATATCCAGTAAGTATTGTTCAGCTAGAAGAGTGGAATAAGTTAGGTGTAAGTGATTTAAGTGCGGGGATTTACGTTGAATAAAATATTTGGATTGAACGGCTCTCAATTAACGGGTAATCTAACACGCGTTTCCAATTAAAATAATCAACTTATGATATCACCAACTTTTGAGTTTTTTGTTTTTTCTTCAAGCCTACTTTTAACTTGTTGTTTTTCAAGCTTAAAAAGTGGGTCTAGG # Right flank : CAGACGATTTTTCTAAGCTTTTGGCCTTGCGTGTGAGGAGCAATATTGGAAAAGGGGCTGGGATTGGTGATAGCCCTAATGCTTCGACGAAGGTAAAACAAGCCGCAGAGTTATCTCAAGCTGGCTGTTTTTGTTAATATTTTTCAGTCTTAAGGTAAACAGCAACGCATTGGTTTAGGCGATGCTATTTACCCTTCCTAGCTATTTAACAACGCGATATGAGATATCCGTACTCCAATCTTCGCTGTTGTATACGGATACTGAACTTTCGAGATTTCGTAACGCTTCGAGTTGGGCTATTTCGTTTTCTTCAAAGTCAAATTTTATTCCTTTATAACGAGAGTTTACCTCTCGCAAACGCCAGTAACCCAAACCTTGGTCTAGCTTAAATTTAATAGTTTTATTAGATTCAAGGGTCAACGTTAATAGCCGCCTATGAGCAATATCAGCTCTTTTATCTTGCACTATAAGTTTTGGTTCCACTTTCGTTTTGAACTCAA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGAACATTGCCCCGACATAAAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.00,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //