Array 1 4751227-4750345 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP041253.1 Echinicola soli strain LN3S3 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 4751226 46 100.0 30 .............................................. CGATAGAATCAGAAGAAAAATAGAGCTACT 4751150 46 100.0 30 .............................................. ACTTGAGAGTATATGCGATAGTAGCGCCAT 4751074 46 100.0 30 .............................................. TATCAGTGAGTCAGATTGAAAAATTCAGCA 4750998 46 100.0 30 .............................................. CTCCTAACATGTATCTTTTGAAACACATGC 4750922 46 100.0 30 .............................................. CTGTTGCCAATCAACCTCTATAAACTCCTT 4750846 46 100.0 30 .............................................. TCAAAGAAAACATTATCATAACTCCCTGTT 4750770 46 100.0 30 .............................................. GCACGATGCCATTTTACCATTTCTGGCGTA 4750694 46 100.0 30 .............................................. AGAATCATTTAAAAGATGAAAACAATATCA 4750618 46 100.0 30 .............................................. ATGTCCATATGAATTGAAAGTGTTAGCGGC 4750542 46 100.0 30 .............................................. TGAATCATTTAAAAGATGAAAACAATATCG 4750466 46 100.0 30 .............................................. ACCATTGGTTTCAGTATTAATTCCCAATTA 4750390 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 12 46 100.0 30 GTTGTGAATTGCTTTCAGACTTATACCTTGCAATGGTAATCACAGC # Left flank : GGACTGGGAGGGGCGGACGCGGGAAAGGAAAATCCATGCCGTGCCCGTACTGGAAAGACTTGGGAAGTGGTTGGAGGAAAACCAATACAGGTACAGGCCGGGAAGCCCGCTGGGCAAGGCTATAGACTATGCCCGCTCCAGGTGGGCGGGGTTAAGTGCCTATACGCTTCACGGACAGATGGAGCTGGATAATAATCTTGTGGAAAATGCTGTCCGGCCCTTGGCAATCGGCAGAAAAGCCTTCCTTTTTGCCGGATCGCACCAAGCCGCAGAGATGACCGCAGCCATGTATTCCTTTATGGCCAGCTGCAAAAAGAACAATGTTAACGAGTTTGAATGGCTCAAAGATGTCTTTGAAAGAATACAAAGCCATAAACAAAAAGACCTTTATCAGCTCCTCCCTTCCAACTGGAAGCAGTACCGACCTAAATAAAAAACTTAAATATTCCTAGCTTGACCTATATGGGTTGATCGGATGGATACTCTTTTTCCAGTTGTGT # Right flank : ATACCCCACTTCAAGTGGTTGGTATGCTGTTGTTTATGTGGTTTTTTGGGATTGAAAAATGAGCCTGTTTTGATAGAGAAATTTTGTGAGCGATGCGGAAATATTTATTGTAAATTTCTGTTGTTTGAAGTGTATATGGCCCATTACCTGATTCGCTCCAAAATTTATTGATGCGGAGATTCCTTTTGCTCCCGCACCCTTGGTGACAGCAATAAAAATGGATCAAGCGGAAAAGTTGGGGGGATTAGGGTTGGTTTCGATAGCACGCAAATGATGCAGATTAATAAGATTTGCGCTGATTTTTTATAATAAACGCGATTTAAAATACCGTCCTTGCGAGGAAGTATAGCCTGTCCCGAGCTATCGGGAACGTGGCAATCCCGTATTAAGAAAACGAGATTGCTTCACTCCGTTGCTCTGCATTCGCAATGACGGATTTATACTGATTTTATAATCTACACATTCCTATTGCTAAATGAAAGAGAAATATGCTTACCAAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAGACTTATACCTTGCAATGGTAATCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.87%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 4753864-4753590 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP041253.1 Echinicola soli strain LN3S3 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 4753863 46 100.0 30 .............................................. AAAACTAGAATTTAATTTATTCAACGCGTC 4753787 46 100.0 30 .............................................. AACGATGCGGGAACGGTTAAGATTTCGGCA 4753711 46 100.0 30 .............................................. TACAATTTTTAAACTTTAAACATTTAAAAA 4753635 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 4 46 100.0 30 GTTGTGAATTGCTTTCAGACTTATACCTTGCAATGGTAATCACAGC # Left flank : AGCTGGGAGAGCTAAAGATGGACGCGTTTGCAGTGGATAGGTATGCGCGGAAATAACAGGGATTTTCTAACGTTTTGACCTTCAAGGGAAATTTCAATTATTTACTGTTCCCCTTTCCAAAATTCCAAACACTTGCAATATTTTCCCAGTTGGCAATCAGGCGCGTGCCCGGTACACCAATCAAACACAAAGACGCCATTGTCTATTGGGGTAAATGTTTCTTCAAGTAATCCTATGATAAGGCTGTATTTCTCACTAATGGGTAAGCTATTGGGAGTATCAAGGATGCCACCCCATGAAGCAAGCATTTTTTAGAAGGCTTCACAGCTTGTTTGATTTCCGCATCAGTGAAATCTTTGGAAGGCGGAAAATCCACAGGGACCAATCCATAGAAATACCCTAATGTATGTTTGGCGTCAGCGGAAAGCCAAAGTCCACGAATACTTATACCTTGCAATGGTAATCACAGCGAGGGCATCCAGCCCACAGCAGGAGCCTAT # Right flank : ATTTTTCAGTGTTTCTTTTTCGTATCCATCCGAGCAAGTCCATATTTCCTATCATGTTGCAAAGTGTTAATGTTGCAGGATGAAAAGTTTAAGCAGCGAAGATTACTACGTACTGTATGAGGAATGGAAATCCTCGGGACAGACAAAGGCCAAGTTTGCCGAATCACGGGACCTTTCGCGCAGCACCTTTTATTATTGGGCCAGGAAGATTGGACGGATGGAGGTATCTCCGGGACACGCTGGCTTTGACCTACTGGAGATATCCCCGCGGACTGGCCAAAATCCTGCGGCAAGGATATGTTATCCTTCGGGGGTCGTTTTGGAGTTTTATGGCCTGCCTGATCCAGCGATACTCAGGCAGCTGACCGAGTAATGCTGGCCTTGTCCAACTCGGTCCGGTATTTTCTTTACGGTCAGCCGACCGACATGCGCTTTGGGATCAACTCGCTGGCCGGCCTGGTGCAAAATGAACTTGGGTTTGATCCGATGAACGGGGACAT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAGACTTATACCTTGCAATGGTAATCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.87%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //