Array 1 2368559-2361770 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017766.1 Methanobacterium subterraneum strain MO-MB1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2368558 30 100.0 38 .............................. TTGAGTTCTACCCAGAGGGCAGTGTGGAACGGTTAGAT 2368490 30 100.0 35 .............................. ACAAAAGTAGAAATATAACCCGGTAAGCCAGGGAG 2368425 30 100.0 37 .............................. TCCATTGATAGAACTAATGGATATTGACACTTTAAAT 2368358 30 100.0 36 .............................. CAAATATGCTACTTTTGATGATTATTACGCTAATGC 2368292 30 100.0 37 .............................. TGGTTTATCCCCTCCAAGGATGTTTTATTCAATGTTT 2368225 30 100.0 36 .............................. GCGTCAAGTCCACAACCAACATGGTAACATCTCTAT 2368159 30 100.0 37 .............................. TTTAACATTTAATGTGAACCTTTTACTTGCTTTATTC 2368092 30 100.0 37 .............................. AAGATACGGAAAGGCCGTACAGTTCAAAAACTCCCTG 2368025 30 100.0 36 .............................. AATGATGTCTTTGTATTCTTTTATAAGCTCCTTAAA 2367959 30 100.0 36 .............................. ATTAAACTCGATAAAAAAGAATACAATAGTAACGAA 2367893 30 100.0 36 .............................. TGTGATTGTTTGCCGTTCCCATGAGGGTGTGTCTTC 2367827 30 100.0 37 .............................. CAATAAAAAACAGCATAAACCCCACAAACACACCCCA 2367760 30 100.0 36 .............................. AGTGTTCACCTCTGTATTATAGTAAAAATGCAATAA 2367694 30 100.0 36 .............................. TACAATGTGTCAACACGTGTGACTAGCAGCAATATT 2367628 30 100.0 36 .............................. AAAAGTCCCAGGAATGGGACCTTGACACCTTAATGA 2367562 30 100.0 36 .............................. TTTATTGTCTATGTGTTCAAGTAATGGCATTAATAG 2367496 30 100.0 37 .............................. TCCTTCCCCTTGTGTGATTCCTTCACTTTCAAGGTCG 2367429 30 100.0 37 .............................. CTTGTTTCGGTGTGTTCTGTGGGTTCGCCTAATGCGA 2367362 30 100.0 36 .............................. TTCTGTGATTATGCCCTTCAAGGAACAAATTAGCCC 2367296 30 100.0 36 .............................. GAATGGAATTAATAGAATTATTAGAGGGGGAATAAA 2367230 30 100.0 36 .............................. GATGATGTGTCAATGAAAGACTATTGGGTTGAAAAG 2367164 30 100.0 36 .............................. TATAATTATATTATTAAAGACAGCAAACATGGTCAA 2367098 30 100.0 36 .............................. CTAGTTTGTTGGCAACGGTCATCATGTCTTCATAAA 2367032 30 100.0 37 .............................. ATGGCTGATTGGTACAATAGCCCAAAACATGCCAAAT 2366965 30 100.0 36 .............................. CTTATCCGATATCAATTTCTTAGAATCCGAAGGGAT 2366899 30 100.0 37 .............................. ACATACTAAGCAGTGAAAGTCAGGGGAAAAAACCATA 2366832 30 100.0 36 .............................. TATTGTTTAAAGTCATTAAAGCGGGTTCTTATTAAT 2366766 30 100.0 35 .............................. GAAGAGACAGAAGAAATTCTCTTAGAGATTGAGGA 2366701 30 100.0 36 .............................. TAAAAACGGCACAACAATAAGTGATCTAATAGATCA 2366635 30 100.0 36 .............................. TTTCATCCAGGGAAATATTGTTCCAGTATATAAGGA 2366569 30 100.0 36 .............................. ATCCACGTTGTTTGAAGAAGGCTTTATTTTGTTCCT 2366503 30 100.0 37 .............................. GGGTATATGGGAAATATTATGTGGTTACAAATGATGG 2366436 30 100.0 35 .............................. AAAAGACATAGGGATAATTATATTTGGATTAATAG 2366371 30 100.0 36 .............................. AATTATGACTTACACTAAAAAAGGCGATAATAATGA 2366305 30 100.0 36 .............................. TCATTCAGTAAGCCAACCAACAAAGCTGTTAATTAA 2366239 30 100.0 37 .............................. TATAGCACCCCCTCATACTCTTGAAACATAAATCAAA 2366172 30 100.0 36 .............................. CTACTAAATTCTTCTGTAAATTCACACCCTTCACTT 2366106 30 100.0 36 .............................. TATGCAATTGTATTCCCTGGACAAAACGCTAAGACA 2366040 30 100.0 36 .............................. GAACTAGGAGTGGACGAAGCAGTTGCTATAAACGTC 2365974 30 100.0 35 .............................. GTTTTGGCATGAAGTTTTGTCCTGGGCTGCTGTGG 2365909 30 100.0 36 .............................. ACAGGTCACAATTTCATATTCTCCCAACCCTGTTTT 2365843 30 100.0 35 .............................. TATGGAACTAAGGCAGGACAAAAACAGGAAATAAT 2365778 30 100.0 36 .............................. TACGGACTATGAGAAAAACACGACTGTTTTATTGTG 2365712 30 100.0 37 .............................. CATATCTGACATACTTCATAAGACATCCTTTCACCCC 2365645 30 100.0 36 .............................. CAAAGTATGAATGTAGAACGCCGGGAACGGATATGC 2365579 30 100.0 36 .............................. CCATTTGGGGTAATTGGAAGTCCAGTTGCAGTATCA 2365513 30 100.0 36 .............................. ATTAATGAAAACTTCTAATTTACATCCACAATCCTT 2365447 30 100.0 36 .............................. AGAGTTACTTTTTGTACTACTACTTCCCCTCCACTG 2365381 30 100.0 37 .............................. TGTTTTAGGTGTTTTGTTATGTGGAATAAGGAGTAAT 2365314 30 100.0 36 .............................. TTAGATATGTATTAATTTTAATTGTTTTTTTCATGT 2365248 30 100.0 36 .............................. ATCTCAGTGGCGTTAAGGTTCTCCTGGTTACGCAGG 2365182 30 100.0 36 .............................. ACACTTCAACCTCGAAAGGTCTTAAAACACATTCAT 2365116 30 100.0 36 .............................. GTAGTTCACCCATCGCCTTGTATTCCCTAGCTCTGA 2365050 30 100.0 36 .............................. TTGCTATTATTTTCTCGGGGCTGCTGTCGTGTACGG 2364984 30 100.0 36 .............................. TGTTCAACCTTCACCTGATATTGAAAAACTAATGAA 2364918 30 100.0 36 .............................. GACAACTAGAAAACACCAGTCTTGGATATTTGAATA 2364852 30 100.0 37 .............................. TTACTTTCTTGTTAAAAGCTTTTTGCTCTTTATATTG 2364785 30 100.0 37 .............................. CTTGGAGATGTGCATCGAGGAAATCCCTCATGTAACT 2364718 30 100.0 38 .............................. TAAAGAAAACAGATAAAAAGGAATACGTAAGGGTTAAG 2364650 30 100.0 37 .............................. ACATCAGAACATGGAGTACGGTCTGTTGTTAATTACA 2364583 30 100.0 36 .............................. CGATACATGTCATGTTATCATACCTCTACTTTCATT 2364517 30 100.0 36 .............................. TTAGTAATTTTAACTTTAGTACCTACCTCTAAATGA 2364451 30 100.0 36 .............................. AAAAAAGATTGAAAATTGATAAAAAGAGTTCAGTAA 2364385 30 100.0 36 .............................. ACCATTATAATATATTATAGGTCAAGATCCTCAGAC 2364319 30 100.0 36 .............................. AACACTATTAAACACATTATAGGGTAGGGGTGCTTA 2364253 30 100.0 36 .............................. CTGCCAGTCTCCACATCAGCGGGGCGAATACCGCCG 2364187 30 100.0 36 .............................. AAATCAAACCGTTTAAGACTTAATCTCTTCGGGTTA 2364121 30 100.0 36 .............................. TCATTAATACTGTGTGGTAGTTAGAGTAATCCACAA 2364055 30 100.0 38 .............................. ACGCTTGTCATCACAGCATGGCTCGAAACACGATCTAG 2363987 30 100.0 36 .............................. ATCTAATTTTATGATTTATCATCTTTTCCAAGCCTT 2363921 30 100.0 38 .............................. GTGGGTGTTGTGAATACGATAGTTGTTAGATTATCCGT 2363853 30 100.0 37 .............................. TGTTTGAAGCCTTCGTCACTTATTGCATCTTTAACAT 2363786 30 100.0 36 .............................. CCACACACCCCGGTTAGCTACTTGGGAGCTTGTCAC 2363720 30 100.0 36 .............................. TTTAAGAAGGTCATAATGTTCACTGAGAAAGTGAGC 2363654 30 100.0 36 .............................. CCACCCCCTAAAATGATTCTATCAGGTTTTAACACA 2363588 30 100.0 37 .............................. GGTAATCGCATAGTGTGTGAACGTCACTGAAAGATAC 2363521 30 100.0 36 .............................. TCATTATTATTAGTTACTAAGTTTACATCAAAAGAG 2363455 30 100.0 37 .............................. GGGTCTGTCTGGTGTGGGGTCTAAATCTTTATACTAG 2363388 30 100.0 37 .............................. AAATAAGAACTTACTAAGTATGCTGCAGCTTCTGCAG 2363321 30 100.0 36 .............................. TTTTTATAATCTTTAACTACTTTAGAAGGTAGTGGG 2363255 30 100.0 36 .............................. ACAATTCCTCCAACATAATCTCTTCCAGTTATATTA 2363189 30 100.0 37 .............................. TAGTTAATGGAGGATACAAAGTAATTCTACACGTTGT 2363122 30 100.0 35 .............................. TCGGAAGTATCCTGAGAAGTCAATGAACCATCGGA 2363057 30 100.0 37 .............................. TATTAGGAATATTATCATCTCCGTTTCCTTTTTTAAC 2362990 30 100.0 35 .............................. TCTCCTTTTTGTAAAATACTAACCTCCAACACAAC 2362925 30 100.0 35 .............................. AAACAAACTTTGAAATGTCCACTGGCACAGCCCCA 2362860 30 100.0 37 .............................. ATATAATTAGTCATCTTTTTTCTAACCTCCATGCACT 2362793 30 100.0 37 .............................. TTTGGTATTCTTTAAAGTGGTGCAATACACTTAATGC 2362726 30 100.0 37 .............................. GGCAACGATTAAGAAGTTATAATGGTATACGATTTAC 2362659 30 96.7 36 ........................C..... AAGAATTTAATGATAATGTAATCATGGTGAAAAATG 2362593 30 100.0 36 .............................. ATATGGCTATTTGCATAATTAGGACCTATATTATTC 2362527 30 100.0 37 .............................. CGCTACTTTGACAATATATCAAAACCATGAACACTAG 2362460 30 100.0 36 .............................. TACACAATGAAGAAGTACAGGCAATCATGATTAAAA 2362394 30 100.0 36 .............................. AAGATCATGCAGAAAGAAATAGCTGGAGCATTATCA 2362328 30 100.0 37 .............................. ATACAACAAACAAAATTTAAGACAGGAATCTGCCCAG 2362261 30 100.0 35 .............................. ATTACGATGTAACAATCAAAGGGAAACTTATGTAG 2362196 30 100.0 36 .............................. AAAATTAAACCCTCCAGAAATCAATAACAGCAAAAC 2362130 30 100.0 37 .............................. AATAGATAATTCACTATATGATGAAGAAATTGAAATC 2362063 30 100.0 36 .............................. CGCAACAGTCCACCGGCTCATCCGGGAACTGGTAAC 2361997 30 100.0 36 .............................. CACTAGCAGACAATGACGACCCGGAAGCAGTTGCAA 2361931 30 100.0 36 .............................. GTGCTTACGCCGTGGGAAATAGCACACCACACATAC 2361865 30 100.0 36 .............................. CCTTGGACGGCATATTGGTGCAGCTGCTTTGAAATT 2361799 30 90.0 0 ..................C.A....T.... | ========== ====== ====== ====== ============================== ====================================== ================== 103 30 99.9 36 ACTAAAATCAGACCATTTTGGGATTGAAAT # Left flank : GCGAACTTGTTGATATAAAAAAGAATTTAAAAGAGATCATGAACAGAAATGAGGATTCAATAATAATTTACACCCTCAGAACAGAAAAAGCAATGAAAAGAGATGTGATGGGAATTGAAAAGGCACCCATTGATGGGATATTATGATCAAATATTCTTTTTCACCTTTAACCTTTCTCATCTATTTTTAATGAACCTGATACCTCATAATTAGGGGTCGTTTTTGAATGAGTTTTAAGTGAACCTTTAAAATAACTTAATTTTATTTTATTCTCTGATCGATAATTATTCATTTTATTGTTGTTTTGTTGAGTCATAGCTCACCTAAAAGTGTTGAATGTTAATTATGGATGTGGACGATGAATAATTTCATGAAAAATCTTTAATCTTTACCTCGTCTTCCCATATAAAAGAATTGACAAATCACGGAACGACAAATTTATGTATAAAAATGGGGAAATAATATTAAATATTGGGCAAAATAGGGCAAATTTCGGCCCT # Right flank : GCCCTTTCAGGTCTAAATTCATCAAATAACTTTTTGTAACGAAATCCCTATCCAATGAATTAACACACATAATTTTAGACCATATGGTCTAGACCACTGGGTTTATATGTAATAACTGCTATACACTTAAAATCGTGAATATTAAACATTAGGGGAGATTGTTCAGGAACTATACTACTTGGCATTTGAATAATGAGTCATAAGGGGATTAAAATGAAAGAAAAATCATTTAAAAGAAAGAAAGAACTTATTGAGGCTGCTTTAGATGAATTTACATCCAATCGCTATGAAAATGCTTCTTTAAATAAAATCATCAAAAATGCAGGCATCAGTAAAGGTACTTTTTACTATCACTTCCAGGACAAACAGGCAATTTACATTTTCCTGCTTAAAACAGCTTATGAAAAAGAATGGGAATACATTAATAAACGTGTTAAAGAACGCGCCATAGATTTTGAAGGAAAAGACTTTTTTGAAAAATTCAAGTTACAATCTCAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTAAAATCAGACCATTTTGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //