Array 1 17661-17103 **** Predicted by CRISPRDetect 2.4 *** >NZ_NVPC01000008.1 Bacillus toyonensis strain AFS089607 AFS089607_120_A2_Contig8_140618, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ============================================================== ================== 17660 22 95.7 43 ..................-.... ATTCTGAGGTGTTCTGTGATTAATTTAGACATGTATGTTCAGT 17595 23 100.0 42 ....................... CTTTGGCCGTTGAACCAATTAAAAACCCGATTAAAGTTTAGT 17530 23 100.0 44 ....................... TGGGGAGAGTGCGCAAAGTGTTTTTGTAGATTAATTTGTTTAAC 17463 23 95.7 62 .......C............... ACTCCTTAAATTCCTTTCGCTACGCTACGCTCTAGTAACCACCTAACTTGTGAGTGTTTAAC 17378 23 91.3 43 .G..G.................. TACTAATGGTAAAACAAAACATAGCTTTAATGCATGATTTGAC 17312 23 100.0 43 ....................... TTTTATGCTCATCGCATAATTCAAGATGAAAAGGCGGTTTAAT 17246 23 95.7 31 ..C.................... TCGGTTTGGCATGAGCCATACAGAAGCTGAA Deletion [17193] 17192 23 87.0 44 .AG..T................. ACTAGCCTATCTTAAAGTATTACTACCCTCTATATCAGTTTAAG 17125 23 91.3 0 .............A......C.. | ========== ====== ====== ====== ======================= ============================================================== ================== 9 23 95.2 44 ACTAACATAAGATGTATTTAAAT # Left flank : TGTAGTCAATGCGGATATATTTGTAAAGAAAATCGTTGTACACAAGCGGTTTTTGAATGTAAGCAGTGTGGATATAAAACACATGCTGATTATAATGCGGCCAAAAACATTGCTACTTATGACATCGAAAATATTATAAATAAACAATTAGCGGTACAAAGCAAATTACATTCAAAAAAATGTATGGAAGAGTATATAGAAGAGTTAGGATACCTGGATTAATGTAGATAATTGAGTTCATATTAAATAATTTGGTGGATTTACACGCCATAAATGGAGAAGTAGCACATAAGAAATTTACCAAGTGCCAACACTCCGTAAGGTAGTATCGAATGTAAATAAACATTGATGCGTGGGCATTTTTCATGCTCTGAAGGGTGTAACACAAAAACCGTTACACGATACATCTAGTTGTTGGTAAAATAATGTTTAATGTTCATCTTACCAGGTTATTTTTCGTATCTGTTAAAGTATCTATCTTTATTTTATCGGGGTTTAGT # Right flank : GTGTTTACCCAAAGTATTAAACTAAGTTAAGAATGTATACTGATCCCCTTCACAGATTGTGAAGGGATTTTTATTCGAAAGATGAGTTTTACAAAAGATACAAAATGTTAAACTCATAAGAACCAGTGATATCATGCGTTTTTCTATGGTATTACTGGTTTTTTTCGCTATAAAATGAAAAGAAAAAGATTGTCAGTTTAACAAAATATAGTTATAGTTAAAGTAAGTTTTACATATTATAGGTAACAGCATCGAATTAGGAGGTCGTGTTTTATGGCGAAAGGAGGACGAAAACCTGGATCAAAAGAGCCAATTCGTTCATTAGAAAAGATTGAACAAATGAAAGATTGGTTATTACAAAATTCCTCATATCGAAATTACTTTTTATTTTACTTTGGAATTAATACAGGTTTACGTATCAGCGACATTTTACGATTACGTGTAAAAGATGTTCGTGGAAAAGATGTCATGAAAATTAAAATGGAAAAAACAGATACAAC # Questionable array : NO Score: 5.41 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:-0.19, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.61%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //