Array 1 43-204 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANAQ01000116.1 Weizmannia coagulans H-1 contig000116, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================= ================== 43 32 100.0 33 ................................ AAGTCATATACACCGACATACCCGACAATCAAC 108 32 100.0 33 ................................ GCTACTAAATCTAAATGTCTCGGATGCTCTGAA 173 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================= ================== 3 32 100.0 34 GTCACACTCCTCGTGAGTGTGTGAATTGAAAT # Left flank : ATTGAAATAAGGGTTAGATTTCGGTCCATGCATGCCTGACTCG # Right flank : AAGGGTTAGATTTCGGTCCATGCATGCCTGACTCGTCACACTCC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACTCCTCGTGAGTGTGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 3983-3689 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANAQ01000125.1 Weizmannia coagulans H-1 contig000125, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 3982 32 100.0 32 ................................ AATCCCGGTCTTTCACGGGCCCGTAAATCTGC 3918 32 100.0 34 ................................ AGATTGTCGATTTCGAGATGCAGCCGGAATTAAC 3852 32 100.0 34 ................................ GCCTGGCTTGATAGTGACATCTTCCACAGCGACA 3786 32 93.8 34 .....................G.G........ CAAACGGGTTATCGGTAAAATGGCTGACGGCGGC 3720 32 84.4 0 ............A.......AGA........A | ========== ====== ====== ====== ================================ ================================== ================== 5 32 95.6 34 GTCACACTCCTCGTGAGTGTGTGAATTGAAAT # Left flank : ATTGAAATAAGGGTTAGATTTCGGTCCATGCATGCCTGACT # Right flank : AAATAAACGCAGCAGGAAACAATGGAACAGAGCCGAACAGTCACTTTACGCATGAAATAATTGTGAAAAAGGAGAGATCCGGGGGCGTAATCAGTGATATTCTATCCAAAGAATAAATTCGTTCGTTACGCGTGTCCCGGCGTTAAGGCGTCAAGCGTGAACCATGATTCGTTCGCAACCAGTTGTAAATAGTGAGTGTCAAGCAATTTGATATGCTCAAATCTAAGCAGCAAGCCCCCAGATCTCCTTTTCCTTGCCGGCATGAGATCCGGCGGCAAAAGGCGGAATCCAAGCTCCGCCCCTTGCCGCCGGGTCTCATGCCGGGTGTTTACTGGTACTCCTCTACAAAGTCCAGGTCAACCGCTGCGTTAAAATTGGCTTTATCAATCAGTATCGACAAACGGTTGGCTTCTTTTTCGGTTTTTTCAGCCTGCTTTTTAACCGCAGGGGGGTCAAAAAGCGCTTTCTTGTAGACAACATTTGCGTCAAAAGCGCCTCTT # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:0, 3:3, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACTCCTCGTGAGTGTGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.50,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 1 74-2139 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANAQ01000203.1 Weizmannia coagulans H-1 contig000203, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 74 30 93.3 37 TC............................ GTTTGCATTTGTTTTTGCCAAGACCAAACAAGATGCC 141 30 100.0 37 .............................. GGTTGACATTTTTGATGCCGTTAAGGCTTTTTAACCT 208 30 100.0 36 .............................. GCTGCCTTTGCTGCGGAATCTCCGACTTGTGCCGCT 274 30 100.0 36 .............................. GCCTTTTCCGCTCCTGTGGAAGCCACATGTTTGCAT 340 30 100.0 35 .............................. ATAGCGATTACTAACAAGCGGCCGCGTGCCGCTTC 405 30 100.0 36 .............................. GTTTTATATCCAAAAAATACGCCTTCCATTTTTTTA 471 30 100.0 36 .............................. AGGGATCCAGCCATTTTATTTTCAAGCCTTTACAAC 537 30 100.0 37 .............................. ATCAGCTTGCGAATGACTTCACTGCCATTCACCATCA 604 30 100.0 36 .............................. AATGTAAATTTGCCTTTTAACAGGCCAAGATAAAGG 670 30 100.0 35 .............................. TTTTTGTTTCCTCCTAATTTTTATGCGTTTATTTT 735 30 100.0 35 .............................. ATGGGAAAAACTTTAAAATCTTTTTTGGGCAGGGC 800 30 100.0 37 .............................. CCAATGTGAGAACCCAATTGTTAAGAAGTGTATTGCT 867 30 100.0 36 .............................. TGTTAGGAGCCACGACGTCCGTCCGCCCGGCTTCTT 933 30 100.0 36 .............................. ATAGAAGGTGGACGGGTTAATCTTACAGGAGCAACT 999 30 100.0 36 .............................. AAGTCATCCTTAAATTCGATCACCGCAATTTTATCT 1065 30 100.0 35 .............................. ATTTCAGACGGGTGCTTGAATTGAATATGTTTCAA 1130 30 100.0 36 .............................. GCGCAGTTTCTGATATAAACGTATAGGCGCCGTTAC 1196 30 100.0 36 .............................. CCGCGAGATTACCGACATCATGAACGTTGTGTCGGA 1262 30 100.0 35 .............................. AACTTGCCGATCGAGGAAATGGCGGCCGTGTTTGA 1327 30 100.0 36 .............................. ACGACTTAGAGGACGCTCGTCCAGGCGGAAACGCGG 1393 30 100.0 35 .............................. TTCAATGTGTAGCAGCGTTCAGCCCGCATTTTCTC 1458 30 100.0 34 .............................. TCGTCAGTTTACCCGTGATAGCCGGGCGTTAAAC 1522 30 100.0 35 .............................. TGATCATTCGTAATTGTGTAATGCCAACCTATCGC 1587 30 100.0 36 .............................. TGGTGGCGATCTTGTGGACGGGGACGAGCCAAAAAA 1653 30 100.0 35 .............................. AGCTGGACGAAATGCACACTTACTTTTAGTTGTAG 1718 30 96.7 36 ................A............. TACCGTAAAGCAAAAAGGCTTTACAGTTGATCACGC 1784 30 100.0 35 .............................. ATCCACGCCCCCAAGTAGGGAGCGACACGCTAGCA 1849 30 100.0 33 .............................. ACAATAAAAGAAAATGATCCAATAAATTCCCCC 1912 30 100.0 36 .............................. GTAGAGTATGGGGCGCTATTAAAACTGCTGTTTCTA 1978 30 100.0 36 .............................. ATCTTAATAGCTTTTAACGTCCCGGACGTAATGCTA 2044 30 100.0 36 .............................. TCGCTGTCGCGCCATAATAACTTGTACCAAAGTAAG 2110 30 93.3 0 ............................GG | ========== ====== ====== ====== ============================== ===================================== ================== 32 30 99.5 36 GTTGAACTTTAACATTGGATGTATTTAAAT # Left flank : AGTGGAATAAATCAACGACCTTTAATTGTCTGGCTGCTTACAGTTTCAGGGGATATAGCATTTTGGCAAGGGCT # Right flank : GCTTGCTGAATAAACAAAAATTCCAGATTTGACAAGGATTTTGGCCACTTTTGTCGAATATAAAGTGTAAGGATTTTATAGGAAACGTGTAAAAAACCTTGCACTTGGAGGCCGTTACGATGTACAAAAAGACCGAACATCAATTAACTTTTGTAGAAGATTTTTTTCTACCATTCGGTGGAAAATTAAATAAAGAAAATCGCTGGGTCCGTCTTGCTGAATTAATCCCTTGGTGGAAGGCTGAAGAAAAGTATGCCAAGTCCTTCAAGAAAAAATTCAAGAGCGAATAGACAGACTTATTCTGTCAGAATTGCTCTTGGGGCTCTATACAAAGAAAGGCTTGGGCTATCTGACCGGGAAACAGTCCAACAGATCACGGAAAACCCGTATTTTCAGTATTTTATCGGATTACCTGAATTCCAGGAAAATGCCCCATTCTATCATTTTCTGATGACTCGTTTTAGAAAACGTTTGGGTGCAAACATCATCAATGAACTGAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACATTGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 112-339 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANAQ01000293.1 Weizmannia coagulans H-1 contig000293, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 112 31 100.0 36 ............................... ACATCCTTTTAAATATGGGTATTCCGGTTCGAATTT 179 31 100.0 35 ............................... TTATTGGAAAAAAGGCGCATGGAACAAAAATATTT 245 31 96.8 33 C.............................. CAGAAGCCAAAGAATTTAAACGTTGGATTACGC 309 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ==================================== ================== 4 31 99.2 35 AATTTAAATACATCCAATGTTAAAGTTCAAC # Left flank : AGGCAAAAAAATCGGGATAATTAATTTTCCAGAGCCTCGCTCAAGTGTATATTTTTATTTTGGCAGAGGCTCTCAACGTGGCATGGTATTACGGAACATATAGCTGTGGACA # Right flank : CGTATGTGAATGCTAAACTAAAGTAGACCATTCTTGCTAGATAAAAATGAACACTTTTACTGAGATATGGGGGCAGGTATTTTGCATTTGATAGGTGTTGCCCCGGGGAG # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATTTAAATACATCCAATGTTAAAGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 17520-20714 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANAQ01000268.1 Weizmannia coagulans H-1 contig000268, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 17520 30 100.0 37 .............................. TACATAAAAGCCCAACTAACTAAGGCTAACAGAACCA 17587 30 100.0 36 .............................. CAGTGCAAGCCAGAGAATCGACACGAGGAAATCGAA 17653 30 100.0 37 .............................. TTGAAATGTTTTGTGATTTGTTTTGCCATCTGCTCGT 17720 30 100.0 36 .............................. TAAAGCGAATGTATTTGTTGCTGATGAAGTTGGGGC 17786 30 100.0 36 .............................. ATCTTTTGATCTTAATGAAGCTCAAACTGTTTTGAC 17852 30 100.0 36 .............................. AGAGATTTGCAGACATTAATATCAGACGAAAGATAA 17918 30 100.0 37 .............................. TTGACTAGCCGCATTATGTTTTTGGACTTCTAATAAA 17985 30 100.0 37 .............................. GTGATGTACCTGCGTCTTGTCCTTTCAAACCGTTTTG 18052 30 100.0 36 .............................. GCAATTTGTGCTTTTAGTCTTTCGATTTCAGCCTTA 18118 30 100.0 36 .............................. GGAGGAAACAAGATCTCAACTTTTGAGCCTAACGGA 18184 30 100.0 34 .............................. CTGGATAATAATGATGTTCCATACGGTAACCATC 18248 30 100.0 36 .............................. TTTCGCTTTTTACTCTTGCCACCGTTCCAGATGGCT 18314 30 100.0 36 .............................. CCCGGTCAATGGTAAATACATCCCATGCGTCTTCCT 18380 30 100.0 37 .............................. ATTGTTAGAAGCATTTAAAATTGAGAATGAAAAAGGG 18447 30 100.0 35 .............................. ACGATTGTTATGGGAAGAAAATGCTTTGAATCAAT 18512 30 100.0 36 .............................. CTACAGAGCACAGCCGACAAGGTTTCAGCCGCTGGT 18578 30 100.0 36 .............................. TTTGTTTCCTCTCATTTCTTTTTTCACAATCTCGTC 18644 30 100.0 35 .............................. ACAAATCTTTCGTTATCCTTTATAGAGATAAAAAC 18709 30 100.0 36 .............................. AAATATATGAATTATAATTATTTAAAAATTTTTCCA 18775 30 100.0 36 .............................. TTCAAAAGGGATAATATTTCCGTAACCGATGCGGCA 18841 30 100.0 35 .............................. GAAGAAGAATTAATAAAGGTGTTTGAAGCTAACGC 18906 30 100.0 36 .............................. TCTCCATCTACAAGGTCGCCACCGTGAACAACAAGG 18972 30 100.0 36 .............................. TCCATTACGGAGGTCTTAAAATGAGCAAAAAATACA 19038 30 100.0 36 .............................. CGGCTTAGACCCATCGGCGACAATTCCCGTCGATAA 19104 30 100.0 36 .............................. TTCAAAGGGGAGTCGGTTAATACGATGATTGCCAAC 19170 30 100.0 36 .............................. TGCCTTTGACATAATCTTTTTCAGCTTGAATGTATT 19236 30 100.0 36 .............................. TTGGTAATCATCAAATTCTCCTTTCGCTTTTTAATT 19302 30 100.0 36 .............................. TAGGAACATTTTTCCAGCAGTTGAAGAACAAACACA 19368 30 100.0 35 .............................. AAGTCCGCCATGCGGATTGCTGAGTCCTCTGTTGA 19433 30 100.0 36 .............................. TAAATTTCGCGACCGTTCTTGTCTTTGAGGCCTGTG 19499 30 100.0 36 .............................. CTATAAACCGGATCACTGGTTGTTCCTTTTGGTTTC 19565 30 100.0 36 .............................. GCGGTCTCCACGCCGAATCCGTAAAAGCCTGGAAGC 19631 30 100.0 36 .............................. AAATGAGGAATATACATGTTTGCCAAAAGGTTAAAA 19697 30 96.7 36 ..............A............... GATATAAACTTTGAAGAGCAGAAGATCAAAATTGGG 19763 30 100.0 37 .............................. ACTCTTTTTCCTCGAAACTTTATTTCTCTCATATTTT 19830 30 100.0 35 .............................. GCGAAAATGTACACGGCTACGGAGCCAAAGGCGGT 19895 30 100.0 36 .............................. CACCATTTCCGCCAAACGGATACTTCATGCTCGTAT 19961 30 100.0 36 .............................. CGAGCTTTTCGACTTATATCATCCGTACATCGGCGA 20027 30 100.0 35 .............................. ATCGTTGCACCAGCCACGGATGCAGCTAAGTTTTT 20092 30 100.0 36 .............................. AATATGCCACGTTTTGCATATGGAGCGTGCTGCGGC 20158 30 100.0 36 .............................. TACTTGGCGATATATGCGGCCACCGCGGCCAGCTTT 20224 30 100.0 35 .............................. ACAATCTCGTCCACATTGTTTTTTAGCTCTTCTTC 20289 30 100.0 37 .............................. TACCAACACGGGCAAACTCTCCAAAAATCCCGGTTTT 20356 30 100.0 36 .............................. GCGGCTGAAAAGTAAGACTTTGTAACATCTGGATAG 20422 30 100.0 36 .............................. TTTTCCCTCCTTTCTATGTCTCTATTATATATCGCT 20488 30 100.0 36 .............................. TACATAATGTTGTGATATTTATCGCCATTAAACACG 20554 30 100.0 37 .............................. ATTAGTCCATTGATAAAGCCGTCAATGTCCTTTACAG 20621 30 100.0 34 .............................. ATGCTTATTCAACATCATGAAGGATTTACATAGT 20685 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 49 30 99.9 36 GTTGAACTTTAACATTGGATGTATTTAAAT # Left flank : CCCTTTTAATGCAAAGGAGATGGTATAGTGGGGGCAAAAAAGTCGCTTAATTTTAACTATGTATTTTTATTTTATGATATAAACGAAAGAAGAGTACAAAAGGTTTTTAAAATTTGTAAAAAATATTTATATCATCATCAAAAATCTGTTTTTCGCGGTGCTATTACACCATCACAGCTAATTTCTCTTAAAAAAGAGCTTAATAAAGTAATTCATAAAGATGAAGACTTCATTTCTATTGTTAAGTTTTTAAGTGAGTTCTACTTTGATGAAGAAACAATCGGCAAAAACCCGGGAGATGGAGAATCGATATTTTTATGACTCACTTTTTCCCAACCGAATAAATACGGCACAACTGGCGATCACTTGGTATAAAAGGCTTCTGAGGGAATTTGGATGGACATATCAAAAAAACGATAACGGTTGGGAAAAAACAAACAATCCACTTGTACCAAAGTCTCTAGCTGAGGTATACTTGCAGTAAGTGTTGAAAATACTGG # Right flank : TTGCTGATTGGCGTGCCGTTTAGGATGAGCCTATACGGTGTAGCCGTCAAGTAAAATTGAACACTTTTTGCTAATTAATTTTGAACACTTTTTTCCATAAAAATGGATGATCGGTGTTTCATGCGATAGCTGTCATCGTTCCTGAAATGGATGACTTCTGCGCGGTGTAACAATCTGTCCAGAATAGCTGTCGTAATGCCCGGATCCCCCAATAGTTCACCCCATTCATTCGGTCCCTTATTGGAAGTTAGAATAACAGAAGCATTGTCATATAAGTCGTTAATTAAATGGAAAAACAGATTTGCCTCTCGTGAATCCATGGCCATAAACATCAAGTCATCAATGATTACCAGGTTCGCATCACGGATGCGCTTCATTCTTGTCTGTGATTTTCGGGTGACATCTTCCGTCTTCAACGTTTGGATAAGCTGCCCCATGGAGATAAAAGAAACTTTGTAGCCCTGATGAATTGCCTCTATCCCTAATCCCGTTGCCAAATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACATTGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 9436-9599 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANAQ01000049.1 Weizmannia coagulans H-1 contig000049, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 9436 32 100.0 34 ................................ ACGTAATGGCTCATGGCCTGACGCTGTACCTCCG 9502 32 100.0 34 ................................ GCAACTTTTTTCGCCGTAATGATCTGTCATCCGC 9568 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 3 32 100.0 34 GTCACACTCCTCGTGAGTGTGTGAATTGAAAT # Left flank : ATTGATCAACATAAGGTTGCAAGATCATATAAAGATTATGCCGTCGTTTTTGATGAAAAGATGCCAGAGGGAGTAACACTGCACAAAATTGCAAATTCCTTTAAAGATGCTAAAGTTGTCAACTGAGTTGCTGTTTTTGGATACGGATCCTTTCTTCAGTGCCGTTCTTTATTGAAGGAGAAGCTTAACAGAGGCTTATAACCTGTAAAACATAAAAACCATTAGAAATAGTTTAATGTTAATTGCGTTACGACCGTGGACTATGATGTTGCTGCGTTTTAACACTCTGTTTTATGCAAAATAGCAGCCTTGTAATGAGAATTGCTTTTTGGCGCAACTGTGCGAATGGAGAGTATACATGAATTTCCCGTGGGATTCGCACCAGGAATCCCCTTGCTTTTTTCCAAATTACGGAATTTTTGCATGGATAAATTTAGAATAATATGGAAAAAAACACAGTTATTCGTCAAAAAACATCAAATTTCTACAAGGTTATAGCT # Right flank : AAGGGTTAGATTTCGGTCCATGCATGCCTGACTCGTCACACTCC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACTCCTCGTGAGTGTGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : NA //