Array 1 1152363-1152834 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTYC01000001.1 Ruminococcus sp. AM36-18 AM36-18.Scaf1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 1152363 36 100.0 28 .................................... AAGTCAAATAAACATATTGAGTCATATG 1152427 36 97.2 26 ...........A........................ AGAAAGTTAAGGAATAATGGGTATAG 1152489 36 100.0 25 .................................... AAAGTCGCTGTCGAGCTTGTCAATC 1152550 36 100.0 27 .................................... AGCATAGTCCACGATGTCGGCTTATCC 1152613 35 97.2 26 .............-...................... TAGCTGTTGTGATTGACCCGATATAC 1152674 36 100.0 27 .................................... GCAACTGCATCAATCTCTACATCAATG 1152737 36 100.0 27 .................................... GAACATCAAGAGTGTACAGTTTGGAAC 1152800 35 88.9 0 A..........................-..T.T... | ========== ====== ====== ====== ==================================== ============================ ================== 8 36 97.9 27 GTTTAATAACCCTATATAATTTCTACTATTGTAGAT # Left flank : GGCAAATTTTTTGAGGATTTCTTTAAATTATTAAGACTTACCCTACAGATGCGAAACAGCAACCCTGAAACAGGCGAGGACCGTATTCTTTCTCCCGTCAAGGACAAAAACGGCAATTTTTACGACAGTTCAAAATATGATGAAAAGAGCAAGCTTCCGTGTGATGCCGATGCAAACGGTGCGTACAACATTGCCCGCAAAGGTTTGTGGATTGTTGAACAATTCAAAAAATCCGATAATGTTTCAACTGTCGAACCGGTAATCCACAATGACAAATGGCTGAAATTTGTTCAGGAGAATGATATGGCGAATAATTAAATTCCGACTCTTTAACACGGTACTGTCGTTAAATATCACTCCGACAGTACCGTTGTCAAGGCTTGATATTTGACACAGATAATAAAATAGTATATAATCAGACTAAGGATACATAGAAAAAGTTTGGTTTTGCCAAGAATGAAGATTCCCCTTTGCCGATAGTCGGCTAACTTCTGCAAACC # Right flank : TTAGATAAAAAGGTTACTTACACCGATTGACAACAAATTCATTTTGTTACAAAAATACAAGCCACACACAAACAAAAGCAGAGAGTCCGAAAGCTCTCTGCTTTTTGTTGTTTTATAACATTGTACCGAACCATTACAACAAAGTTACCTACATAGCTATGGGAATTATCATAAACAGAAAAAGTCACGACTGCATATGCAATCGTGACTGGGTTGGTGGAGATGATTCGGACACGGAGAAAGTCACGGTTTAAAAATACTTGTGTCTGCCGAGTGAATTAAAAGGCTTTTAAGGAGTGTGATAAATACCTATATAAATACTATAAATTTGAATATCCTTAACTCACCAATTTTCGGCAACAGAAAAGGATATTGCAAGGCAGTTAAAACTGCCCCCCACACCTCACGCTCAGTGCGTGGTGTGGTGTTTTGGCTTGCAATATACTTTTTGTTGCCGAATTTTTTGTCTATATATATTTTTACACTTTTGCGTGGAAAAG # Questionable array : NO Score: 2.98 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.17, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATAACCCTATATAATTTCTACTATTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 68938-68441 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTYC01000005.1 Ruminococcus sp. AM36-18 AM36-18.Scaf5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 68937 36 100.0 30 .................................... GACAGCAGTACCCGAAATTCCGCCCATCAA 68871 36 97.2 30 ...A................................ CATTGCGACAACAGAGGCAATTGAACAAGC 68805 36 100.0 29 .................................... GATTGACCGTAAACGCAAGACAAGGATTA 68740 36 100.0 30 .................................... GTTGAGCAGTGTAGTCAGTAATGATATATC 68674 36 100.0 30 .................................... ACGCAAAAAGAAACAGCCCACAAGGAACTA 68608 36 100.0 30 .................................... TCAGCTTACTGCGATTTCTACCGGCATTCT 68542 36 100.0 30 .................................... GCGTGGACTGATTTTCCGCCCGAATAAACA 68476 34 88.9 0 .......................T...--......T | C,A [68444,68455] ========== ====== ====== ====== ==================================== ============================== ================== 8 36 98.3 30 GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Left flank : ATTTTAAAAGTTAAATTCGGTGATATGGGTGTTAAAATCGCATCTCACCGTGATGCTTTTGAAAAATTGGATGTAAGAAAACAATGTTTCGTTCTTGCAGAAATACTTAAAATCATACATTGCAATATATTAGAGGGAGATTTAACATTTATAGGAGGAGCAAAACAGTCAGGCTCAATTAAAATGAGTTCTGTCATATCAGGAATTAAAGGTGTAAAGTCGATTTATCTTGTTCATCAGTCGGTAACAGGTTTGTTTGAGAAGAAGATTGATTTGTTACATATGTAAGTTATCAGAAAAGAGGAAATTTAGATGAGTTGGAGAACGGTAGTAATTACGAAAACATCCAAGCCGGATTACAGCATGGGACACCTTGTTGTGATTGATAATGATTTATGCGAATTTTATTGACAATCATTATACAAATGTTATAAAATAACCTTATAGATTTGCCGTGCACAGTATAGTGGGTGCATTTTATTCCCAATTTGAGGTTTGAG # Right flank : TTTACTTGTGGACTGTGAAAAAACAGCATTGCAAAAAATAATATAAGGCACATAACCGTTATCACTTTCGGTTATGTGCCTTTTGTAGTTTAATAAGTTTGTTAAGAATACCACGATTGATTACAGTCCAAAACAAGGAAGATTTCAGTGCGTTAATTTCCAAAGTAAGTTCCACCATGAAAGTTACTTTGGAAATTAACTATTTACTTTTTTGTTTAAATTTGCGGTAAATATGAATTGTATAATCCGTTATATTGTGTTATTATGTAGTAAAATGGTGTGCAACATTGGTGTTTTGAAAAAAATTATGTTGTTGAAATTAAACTTGAAATAACTGACGGGTGGCATATGGTTCGCAAAGTTGACAAAACAAAGCTTCTGACTGTTGTCGGGATAATTATATTCCTGTTTGGAGGTGCGGTGAGAATTTTTTCTCATCTTACTTCCTCGGCGGACAATTATATTGAAAATTTTGATGTTATTATCTTTTCCGGGCTTAT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //