Array 1 3455-54 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMIH01000002.1 Anditalea andensis strain LY1 Contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 3454 30 100.0 36 .............................. CGGCCTGGGGATGGTTGCGACACTAGATTGATAAGG 3388 30 100.0 36 .............................. ATACTACCCTCGCGGCTGCATTCCCGTCCACGTCCT 3322 30 100.0 36 .............................. TTAATAATAGGATCTATTTTTTTCTTTGGTTCACTT 3256 30 100.0 37 .............................. AACGCCCATGCGTGAACCTTATGTTCTGCGGAACTGC 3189 30 100.0 35 .............................. AGATAAGATAAGCCGTATTGACTGGCACCAAACTG 3124 30 96.7 36 T............................. CCGTAATTCTGGTTGGCACCAAACTGGCCTCTGTAT 3058 30 100.0 37 .............................. ATAATTTTCATTATAGATCAGCGTAAACTTTGCGTGT 2991 30 100.0 36 .............................. ATAAGTGCCTACAGTTGTCAAAATCTGACAAGTCGC 2925 30 100.0 37 .............................. AAAAATGCCTGAGGTGTGGCGAGGTCTGGGATTTTGA 2858 30 100.0 36 .............................. TCTAGAGATTGGGTTCCGAGCAGAAAAGTAGAAAAA 2792 30 100.0 35 .............................. AGGCAAATACGTCTTCATGAAGGAACTGATAGATC 2727 30 100.0 36 .............................. TATCAAGAATGAATTTTTATGAAAAAAGCACCCAAC 2661 30 100.0 35 .............................. TGACATTGAATAAATCCTCAACATTAGGATCTAGC 2596 30 100.0 36 .............................. TCTACATAGGCCACTACAGGTTTTTTAAGATTGGCT 2530 30 100.0 35 .............................. GATCCAGGAAGATATAGAAAAAGACTGGTTTGACC 2465 30 100.0 36 .............................. CATAAAGTAGTTATTTAATGATTTACGCAGTAGCGG 2399 30 100.0 36 .............................. CTGATAGATAAACTTTGGGCGAAGAGTCCAAATGGC 2333 30 100.0 36 .............................. TTAGCAGCTGGATTAGGACTGGCTTTCGGTATTAAC 2267 30 100.0 36 .............................. AACCAAGTGGCTTTTCAATTGAATTTTAGTGACTTT 2201 30 100.0 36 .............................. CTCTGTCAAAATCCCCAAAAGACCTTATGTCTTAAG 2135 30 100.0 36 .............................. GATAAAGTGGCCATCAATATAGATAATAAGGATAAT 2069 30 100.0 36 .............................. TCGTCTGTGGCTGTTAAAAGCAATTTGGTTATTTTG 2003 30 100.0 36 .............................. AAGGAACTAAGGATGCTTAAAGTTAGACATGTAAAG 1937 30 100.0 37 .............................. AAAGCAACTTGACCAGATTACGGATGATTTCATCAAG 1870 30 100.0 37 .............................. TTCGTATATATACATTTTTTCAGGGTAGTCCTCCATT 1803 30 100.0 36 .............................. GCATTAAAAAAACTGGAGAAGGAAAAAAGCACCATG 1737 30 100.0 37 .............................. TTGACGATGATGTTCAATACCAGGTCTTCGTCCCTTA 1670 30 100.0 37 .............................. CGCCGTTGGTGACAATGCTTATCGGATACAGTTCTGT 1603 30 100.0 37 .............................. TCAAAGGTCTGGTGCTGATCTTCGATGCAGACACGGA 1536 30 100.0 37 .............................. ATGATCCGGGGAAAGGTCTGTATATCCTTTGCCCGTG 1469 30 100.0 36 .............................. TGTATATATGACGTTTTCTAGTCTTCTTTCCTGAGA 1403 30 100.0 36 .............................. AAAATTGGTGTTTCACTGCCAATGAATAAACCTTTA 1337 30 100.0 36 .............................. TATTGTTGCGTGTAGCTGGTTTTCGTGAGTTCGCTT 1271 30 100.0 36 .............................. TCCTGTAACCAAAGGACAGTCTTTTAACCATTGAGG 1205 30 100.0 36 .............................. AATGTTTGATTTCCGGATAATTTAATCCGGCAGTAT 1139 30 100.0 36 .............................. GGGAGTCGGTCTTTCTGTTGTTAATATTTTCATTTA 1073 30 100.0 36 .............................. CTCCTGGTATATCCTCAGTGCCTTGGGATCTATGGT 1007 30 100.0 36 .............................. TTAATTGGAGCGTTATTATGCCTGGTAGGGGCATCC 941 30 100.0 36 .............................. TCAAGTTTATGATGAGGATTATGAGGAAGATTATCA 875 30 100.0 36 .............................. GCATATTGGGAGTTTGGAACTGGTTTAAGCGCAAAG 809 30 100.0 36 .............................. CTTATTGTAAATCCTTACGCCACCGACAATTCCAAC 743 30 100.0 35 .............................. AGGACAAATAATATATAAATTTGGTTTGTTTGTTA 678 30 100.0 36 .............................. TCTTTTTCACATTTGCATCATCCAGAGCATCCAACT 612 30 100.0 36 .............................. ACAGCATTTCAATGTGATCGAGCGAGTGTTTCGCTG 546 30 100.0 36 .............................. TTGAGAATTAAGAGCCCTTTCTAAAACCTTAAAGTT 480 30 100.0 36 .............................. TATCGATGTGAACGGACTTAGCACCACCACGGTACC 414 30 100.0 37 .............................. TCATTCAGTAAATATTTAAATTTAAATAAAGGTAATA 347 30 100.0 36 .............................. ACCAATCATAATGATAATAATTCCAAGCAAAACATA 281 30 100.0 36 .............................. AGCAAAACATATAAAACGTATCTGTTATAATTGTAT 215 30 100.0 36 .............................. ATTAATAACCTCTCTTATTGCAATTACAATAAGAGA 149 30 100.0 36 .............................. AGAACTGTGAAAAGATATGTGATCATTATACTTTGA 83 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 52 30 99.9 36 CCCTTAATCGCACCATAGAGGAATTGAAAT # Left flank : ATTAATCACTCATCTTTTATAAATTGAATTTATGTATATAATATTGGTATATGATATAGGAGAAAAAAGAGTGGGAAAAATGCTGAAGTTGTGCAGGCAGTATTTAAATTGGATCCAGAATTCGGTGTTTGAAGGAGAGATAACAGAAGTAAAGTATAAAGAACTGTTGATCAAGGCCAAAGCCATCATGAAAGAATATAAAGACAGTCTGATCGTGTTTAAAAGCCGGGAGGAAAAATGGCTGGAGAAAGAGGTGATCGGCCAGGAAAAAAACGATCTGGATACCTTTATATAGTTGTCGGTACATCCGCACATTTGGATTAAACAGGGTCAATGGAATTTATATGCCGAATAATCAGCATAATATCAGCACTTTATAAAGTTGTCGAACCTAAGACAAAAATCGGCTATAAAAGACCGACGATAAAAAGGAAAATTTTCACTAAATTGAACGGCCACTGGGATCAACTGAGGCTGATTATACCCCAAAAACCCTGCGG # Right flank : TGAACAATAAGGTTATCAGACAGCACCGTTAGAGAGGCCCTTAATCGCACCATA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTTAATCGCACCATAGAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA // Array 1 31608-29140 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMIH01000001.1 Anditalea andensis strain LY1 Contig_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 31607 30 100.0 36 .............................. GATCCATGCCCTCTACTTCTGAGGCGGTACGTGCCA 31541 30 100.0 36 .............................. AAGTTCTTACCCGCCTTCTGGGCTTCCTGCATCGCA 31475 30 100.0 36 .............................. CATGAATTTCTACACCGTTATCCCTCATGTATTTTG 31409 30 100.0 36 .............................. TACTTCTGGGAAATTTAAAGGCATTTCTTTCTTATT 31343 30 100.0 35 .............................. AAACACAATATATTTTTATCATATCGGCAGTGGAT 31278 30 100.0 36 .............................. TTGTTTAGTGGCTCCTATATCTTCCGTCTTAGGTAG 31212 30 100.0 35 .............................. ATAGCTCACGCTGTAGATACTGTTTGATTTTGACA 31147 30 100.0 36 .............................. GAGGCAACAATGTCAATCGCCTGGGGGTTTATGGTA 31081 30 100.0 36 .............................. CGGTCCAGGGCATGCGCGTTACAGACTCGCGTTCCC 31015 30 100.0 37 .............................. CAAGCTGCGCAAGCTCAGGGCGCGTACTAAGATCGTA 30948 30 100.0 36 .............................. GCACTACCAGACTGGATTTTTGCTGAAGCTGAAGGC 30882 30 100.0 36 .............................. TTCTTGTCCGTGGCCCATACGTACCCCCTTAATTCT 30816 30 100.0 37 .............................. AGGCTTACGAGGAGGGCGAGGACGGGCGCTATTCATA 30749 30 100.0 36 .............................. CATCCTTTTCGTACCTGCTCAGTAGCGTGCAGTATT 30683 30 100.0 37 .............................. CTTCTATGACCCTTAGACCGGGGAAGTTTTCCTCTTC 30616 30 100.0 35 .............................. AAATTAAGGTTGATATTTGCTGCACTTATCTGATC 30551 30 100.0 36 .............................. GGGGAGGGTTGATCATGCCGTGGTTCATGTAGAACT 30485 30 100.0 35 .............................. AAGAATCATCAACATACATGCTGCATTTTACGAAG 30420 30 100.0 36 .............................. AATTTCCAAAACTGCATGTAGCTGTCGCAGGACTCC 30354 30 100.0 35 .............................. ATTGAATCATTTCTCATGACACAATTGTCATAATT 30289 30 100.0 36 .............................. TCGAATGGCTGGACAAGCTGTCCGAAATGCGGGACA 30223 30 100.0 36 .............................. TGGTCTGGTTTGATGAGTATAACAACTCTATCGACT 30157 30 100.0 36 .............................. GGGATTGCTGAAGTACAGCGAAGATTTTAAGATAGA 30091 30 100.0 36 .............................. GGTTTAAGAAGCTATGGGTGGTCAAAAACTGATAAA 30025 30 100.0 36 .............................. TTTTGAAAATCTTTCCGCCTTTGCTTTAGCTCTCTC 29959 30 96.7 36 ..................C........... GCTGGAACGCCTGGCATGAAAACATATGGAACATTG 29893 30 100.0 37 .............................. TCGGGGTTGAGTCCTAGTTTGCGCTGTAGTTTCTGTA 29826 30 100.0 34 .............................. TTTTTTAGCTTATCTACTGGAATAGCGTACTTAT 29762 30 100.0 36 .............................. TCAGATCACCTTCGCCGCGCCAAGCTTTCATAGCAG 29696 30 100.0 37 .............................. GAGGAACAAAAGCAACATACAAGGCAAGCGAAAGATA 29629 30 100.0 36 .............................. TATAGGGTTATTTTACATTTTAAAGATTGTTTGAAC 29563 30 100.0 36 .............................. ATTGCAGGTTCAGTTTTTACCTTTGCATCGTGGTCG 29497 30 100.0 36 .............................. CTGATAGCAGAAAGAGAAACAACAAAACCTTATCGT 29431 30 100.0 36 .............................. TTTATCAGGATCCTCATTGACATCCTTAAGTCCATT 29365 30 100.0 35 .............................. TTTCAAGGGTTTTAATTGCCCCCTCTCTAGGGTCT 29300 30 100.0 35 .............................. ACAGTTACCTCAATCATTCTATTAGGTGACTTTTT 29235 30 100.0 36 .............................. TAGCTTTCTATGTAATTGATTTCGGTTAATTGTGAT 29169 30 96.7 0 .........C.................... | ========== ====== ====== ====== ============================== ===================================== ================== 38 30 99.8 36 CCCTTAATCGCACCATAGAGGAATTGAAAT # Left flank : CATAGAGGAATTGAAATAAGGTTGCTTAGGTCCTCACAGGACTATGTCCAG # Right flank : AATAGCTGCAAACATCTTCAATGATGTTAAAACAGTACCAAGCGGGAATTTTATTAGACTAATTAATAAATAAATGAGAAGTGGCTTGCGCTGACGATGTTTTTATCAATGTTTTGGTAAGCTTGTAATTGATAACAGTCAACTTATTATCATCAAGTGATGCTGCAAACTTCATGACTTAAGTATGATGGAAGGAATTATTATTCACTAAGCAAAAAATATTTATCAGCAAACTAAAGTTACCTTATAACTAACAGGGCAATATCAGACGACACTATCTCAAAAATAGTAAGCATACTTAGTATCGTATCATCCAAATCTGATAAGATGCTAAGTATGCTACTGACATTTGATTTTGGATTACAAAATCCATCCAGAGCTTTTACTATGTTTAATTGGCTCTGTTCAATACATCTTCATTGCCCAAATCCTTGGTAGGAGCTGACTTAACGGTTCGCTTACCAAAATTGTAAACTAATCCGAAATCTACCCGCCTGGTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTTAATCGCACCATAGAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 1 3177-703 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMIH01000003.1 Anditalea andensis strain LY1 Contig_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 3176 30 100.0 37 .............................. CTATCAAAGGAAAATAGATTCAAATTAAATCCGTTTT 3109 30 100.0 37 .............................. GATGGTACAGGTGTGTAATCTGTCTCGTTTTCAGAAA 3042 30 100.0 36 .............................. CCAAACTTGGAAGTAGGTCCTATTACCGGGATCACG 2976 30 100.0 35 .............................. GGAATTCAACGCTCAAAAAGTTTACTATTAAAATG 2911 30 100.0 37 .............................. ATCGCCTGCTTTCAGTTCGCCTTCGCCGCGCCAAGCT 2844 30 100.0 36 .............................. GAAACGGGAGATAGATATTTATCAACTAACCAAATA 2778 30 100.0 37 .............................. GAGCCAACCCTCGTTTTTCCCTCTGAATCGTACCTGA 2711 30 100.0 35 .............................. CAATAAGTGGTTCGGTAGTATAACCGCTGAAATAA 2646 30 100.0 36 .............................. CCCCGATCGTTGGGATGGTTGACATATCCCCCTTCA 2580 30 100.0 37 .............................. AATCATGAAATAGACAACGAAAAAACAGATGATCTAA 2513 30 100.0 36 .............................. TTAGAATTGATAAAACTAGCATGGTTACAGATATGA 2447 30 100.0 36 .............................. ATGCTGATTTTTAAAAGTTTAACATCAAACAAATTA 2381 30 100.0 35 .............................. AGGATGAAAGCGATCAGTACGGCAATAACTTCTCT 2316 30 100.0 37 .............................. CTGAAAGAAGTTGATAAAATTATTTATAAATAACCAT 2249 30 100.0 36 .............................. TACCTTGTTCTCGCCGCGTATTATAGGTTTATGGCT 2183 30 100.0 36 .............................. TATCTATGGAAACGAAATACAAGGTGTTACTGTAGG 2117 30 100.0 37 .............................. AACAAAACTTTAATTGATAGTGTAATCTTTTGGTTGT 2050 30 100.0 36 .............................. TCAGAGGTGGCTAATTCAGAACCTTCCCCTCCCAAA 1984 30 100.0 36 .............................. TATGGAATATTGAAATCAAAATTTATACCGTCAAAG 1918 30 100.0 36 .............................. GTGGTTGAATCGATTAACGTCGAATGTCGTATTATC 1852 30 100.0 34 .............................. GTGAAGGGTTTGACAAGAAAAAACTTGGGTTAGA 1788 30 100.0 36 .............................. TGAAAAATTGCAATTTTTTATTGTGAAGTTTCTTAG 1722 30 100.0 37 .............................. GTGAAATTAAAAGGCAGATTAAAACTCTGTTGGCTTA 1655 30 100.0 36 .............................. AGCATGAAGAGACTATCAACATGATTATAGATGATC 1589 30 100.0 35 .............................. AAATAATTTAATAAATGATCAGAAAAGCCGTTGAT 1524 30 100.0 37 .............................. TTCCCTACTCCAAAAACGAAGCCATCAAATGCTTCTT 1457 30 100.0 36 .............................. TCTATCTAACGGGAGAGTACAACTAAGATCCTTAGG 1391 30 100.0 36 .............................. ATTATCTTAAAATCTCTTGGGTTAACTAACCTTATC 1325 30 100.0 36 .............................. GTCTCTTTTCTATAGCTTCGACTTGGGCATCATAGA 1259 30 100.0 36 .............................. TTGATTGCCTTATTTCAAGACTTCCCTGAAAAGAAA 1193 30 100.0 36 .............................. GAGGACAGACCTTTATAGGTCCCCTGGAATTTTTGA 1127 30 100.0 36 .............................. GATACCCATCTATGGAAAGTCCCCTGATGGTAGAGC 1061 30 100.0 36 .............................. TTAATACAGCTGGAATTAAGTATGTTGCATTAACAT 995 30 100.0 36 .............................. GATTAAGTACTTTTTGCGTTTCAGCTTTTACTTTTG 929 30 100.0 35 .............................. TATTCTTCTGCAACACGCATTAAAGCGCCCTTGCA 864 30 100.0 36 .............................. AGTTTTAGAAGCATTAAACGGGACTGAATACAAAAA 798 30 100.0 36 .............................. TTGGTTAATCCTCTTTCATCTGTAAGATATCTAAGA 732 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 38 30 100.0 36 CCCTTAATCGCACCATAGAGGAATTGAAAT # Left flank : CCGGAACCCATATCGCCTACCTCCACACCTGTCATGGGAAACTTTGGCTTTTGACATTGGGGAAAAAAGAGTGGGAAAAATGCTGAAGTTGTGCAGGCAGTATTTAAATTGGATCCAAAATTCAGTTTTTGAGGGAGAGATCACGTAGGTTTAGAACAAGGAACCCCTTATCAAAGCCAAAAAAATCATGGTTGAGGAAAAGGACAGTTTTATTAATTTTAAAAGCAGGGAGGAGAAATGGTTGGAAAAAGAAGTGATCGGGCAGGAGAAAAATGATCTGGATACCTTTCTATAGTTGTCAGTAAAGATATATTTTTTGAAAAATGATGTAATTAAGCTGAGGGAAAAAACATAATCATCAAGTAATCAGACCATTATAAAGTTGTCGAACCTAGGGCAAAAACCGGCTATAGAAGAACGACGATAAAAAGGAAAAATTTCACTATATTGAACCGCCACCGGGATCAACTGAGGCCGATTTTACCCCCTGAACCCGGCGG # Right flank : GAATTATGACGAATACCTTCTACATCCTTTAATCGTACTTAGCATAAAGTGATTGGGGGCTTTATTTTTTTAGTAAGAGGTATTGGTTAGGAGTGGGAATCTTATTTATGTGGCTTCCATACTGACCTTCATTGCGAGGAGATGGGCAAGTTCTTTTGTTTAATACGGACCATCAATCCCCGAAGCAATCTCATTTACGATGTTTATAATTGAAGCCTCTGAAAGTAGATTGCTTCGCCTGATGAATGCACTGCCAAGAAAAATATACACAGGATCAGGCTCGCAATGACATGTAGGTGAGAGGCTTGTCATTACAGGTTGAATTATAGGGATTTCTTCTTGCGTCCCTTGGGAGAAATGGTTAAGGGGTTATGGGTTAAAGGATTAAAAAAGGGAATGGCTATCGGATAAAATTAAACGGATTTGGGGCATTTAACCCTTTAATATTCCGTACCTACAGCACGGGTTCCATTATTTATGGTAATTTTCTACAAATATTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTTAATCGCACCATAGAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA //