Array 1 8693-9375 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUIY01000027.1 Ruminococcus sp. AM32-17LB AM32-17LB.Scaf27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 8693 30 100.0 36 .............................. ACAGGTAAGCAGATTTTAAAATTTTTGTTCTGAACA 8759 30 100.0 35 .............................. TTTTACAAAAATGATGTCTTAGTAAAATATATCCA 8824 30 100.0 35 .............................. TTCACATCATTATCAACTTTTCCCACAAGGGCATC 8889 30 100.0 36 .............................. ATTTTCAGTGCAAGGTTTTTCGAAAACAGTGGCGTC 8955 30 100.0 35 .............................. ACAACACCAGTCACATTTCTGTGCATCTGTTTGAA 9020 30 100.0 36 .............................. AGTCCTGACTAATGTTGTAGAATAATGCTACATCAC 9086 30 100.0 34 .............................. CAAAATTCAATTGTTTCAATATTAAAACTTCCTT 9150 30 100.0 35 .............................. ACTAACGGTAAAATCCCAAATCCACCATCAATAAT 9215 30 100.0 37 .............................. TAGACCGAATTAACAAAAGAATAAAGAAGAAAATTTC 9282 30 100.0 34 .............................. TAGGAATTGTCTCGGGTGATACGTTTTATCACTC 9346 30 96.7 0 .............................G | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 99.7 35 ATTAAAGTAGAACCATATTGGAATGTAAAT # Left flank : TTTAAGTGAGACGATTATTCCTGAAACAGTATATGAAAAATATAAAGAAGAAATAGATACTATATCTCAGAAATTAAATTCAGAACGATTAACTGCGATTGAAAGAAAATGTTTAAGAAGTAATATTTTGCAGTATTCGCTTGAAATTCCATATTATCACTGGAACTCTTATGAAAAGGCTATGAAAAAAGGATGTGTGCATCAATATCAATCAATTAATCTGAGTCCAGGCGAAAAAATTAAAGTTATGCAATGTCGATATGATGAAATGGGATATTATAAAATTGAATTTGTAGATGATGTAGATTAATAATGAAAAATTCTGTCGATGTTCGATAAAATAAAAATGCGAAGAGGTCGACAATGGTATGTAAATAAAGGGAATGAGTGGTTTTTTGATGAAAAACATGATAAAATGAATGGGAAAATAGAACAGATATAGTGAAGTCGACAAAAATGAGCAAATATGCATAAAAAATATGCGGAACTGACAGCTATGG # Right flank : GAAAATCACAAGCAAGGCTACATATCTGACAAAATATATTAAAGTAGAAATTGGAATTATATAGATTCTTATGTTAAAATAGTTCTTTAATTGATACAAACGATTAATTTTATTTAAGCCAATATGCATACATCAATTCATAAAGAAAAAGGAGTTTTTAAATATACTATGGAGAAACTTGTCATTGGTATCCTTGCCCACGTAGATGCAGGTAAGACTACGTTGTCGGAGGGGATTTTATATTTAACGGGAAAAATCCGTAAGCTGGGGCGTGTGGATCATAAGGATGCGTATCTGGACACTTATAACCTGGAGCGGGAGCGCGGAATCACGATTTTTTCCAAGCAGGCGGAGTTTGAACTGGGAAACAGGGGGATAACTTTACTGGATACGCCGGGGCATGTGGATTTCTCGGCGGAGATGGAGAGAACACTGCAGGTTCTGGATTATGCGATTCTTGTGATAAATGGTGCAGATGGCGTGCAGGGACATACCATGAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAAGTAGAACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 140325-139168 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUIY01000004.1 Ruminococcus sp. AM32-17LB AM32-17LB.Scaf4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 140324 32 100.0 33 ................................ GTGTTTATTGTTTGCAAAAATAATATGCTGAAT 140259 32 100.0 33 ................................ AAAATGCTATGTGTGCCTTATCAACGAGATTTT 140194 32 100.0 33 ................................ TGCTGTAAGGGTTGCGCTTGCTGCTACACCTCC 140129 32 100.0 37 ................................ CCAGACAGTAGAAGAACTGACGGAATGTCGTAGTTCT 140060 32 100.0 35 ................................ TCAGAATGTACATGGATGGGGATTATGTGCAGGCG 139993 32 100.0 35 ................................ CATTTAACCAGGCAGCAAGTGCTTCCCTGTCCTTA 139926 32 100.0 35 ................................ AGCTGCAAGAGCTGCTTTCTTTTCTTTTCGTTTTG 139859 32 100.0 33 ................................ TACAGGTCTGCGCTTATCATCGTCTGCTTCTCC 139794 32 100.0 36 ................................ ATCCAAGAGTTCTGGATGATCCTCCCACGCTTTTGC 139726 32 100.0 33 ................................ CAGAGAACAGAATTTGATGTACCATCAATGAAA 139661 32 100.0 33 ................................ CCACATAGTTCCGAATAGGTTTACTCCAGCTGT 139596 32 100.0 34 ................................ AAAAAGTTCTGTATTAATATGCTGATGGAGCTTC 139530 32 100.0 34 ................................ AATTCCGATAATCACATAAGCGTAATCATTTGCC 139464 32 100.0 35 ................................ AACTTTGCGTTGTCCAGACGGTATCCTGCACCTTT 139397 32 100.0 34 ................................ ACGAGGCTTCTGGCCGTATCAACAGAAAAGAACT 139331 32 100.0 34 ................................ TAGGATCATCTGACAGCGTTCTCTCCGGCAGATT 139265 32 100.0 34 ................................ TATTGTAAGCCTTTACGGTATAGGTGTATTTTTA 139199 32 96.9 0 ...........................A.... | ========== ====== ====== ====== ================================ ===================================== ================== 18 32 99.8 34 GTCACTCCCCTTGCGGGAGTGTGGATTGAAAT # Left flank : AAAAGATGCTTGTTTTGATAACCTATGATGTGAATACAGAAACGGCAGCCGGAAAAGCAAGATTACGGAAAGTAGCTAAACAATGTGTTAATTATGGAAGACGTGTCCAGAATTCAGTTTTTGAATGCATCTTGGATAGTGCACAATGCGTTACCCTTAAGGCTGCTTTGGCGAATATTATTGATGAAAAGACAGATAGTTTAAGATTTTATTATCTGGGAAATAATTATAAATCTAAAATAGAGCACATGGGAATAGAAAGAGGAATATCAGCAGATGATATGCTGATATTATGATGAAAAAAGCTTGTGAAGTTAATTAGGAGATGTGCGAATGATAAGAACACATAAATTTCCTAGAAGACTCGCACTAGAAAAAAATAATTGTTATCTGATAAATGGTAGCATATAATTATTTGTGTCAGTAATTACAGGTGATTTTGAAATATTGCTTTGGCTAATAATAACAAAATTCAAATGTGATTATTAGCAAAAATTGCT # Right flank : TTGAGGAGATGATAAATTGTTTCAAAATTATGGGACGTCTATGGAGATGTTATTTAAAGGGATTTTGATGCTTGCAGCCTGTTCGGGGTGTTATCTGGTTTGGTGGGGTGTGGCTTTTTATCCGGAGAGACATGTTCCGTTGTGGCTGTCGGGAATTTTGCTGGTGGCGACGGCGGCTTGTGGGATTATGGCGGTAAACTGGATGGCGCAGGGCATTTTTCAGGCAGAGAAGGTGCGTGCAGGAATTCCTGGTGGATGGATTCTGGCTGGTGGTGTGATTGGTTATGTTGTTTTGTTGGTAATCAGTAATATTATTTTTCATCGTATGGTGACGACGGAGTTGTTTCTGATTATCGGATGGGCGGTTTTGAATCTAGTCACAGTTGATACGCTGTATGCCAGTGGATTATTTTCAGCTGGAGTTTCTGTTGCATTTGTGGTGTTGACCTTAGTTGTGGTTGTGGCGAGTTTGTATTGTTATATGATTTATTATGAGCTGG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCTTGCGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.90,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : NA //