Array 1 26343-22051 **** Predicted by CRISPRDetect 2.4 *** >NZ_WYAR01000005.1 Acinetobacter baumannii strain VNMU85 MRSN489702_contig00005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 26342 30 96.7 30 ............................A. TTCCGCAACTCGCTACTTCCCTGATGCAGA 26282 30 96.7 30 .............................G GAAGATTTGCTTATGGCGTTCTGGAAAGAA 26222 30 96.7 30 ............................A. TGCTTAGTAATGCGCAAAAACGGTCATCCA 26162 30 93.3 30 ............................AA ACTTACACTTCTCAGCGTCAAACCATGCGT 26102 30 93.3 30 ............................GA TTACATCCACGAAAAGAGCTTTAATCAGGA 26042 30 96.7 30 .............................G GCAGAACTTTTCATGACGCTCATTCTCTAA 25982 30 96.7 30 ............................A. ACCTATCAACGTTAAACCAACGATTGCCAG 25922 30 93.3 30 ............................GA TGCAGAAGATGTTTTAGAACGTTATGACGA 25862 30 96.7 30 ............................A. TGGGATGTTATGAATATTCGACATTACCAA 25802 30 96.7 30 ............................A. CAAAATAGAGTTGGCCTTCCTGTTTGGCCT 25742 30 100.0 30 .............................. CAAACGCTTCAACCAGCCACGTCTTTGAAG 25682 30 96.7 30 .............................C TTCCGCCAAATTCTAGGAGGTTAACATGCT 25622 30 100.0 30 .............................. GTGCATACTTATTGCCGCCAGCAAGTAAAC 25562 30 96.7 30 .............................C CTTCGGGAGGTTTTCTTTTGGGGTGATCAT 25502 30 93.3 30 ............................AA GTTTCGGCCTAATGGATGCGGTCTTGAAAA 25442 30 93.3 30 ............................AA GGACTATCCGTCCCTTTGCCGTTTTTGTAC 25382 30 93.3 30 ............................AC CCTCGGGTGGTTTTTTATTGAGGTGATCAT 25322 30 93.3 30 ............................AG TGGCGCGTTCAAGCGTGCCATTGAAGCATA 25262 30 93.3 30 ............................CA GAAGTAAGTCTTGCAGATGCACGATCTAAA 25202 30 96.7 30 ............................A. CCGCCGATAAAACCCTTACCCGATACGCCC 25142 30 100.0 30 .............................. TGAAAGACTTGAACGTGGTCAAGTCCTCCT 25082 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 25022 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 24962 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 24902 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 24842 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 24782 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 24722 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 24662 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 24602 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 24542 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 24482 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 24422 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 24362 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 24302 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 24242 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 24182 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 24122 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 24062 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 24002 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 23942 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 23882 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 23822 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 23762 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 23702 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 23642 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 23582 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 23522 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 23462 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 23402 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 23342 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 23282 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 23222 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 23162 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 23101 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 23041 30 100.0 30 .............................. CAACTGTGTAACCAGATTTCGCTTTAAAAG 22981 30 96.7 30 ............................A. CAATGTAATGCTCAGGCGATGCCTTATCAT 22921 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 22861 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 22801 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 22741 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 22681 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 22621 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 22560 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 22500 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 22440 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 22380 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 22320 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 22260 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 22200 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 22140 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 22080 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 72 30 95.7 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.36 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //