Array 1 46277-41465 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRRI01000005.1 Rubrivivax gelatinosus strain DSM 1709 scaffold0005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================= ================== 46276 36 97.2 35 ...................G................ CGGCGGAAGGCCTCGACTGCGGCATCGGCCTCGCG 46205 36 100.0 36 .................................... TGTGGCGAAGGTAGTGCACTCCGCGGACGGGACGCA 46133 36 100.0 37 .................................... CTCCACCGCGCCAGGTGAAATCCCCCTTGACGTCGAT 46060 36 91.7 37 .............AT..A.................. CACAGCACGCTCACCGCCTGCTGCACCTTCAGCTGCA 45987 36 97.2 37 .......G............................ GTCGCCAGTCATCGGCACCTCGACTGGATCGGCCAGG 45914 36 100.0 38 .................................... ATCGACGTTGCCGCGCTGGTGATGCCCGAGGCGGCCTC 45840 36 100.0 35 .................................... ATCAGCGTGGCGTCGTCATCCTTGGCCGACGCCGG 45769 36 100.0 35 .................................... CTGGCGGCCATCATGCGCGACGACCAGACCATGAT 45698 36 100.0 35 .................................... GACAATACCTCGCTGTGGGTCGTCGTATGGGGGCC 45627 36 100.0 36 .................................... CTGCCCGGCGAGCTTGGTTGCCAGCAGCAGGTTGTC 45555 36 100.0 37 .................................... GCGACCGGCTACCGCGGCGCGGCCAGCGCGACCGGAG 45482 36 100.0 36 .................................... CTGGTTGCCCATCAGCAGGCCGCTGGCGGACATGTG 45410 36 97.2 37 ...........C........................ CTGGACTCGTCGCCGATCAAGATCCCGCTGGCTGCTG 45337 36 100.0 36 .................................... CGGCCGCACCATGTAGTCGATCGCCTCGGACTTGCT 45265 36 97.2 37 .............T...................... CAGGAACAGGCTCGGCGCGACGAGGCCGAGAAGCAAC 45192 36 100.0 36 .................................... CGGCGTGCTGCGCACGGCGTCATAGACCGATGGGTC 45120 36 100.0 36 .................................... GGCCAAGGTATTCCTTCAGCTGCTCGGCACGCACGC 45048 36 100.0 38 .................................... TCGTGCCGCGACAGGTCGCCGGAATGCTCGACGACGGC 44974 36 100.0 36 .................................... GTCGCGGCGCAGTGACACGTCGAGCAGCGCGGGATT 44902 36 100.0 38 .................................... CCGAGCGCCGTTCTGGCGCACCGCTACCCCAACACGCC 44828 36 100.0 37 .................................... GCCACATCGTGGCGACGGCCTGCCACGTGCCCGCCTG 44755 36 100.0 36 .................................... GGGCGCCGGCGGGTCCCAGTCGGTGGCTGCGGTGTC 44683 36 100.0 36 .................................... GTCGCGCACGCGCACGCCGCCGCCCGAGTCGGCGGT 44611 36 100.0 35 .................................... GTGTCCGGCCGTCAGCGCTGGAGCGGCGCCGACCT 44540 36 100.0 34 .................................... CGGACGCCGAGCCGGAGGCCAGCAGCGATGAGCA 44470 36 100.0 36 .................................... GAGGAACTCCTTCATCGTCAGCCGCTGGGGCGTGGC 44398 36 100.0 35 .................................... ATCGCGTGGAAGCGCGACGGGCACGTGAGCGTCAG 44327 36 100.0 36 .................................... GAGCTACCGCAAGGGCCGCGCGATCCGCGACTACGT 44255 36 100.0 36 .................................... CAAGATCGCGGCGCAGCGTGAAGCGGAGGCCGAGCG 44183 36 100.0 37 .................................... AGCGACGCAAGGCCACGGGGCGATGGGAGTACACCTT 44110 36 100.0 36 .................................... CTACCTCGACGGCATCAGCACGACGACGGGCAGCGT 44038 36 100.0 35 .................................... GCCTATACCAGCGCGACGACGCGGCGCAGCTTCAC 43967 36 100.0 36 .................................... CGCCTCACGGGCGCGCTCGACGTGCGACAGGCCTTT 43895 36 100.0 36 .................................... CCGCGGCAACGTGGGCGCCGCGTCGCAGGCCGCCGC 43823 36 100.0 36 .................................... GGGCCGAGTCATCGAGTTCGTGCACCGGGTCAAGAC 43751 36 100.0 35 .................................... CCGCGTGGCGCTGGGCATCAGCACGCGCGAGGCCG 43680 36 100.0 36 .................................... GCCGGCCGCGCGTCTGCAGGCGATCTCGACCTGGCG 43608 36 100.0 36 .................................... CGGCAGCATGCTGCGGTGGGTGAAGCGTCGGCCGCG 43536 36 100.0 38 .................................... CTGACGTACTGCTTGACCGCGGTGACCTCGGCCTTGTT 43462 36 97.2 38 ...................G................ ACCTTTTCGCCGACGCGCAAGCAACTGCTTGTCCTGCG 43388 36 97.2 36 ...................G................ CTCCCTAGCTTTGCGCGCGCCGGGTAAGCCCGCTTC 43316 36 97.2 35 ...................G................ ATCGCGATCGGCCTCGTCGTGTAGTTGGACTCGGC 43245 36 97.2 37 ...................G................ CCACGAGCGTCTGCAGGGTGCGGCGGGCGAAGGTGTC 43172 36 97.2 36 ...................G................ CCACCAGGGGATGCTGCAGAACCTGATCGCCAACGA 43100 36 97.2 37 ...................G................ GATCGCCATCCGCGAGCACAGCGCCGACGATCAGTCG 43027 36 97.2 36 ...................G................ CTACGCCCGCGAGCTGCAGCGCCAGCAACGGAACGC 42955 36 97.2 37 ...................G................ CGCCGCGATGGGCTCGCCGCTCGCGAGCGCAACTGTC 42882 36 97.2 35 ...................G................ AGGTGCTCGGCCTTGCTGGTGATGGTCGACAGCGG 42811 36 97.2 37 ...................G................ CCGAGCGTCACGTAATCAAAGACGTTTGCCACGAGCC 42738 36 97.2 37 ...................G................ AAGGCCACGGCATCGGCGCAGTCATCAGCCGCTCCGA 42665 36 97.2 36 ...................G................ GCCCGCCGCCTTGCGCTGCGCCCGGTTGCCCGTTTC 42593 36 97.2 37 ...................G................ GCTCCACTATGCTCGGCTGGCACCACGGGCACCTGGC 42520 36 97.2 45 ...................G................ GCTTCGGCGCCTGCGCATCGGCGGCGGCCAGGGCGGCCACCGCAT 42439 36 97.2 35 ...................G................ GCAGTGAGGCCCGTCGGCACCCAGGATGAGCCATC 42368 36 97.2 37 ...................G................ CCGCAATCGACGAGGCCATCGAGCGGCTGCGGGCTGC 42295 36 97.2 36 ...................G................ CCGGCGGCCGCCGTCGAAGAAGCTGCGTTGCAGCCT 42223 36 97.2 38 ...................G................ TTCCTCTGCGGTTACGCCTTCAGCGTGGGGGAGTTCTC 42149 36 97.2 36 ...................G................ CCCGACATCTGCATCGCTACCTTGACGGGAACTGTG 42077 36 97.2 36 ...................G................ CTCGCCGACACGCTTCAAGCCTTGGAGGTCTGCGGT 42005 36 97.2 36 ...................G................ GGCGCGCGCGCTGCAGATCAGCGTGCTGCGCGCGGA 41933 36 97.2 36 ...................G................ CCGGTTCGCTCGAGACTCGTTCCTGAACTACGAGAT 41861 36 97.2 36 ...................G................ TGGGGCCGTGCCGGCACAGAACGACGCGCCCGGCCA 41789 36 97.2 36 ...................G................ GCCGCTGCCGGCGGGCTTCATCGACGACGGCCTGCT 41717 36 97.2 36 ...................G................ CCCCATCGTCGACGGGAAGCGCTGGGCCATGGATTC 41645 36 97.2 38 ...................G................ GTCCGTCGCGGCGTCTCGCCCGGCGCGCTCGGCTTCCT 41571 36 97.2 35 ...................G................ CAGGTAGGTCAGGCCGAGCAGCACGCCGTCGGAGC 41500 36 97.2 0 ...................G................ | ========== ====== ====== ====== ==================================== ============================================= ================== 67 36 98.5 36 GCTTCAATGAGGCCGAGGCAGAGCGCCTCGGATGAC # Left flank : GTGCTTGCGCACCGTGAGCTCGCTGATGCCCAGCTCGCGCGCGATCTGCCGGCAGGACAAGCCCCGGGCCATCGCCTGGACCAGTTCGGTCTCCCGGCGCGTGAGCGGCGGGGCGGGCCGGTCAAGGGTCACGGGCGCGCCGGACCATGGCGGGGCGGCGACTGGCCGTGACTCATGCCGTGACCGTCGGCTGGGCGCGTGCACGCGCCCGCATCCCGGATGCTGCGTTCCATGAGGGGCCTCCCTGGCCTTGCCGACGACTCGCCGCGCCCAGGGCCCAGTGGTGATGAACGCCGTTCAGCCGAGATCTCCATCTCGCATCGGTCGCACCCCGTCTGCCGCAAACGCGAGAAACGGTCGTCGGTCAGTCAGATCGTGATGGAACACGATGCGCACGAGGATGTCGACGTCGGGGCGGGAAGCCATGATTTGTCGAAGTGGAGGCTGAGCGCCTCGGATGACGGCCGGCCCTTCGAACGCAGGTTGCGCGGGTTGCTCGT # Right flank : AGGCCTTCGCAGAACGCCCGCCAGCACCGGATTTTGGCCCGCATTTGCGAGCGCTCCCGGGCCGAAGACGCGGCGGGCGGCAGGGTGCGGGCAGGGACCGACAGCGGGGTCATGCAAGTGCTTGTCAGACAGGCGCTTTGCGCTGCGCGAGCGCTCACCTGGGGCGGCCGCCAGCACCACAGCGCTCGCGGCTCCGCGGCAGGCCGTCATGCTGCGATCAGACGATCGTCGGCACGCGCTCGATCGGCACGAAGCTGCGCTTGCCGAGGCTCTGCACGCGCGGCTCGACACGGTCTGCGGGGCCGAGGTCGACAATCAGAACGTGATCCTCGGACGGCGCAATCGTGTCGGTGACGCGCGCCATCAGTTCGGCACGGCGCATGGCACCAAGCCGGCACTGGAACACCGACAGCTGCATCCACTCGCCGAAGCCGTTCATCAGCTTGAACACTGCGCGCCAGCGCCGCTCGTCGGCGATGTCGTAGGTCACGAGGATCAGG # Questionable array : NO Score: 2.93 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCGAGGCAGAGCGCCTCGGATGAC # Alternate repeat : GCTTCAATGAGGCCGAGGCGGAGCGCCTCGGATGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-13.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //