Array 1 1890222-1892829 **** Predicted by CRISPRDetect 2.4 *** >NZ_AFQU01000001.1 Streptococcus sp. oral taxon 056 str. F0418 Noncontiguous_Finished_Chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1890222 36 100.0 30 .................................... GCCATAGCTAAAATTGCTCCTGTTTCAGGA 1890288 36 100.0 30 .................................... TTGAATAACTCGCCAAATTCTTCAAGGACC 1890354 36 100.0 30 .................................... TGATTCTGCATATCTCATCTATACAGAGCT 1890420 36 100.0 30 .................................... AAATACAGTCTTCTTTAACCGACGTAGCGT 1890486 36 100.0 30 .................................... ACCAAATCGTTTGTGCCCCTACGATGAAAC 1890552 36 100.0 30 .................................... AATCCCTCTGTACACTTCGGACACAGTCTG 1890618 36 100.0 30 .................................... ACAAGGCGTTGCTTGTATGCTTCTGCGCCT 1890684 36 100.0 30 .................................... TGAGCCTTTTGGTGAGATGTTCCAGTGTCT 1890750 36 100.0 30 .................................... CGGAGTTAAGATATACTCCACAAAACCAAG 1890816 36 100.0 30 .................................... TTTACAGATAAGAATAACGAACTGGACTAT 1890882 36 100.0 30 .................................... GATGGATATGCCAAATACTGCCTTTGGTTA 1890948 36 100.0 29 .................................... GTGAGTTCCCGGGGATCTTCAACAGGGCG 1891013 36 100.0 29 .................................... ATGAAACTAAAAATACGATGATTACCAAT 1891078 36 100.0 30 .................................... CGAGAATTGCCATTGCATGATAGAGAAGTC 1891144 36 100.0 30 .................................... ATGAGATAGAGGGTAAATTCGGTCACATAT 1891210 36 100.0 30 .................................... GATTATCTTAAGACTCATATCATGCCTGAA 1891276 36 100.0 30 .................................... TTTAGGATCTATTGAAATATCTCGTAGAAC 1891342 36 100.0 30 .................................... AGTGTTTGGGCTATACATATGGCAACGTAT 1891408 36 100.0 30 .................................... TGGTCGTGAGTACACTCTACGTTTTGGGAT 1891474 36 100.0 30 .................................... AGAAATTGGGATTTACAGTTTGAACATTTT 1891540 36 100.0 30 .................................... GCCACCACTCGCTGTCTTTGCTTGTAAGGT 1891606 36 100.0 30 .................................... TCAAGAACGGAAATTTCCATAGTATAGTAC 1891672 36 100.0 30 .................................... CATCGATTTACCCATTCGCAACTTACACAC 1891738 36 100.0 30 .................................... AACGAATCATTCATGACTTGCGGACCCTAC 1891804 36 100.0 30 .................................... TCACGCATCAAGCGATTGTATAGACGTTGC 1891870 36 100.0 30 .................................... TTTACGAGAAGAAATTATAGCTCGAGATCT 1891936 36 100.0 30 .................................... ATATTTAGCTATGAAGTCGAGGTGATTTGA 1892002 36 100.0 30 .................................... CTTGAAATTGCAATCGGAGGCACAAGTGTT 1892068 36 100.0 30 .................................... GCCCAGAACTTCATCAGCAACGACAAACAC 1892134 36 100.0 30 .................................... AAGTTATTCGGTTGTTCAAAAGTTGGGAGC 1892200 36 100.0 30 .................................... TGTAATTCCTCTCGTAAGGATCTACACGCT 1892266 36 100.0 30 .................................... ACATCAAGACTTTTGCTATTATGTCTCTAT 1892332 36 100.0 30 .................................... TTAGCTGCTGGTAAAGTGGACATGCAGTCT 1892398 36 100.0 30 .................................... TTGACAAAAGCTATCGCAACGGGCTGATAA 1892464 36 100.0 30 .................................... AAAGGATGAGTCAAGTCAGGACCTAATTCA 1892530 36 100.0 30 .................................... TTGACAAAAGCTATCGCAACGGGCTGATAA 1892596 36 100.0 30 .................................... CGAGGTATTGCAACGCATGTCTAATAGCAT 1892662 36 100.0 30 .................................... ACGCATAGCCAATGACCATACGCTAGTTCC 1892728 36 94.4 30 ...........A..T..................... TTGCTTAGTTAAGAGCCAATCGCTATCATA 1892794 36 91.7 0 .........................ACC........ | ========== ====== ====== ====== ==================================== ============================== ================== 40 36 99.7 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : AACAATTAAACGAAAAACCGGAAGTTAAGTCTATGATAGAAAAATTAGTTTCAACTGTTGCTGAGCTAATTGCATTTGAATGTTTAGAAAATGAGTTAGATCTAGAATATGATGAAATCACAACTTTAGAGTTGATCGATGCGCTAGGAGTCAAAATCGAAACACTGAGTGACCTGCCTTTTGAAAAGATGCTAGAAATTATCCAGGTTTTTAAATATCTTTCCAAAAAGAAACTACTTATTTTCATCAATGTGACTGCCTATCTATCAAAAGAAGAGTTATTAAATCTGATCGAGTACATCCAACTCAATCAACTGACTGTCTTATTTGTCGAACCTAGGGCAGTCTATGATTTACCACAGTATGTACTGGATCAAGACTATTTCTTAAACATGGAAAATATGGTATAATAAGAGCAACAATAGGAACCTGATGAACTGAAGTCTAGCTGAGGCGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : CCAATTTCAAAACTGCTCTCATGTTTTTGTACTCTCAAGATTTAAGTAACTGTACAATTGCTAAACAATCCTCCTTACCATGTAGGTCCCATAGTTAATCTAGAAATACTAAAATAATTTCCACTTTACTAATAGATATGATATACTAACAGTAGCAGGAGAGCTTTCGCCCTCGGCTACCATTAGTGCCTCATTTGAATCGTTTAGCTTTGCGTGGCTTGCGTTCTTTTGGCTCTTTCTTTAATGCTATAATCATGCTAGCTGTTCCGCTAAGTAGCGAACCAACTGCTGCGATAACTACAGCAATCTCAGAAAGTTGTATACTTATTCTTTTATCCCCATATTTTTCAAACGATTCAAATATTGGGGAATATGGATTCCATTTTCTATTGAGATTTTTTTGATTTAGACTTAATGTGATTTAGTTGAATGGAAACTACTATTTAGTTAGTAAAATAGATAGACTATACCCTAAAAATTAGCTACAATAATCTAATTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //