Array 1 4802631-4803839 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP059997.1 Amycolatopsis sp. CA-230715 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 4802631 37 94.6 39 ..............T.C.................... AACCAGGCCGGGGCGACTGCCGCGCGAGGTCTGCAGGAG 4802707 37 94.6 36 A...............C.................... CCGTTCAACGCGGGCATCATCCAGGCATGGAACACG 4802780 37 94.6 36 ........A.......C.................... TCCATCTACGGCGGCCGTACGCTTGAGGTTTACCGT 4802853 37 100.0 36 ..................................... ATTGCGGTGACGGTGATCTTGCCGTGGAGGGGGAAT 4802926 37 97.3 38 .....................T............... AGGACGCGGGCTTGGCCTTCCACGACATACCCGAGCGG 4803001 37 100.0 36 ..................................... GTTGGCCAGCAGGGAAGTTCGGTGCGGCATGCGGTG 4803074 37 100.0 36 ..................................... GTCGGGCTCGTCGACCGGTTGGCTGGATTCCGGGGC 4803147 37 100.0 36 ..................................... CCGAGCGGGGAGAGCGTCTCCCCGACGGTTTCCAGC 4803220 37 97.3 35 ...............T..................... GATACCCACCCTAAAGTTTTCGACGCACCTGATTG 4803292 37 97.3 36 ...............T..................... GGCCAGCTCCAGCAGTCGCCAGCCCGCCGCGAGCGC 4803365 37 100.0 37 ..................................... CAGGCGCGCGGATGGGTGCTCGACCAGCACGGCCGCG 4803439 37 97.3 34 .....................T............... AACACCGAGGGTGCGCAGCTGGCCTGCAGCGCCT 4803510 37 97.3 36 ..........G.......................... GTCGACCGGTTCGGGCCGACGCAGCAGACCGTCGAC 4803583 37 97.3 36 ...........G......................... GACATCTGCGTCGAAGCCGGGTGGATCACCCCGAAA 4803656 37 97.3 35 ...................A................. TCGCCCCACTCGATCCACCAGGTGTGGCAGATCCG 4803728 37 97.3 38 ............T........................ ACCGGAGCGCTGACCGAGGTGTTCCCCGCCGACCAGGT 4803803 37 94.6 0 ...........................C.......G. | ========== ====== ====== ====== ===================================== ======================================= ================== 17 37 97.5 36 GTGGCATCGGCCCTCCGGGGCCGATGAGGATCGCAAC # Left flank : GACATCGACCGGGGTGAGAGCACCGAAATGGGCGGGAAGTGGACCGTTCCCTACGGGCTGTACAAAGCCGAGATCTACTACTCCGCCACGCGCGGCGGGCAGACTGGGGTCGACAGCCGGGACCTGGAACTGCTTTACCGCACCCTGGAGATGATGTTCGACCACGACCGCTCAGCCGCCCGCGGCACGATGACCGCCCGCGGACTGTACGTCTTCAGCCACGACAACACCTTCGGCAACGCCCCGGCGCACAAGCTCACCGAACGTGTCACCGTCAGCCTCGCCGACCACGTCACCGGCCCGCCCCGCTCCTACGGTGACTACATCGTCAACGCCGCCGCCGACGACCTGCCCCGCAGCGTGACGCTGGCCAAACTACTGGCCTGACCGCCATGGACGAAACACGGCCCGCCGACGTGGAATGGGCGAGCATCCCGATCTCGGCGATCGAGCACTACGCCTACCTCGCCCCCGAGGACGAGCTGAGGCGTTCCTGGCCG # Right flank : CCGCGCTGACGAGTTCGGGTTGTCCAAGGCGGCGACGGCGGAGGGAGACTGCAGAGGTCGCAAACTCGTCCCGATGGGGCGCCTGTAGGTGTCGTGGGAATTCGCTCGTTTCCACAGCTATGCGGGTCCCTCACCCAGATGGCGGAGCAGGGGATCACAGATCCCCAGCACTACCGCCTCCAGGTCGCTCTCCCACACTTCAGGCAGCCTCGATAGAGGCAAAAGCCCAGTTCAGACGGCATTTGCCGGTCTTGGGAGCACGGCAGGAAGAACGGAGACATAACGGAGCCCAGACTGGCCGTTAACAGTCGCAAACATGATCTTGAAGTCGACGAAACCGCAGGTAGAAGCCCTGTAAGCGAAGGCTATTTCAAGATCATCGCGATCGAACACGTGGGCTTTTAATCCCTGGGTCCAGGGTTCGAGCCCCTGGCGGCCCACAAACCGCCTGGTCAGCAAGCATATTGCTGGCCAGCGCTCGGACCGGAAACCCGGTTTCG # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCATCGGCCCTCCGGGGCCGATGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-16.80,-14.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [7-7] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [30.0-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA //